Literature DB >> 22753822

Coherent nonlinear optical studies of elementary processes in biological complexes: diagrammatic techniques based on the wave function versus the density matrix.

Jason D Biggs1, Judith A Voll, Shaul Mukamel.   

Abstract

Two types of diagrammatic approaches for the design and simulation of nonlinear optical experiments (closed-time path loops based on the wave function and double-sided Feynman diagrams for the density matrix) are presented and compared. We give guidelines for the assignment of relevant pathways and provide rules for the interpretation of existing nonlinear experiments in carotenoids.

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Year:  2012        PMID: 22753822      PMCID: PMC3385674          DOI: 10.1098/rsta.2011.0219

Source DB:  PubMed          Journal:  Philos Trans A Math Phys Eng Sci        ISSN: 1364-503X            Impact factor:   4.226


  24 in total

1.  Femtochemistry: Atomic-Scale Dynamics of the Chemical Bond Using Ultrafast Lasers (Nobel Lecture) Copyright((c)) The Nobel Foundation 2000. We thank the Nobel Foundation, Stockholm, for permission to print this lecture.

Authors: 
Journal:  Angew Chem Int Ed Engl       Date:  2000-08-04       Impact factor: 15.336

2.  Femtosecond Time-Resolved Stimulated Raman Spectroscopy of the S(2) (1B(u)) Excited State of beta-Carotene.

Authors:  Philipp Kukura; David W McCamant; Richard A Mathies
Journal:  J Phys Chem A       Date:  2004-07-15       Impact factor: 2.781

3.  Nonlinear wave-packet interferometry and molecular state reconstruction in a vibrating and rotating diatomic molecule.

Authors:  Travis S Humble; Jeffrey A Cina
Journal:  J Phys Chem B       Date:  2006-09-28       Impact factor: 2.991

Review 4.  Femtobiology.

Authors:  Villy Sundström
Journal:  Annu Rev Phys Chem       Date:  2008       Impact factor: 12.703

5.  Evidence for wavelike energy transfer through quantum coherence in photosynthetic systems.

Authors:  Gregory S Engel; Tessa R Calhoun; Elizabeth L Read; Tae-Kyu Ahn; Tomás Mancal; Yuan-Chung Cheng; Robert E Blankenship; Graham R Fleming
Journal:  Nature       Date:  2007-04-12       Impact factor: 49.962

6.  Femtosecond pulse sequences used for optical manipulation of molecular motion.

Authors:  A M Weiner; D E Leaird; G P Wiederrecht; K A Nelson
Journal:  Science       Date:  1990-03-16       Impact factor: 47.728

7.  Complete reconstruction of the wave function of a reacting molecule by four-wave mixing spectroscopy.

Authors:  David Avisar; David J Tannor
Journal:  Phys Rev Lett       Date:  2011-04-29       Impact factor: 9.161

8.  Electronic coherences and vibrational wave-packets in single molecules studied with femtosecond phase-controlled spectroscopy.

Authors:  Richard Hildner; Daan Brinks; Fernando D Stefani; Niek F van Hulst
Journal:  Phys Chem Chem Phys       Date:  2011-01-14       Impact factor: 3.676

9.  Inversion of two-dimensional potentials from frequency-resolved spectroscopic data.

Authors:  Xuan Li; Moshe Shapiro
Journal:  J Chem Phys       Date:  2011-03-07       Impact factor: 3.488

10.  Generalized Kramers-Heisenberg expressions for stimulated Raman scattering and two-photon absorption.

Authors:  Oleksiy Roslyak; Christoph A Marx; Shaul Mukamel
Journal:  Phys Rev A       Date:  2009-06-18       Impact factor: 3.140

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  12 in total

1.  Quantum-coherent energy transfer: implications for biology and new energy technologies.

Authors:  Alexandra Olaya-Castro; Ahsan Nazir; Graham R Fleming
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2012-08-13       Impact factor: 4.226

2.  Two-dimensional stimulated resonance Raman spectroscopy study of the Trp-cage peptide folding.

Authors:  Hao Ren; Zaizhi Lai; Jason D Biggs; Jin Wang; Shaul Mukamel
Journal:  Phys Chem Chem Phys       Date:  2013-11-28       Impact factor: 3.676

3.  Double-core excitations in formamide can be probed by X-ray double-quantum-coherence spectroscopy.

Authors:  Yu Zhang; Daniel Healion; Jason D Biggs; Shaul Mukamel
Journal:  J Chem Phys       Date:  2013-04-14       Impact factor: 3.488

4.  Multidimensional x-ray spectroscopy of valence and core excitations in cysteine.

Authors:  Jason D Biggs; Yu Zhang; Daniel Healion; Shaul Mukamel
Journal:  J Chem Phys       Date:  2013-04-14       Impact factor: 3.488

5.  Time-, frequency-, and wavevector-resolved x-ray diffraction from single molecules.

Authors:  Kochise Bennett; Jason D Biggs; Yu Zhang; Konstantin E Dorfman; Shaul Mukamel
Journal:  J Chem Phys       Date:  2014-05-28       Impact factor: 3.488

6.  Probing electronic and vibrational dynamics in molecules by time-resolved photoelectron, Auger-electron, and X-ray photon scattering spectroscopy.

Authors:  Kochise Bennett; Markus Kowalewski; Shaul Mukamel
Journal:  Faraday Discuss       Date:  2015-03-02       Impact factor: 4.008

7.  Two-Dimensional Stimulated Ultraviolet Resonance Raman Spectra of Tyrosine and Tryptophan; A Simulation Study.

Authors:  Hao Ren; Jason D Biggs; Shaul Mukamel
Journal:  J Raman Spectrosc       Date:  2013-04       Impact factor: 3.133

Review 8.  Multidimensional attosecond resonant X-ray spectroscopy of molecules: lessons from the optical regime.

Authors:  Shaul Mukamel; Daniel Healion; Yu Zhang; Jason D Biggs
Journal:  Annu Rev Phys Chem       Date:  2012-12-10       Impact factor: 12.703

9.  Electronic resonances in broadband stimulated Raman spectroscopy.

Authors:  G Batignani; E Pontecorvo; G Giovannetti; C Ferrante; G Fumero; T Scopigno
Journal:  Sci Rep       Date:  2016-01-05       Impact factor: 4.379

10.  Two-dimensional stimulated resonance Raman spectroscopy of molecules with broadband x-ray pulses.

Authors:  Jason D Biggs; Yu Zhang; Daniel Healion; Shaul Mukamel
Journal:  J Chem Phys       Date:  2012-05-07       Impact factor: 3.488

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