Literature DB >> 22753497

Arrangement of subunits in intact mammalian mitochondrial ATP synthase determined by cryo-EM.

Lindsay A Baker1, Ian N Watt, Michael J Runswick, John E Walker, John L Rubinstein.   

Abstract

Mitochondrial ATP synthase is responsible for the synthesis of ATP, a universal energy currency in cells. Whereas X-ray crystallography has revealed the structure of the soluble region of the complex and the membrane-intrinsic c-subunits, little is known about the structure of the six other proteins (a, b, f, A6L, e, and g) that comprise the membrane-bound region of the complex in animal mitochondria. Here, we present the structure of intact bovine mitochondrial ATP synthase at ∼18 Å resolution by electron cryomicroscopy of single particles in amorphous ice. The map reveals that the a-subunit and c(8)-ring of the complex interact with a small contact area and that the b-subunit spans the membrane without contacting the c(8)-ring. The e- and g-subunits extend from the a-subunit density distal to the c(8)-ring. The map was calculated from images of a preparation of the enzyme solubilized with the detergent dodecyl maltoside, which is visible in electron cryomicroscopy maps. The structure shows that the micelle surrounding the complex is curved. The observed bend in the micelle of the detergent-solubilized complex is consistent with previous electron tomography experiments and suggests that monomers of ATP synthase are sufficient to produce curvature in lipid bilayers.

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Year:  2012        PMID: 22753497      PMCID: PMC3406826          DOI: 10.1073/pnas.1204935109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  48 in total

1.  Novel features in the structure of bovine ATP synthase.

Authors:  S Karrasch; J E Walker
Journal:  J Mol Biol       Date:  1999-07-09       Impact factor: 5.469

2.  The modification of the conserved GXXXG motif of the membrane-spanning segment of subunit g destabilizes the supramolecular species of yeast ATP synthase.

Authors:  Diego M Bustos; Jean Velours
Journal:  J Biol Chem       Date:  2005-06-21       Impact factor: 5.157

3.  FREALIGN: high-resolution refinement of single particle structures.

Authors:  Nikolaus Grigorieff
Journal:  J Struct Biol       Date:  2006-06-02       Impact factor: 2.867

Review 4.  The peripheral stalk of the mitochondrial ATP synthase.

Authors:  John E Walker; Veronica Kane Dickson
Journal:  Biochim Biophys Acta       Date:  2006-01-26

5.  Ab initio resolution measurement for single particle structures.

Authors:  Duncan Sousa; Nikolaus Grigorieff
Journal:  J Struct Biol       Date:  2006-08-15       Impact factor: 2.867

6.  Structural analysis of membrane protein complexes by single particle electron microscopy.

Authors:  John L Rubinstein
Journal:  Methods       Date:  2007-04       Impact factor: 3.608

7.  Dimer ribbons of ATP synthase shape the inner mitochondrial membrane.

Authors:  Mike Strauss; Götz Hofhaus; Rasmus R Schröder; Werner Kühlbrandt
Journal:  EMBO J       Date:  2008-03-06       Impact factor: 11.598

8.  Functional analysis of subunit e of the F1Fo-ATP synthase of the yeast Saccharomyces cerevisiae: importance of the N-terminal membrane anchor region.

Authors:  Valerie Everard-Gigot; Cory D Dunn; Brigid M Dolan; Susanne Brunner; Robert E Jensen; Rosemary A Stuart
Journal:  Eukaryot Cell       Date:  2005-02

9.  On the structure of the stator of the mitochondrial ATP synthase.

Authors:  Veronica Kane Dickson; Jocelyn A Silvester; Ian M Fearnley; Andrew G W Leslie; John E Walker
Journal:  EMBO J       Date:  2006-06-08       Impact factor: 11.598

10.  How the regulatory protein, IF(1), inhibits F(1)-ATPase from bovine mitochondria.

Authors:  Jonathan R Gledhill; Martin G Montgomery; Andrew G W Leslie; John E Walker
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-25       Impact factor: 11.205

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  58 in total

1.  Structure of ATP synthase from Paracoccus denitrificans determined by X-ray crystallography at 4.0 Å resolution.

Authors:  Edgar Morales-Rios; Martin G Montgomery; Andrew G W Leslie; John E Walker
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-12       Impact factor: 11.205

2.  Load-dependent destabilization of the γ-rotor shaft in FOF1 ATP synthase revealed by hydrogen/deuterium-exchange mass spectrometry.

Authors:  Siavash Vahidi; Yumin Bi; Stanley D Dunn; Lars Konermann
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-16       Impact factor: 11.205

3.  Two-dimensional crystallization of intact F-ATP synthase isolated from bovine heart mitochondria.

Authors:  Shintaro Maeda; Kyoko Shinzawa-Itoh; Kaoru Mieda; Mami Yamamoto; Yumiko Nakashima; Yumi Ogasawara; Chimari Jiko; Kazutoshi Tani; Atsuo Miyazawa; Christoph Gerle; Shinya Yoshikawa
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-11-29

4.  Age-dependent dissociation of ATP synthase dimers and loss of inner-membrane cristae in mitochondria.

Authors:  Bertram Daum; Andreas Walter; Angelika Horst; Heinz D Osiewacz; Werner Kühlbrandt
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-04       Impact factor: 11.205

5.  Ectopic F0F 1 ATP synthase contains both nuclear and mitochondrially-encoded subunits.

Authors:  Amit Kumar Rai; Barbara Spolaore; David A Harris; Federica Dabbeni-Sala; Giovanna Lippe
Journal:  J Bioenerg Biomembr       Date:  2013-08-13       Impact factor: 2.945

6.  High-resolution cryo-EM analysis of the yeast ATP synthase in a lipid membrane.

Authors:  Anurag P Srivastava; Min Luo; Wenchang Zhou; Jindrich Symersky; Dongyang Bai; Melissa G Chambers; José D Faraldo-Gómez; Maofu Liao; David M Mueller
Journal:  Science       Date:  2018-04-12       Impact factor: 47.728

Review 7.  Opposite rotation directions in the synthesis and hydrolysis of ATP by the ATP synthase: hints from a subunit asymmetry.

Authors:  Salvatore Nesci; Fabiana Trombetti; Vittoria Ventrella; Alessandra Pagliarani
Journal:  J Membr Biol       Date:  2015-02-06       Impact factor: 1.843

8.  The unique histidine in OSCP subunit of F-ATP synthase mediates inhibition of the permeability transition pore by acidic pH.

Authors:  Manuela Antoniel; Kristen Jones; Salvatore Antonucci; Barbara Spolaore; Federico Fogolari; Valeria Petronilli; Valentina Giorgio; Michela Carraro; Fabio Di Lisa; Michael Forte; Ildikó Szabó; Giovanna Lippe; Paolo Bernardi
Journal:  EMBO Rep       Date:  2017-12-07       Impact factor: 8.807

9.  Models for the a subunits of the Thermus thermophilus V/A-ATPase and Saccharomyces cerevisiae V-ATPase enzymes by cryo-EM and evolutionary covariance.

Authors:  Daniel G Schep; Jianhua Zhao; John L Rubinstein
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-07       Impact factor: 11.205

10.  Soluble guanylate cyclase activation during ischemic injury in mice protects against postischemic inflammation at the mitochondrial level.

Authors:  Derek Z Wang; Allan W Jones; Walter Z Wang; Meifang Wang; Ronald J Korthuis
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2016-02-25       Impact factor: 4.052

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