Literature DB >> 17367713

Structural analysis of membrane protein complexes by single particle electron microscopy.

John L Rubinstein1.   

Abstract

Single particle electron microscopy (EM) is an increasingly important tool for the structural analysis of macromolecular complexes. The main advantage of the technique over other methods is that it is not necessary to precede the analysis with the growth of crystals of the sample. This advantage is particularly important for membrane proteins and large protein complexes where generating crystals is often the main barrier to structure determination. Therefore, single particle EM can be employed with great utility in the study of large membrane protein complexes. Although the construction of atomic resolution models by single particle EM is possible in theory, currently the highest resolution maps are still limited to approximately 7-10A resolution and 15-30 A resolution is more typical. However, by combining single particle EM maps with high-resolution models of subunits or subcomplexes from X-ray crystallography and NMR spectroscopy it is possible to build up an atomic model of a macromolecular assembly. Image analysis procedures are almost identical for micrographs of soluble protein complexes and detergent solubilized membrane protein complexes. However, electron microscopists attempting to prepare specimens of a membrane protein complex for imaging may find that these complexes require different handling than soluble protein complexes. This paper seeks to explain how high-quality specimen grids of membrane protein complexes may be prepared to allow for the determination of their structure by EM and image analysis.

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Year:  2007        PMID: 17367713     DOI: 10.1016/j.ymeth.2006.07.019

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  16 in total

1.  Arrangement of subunits in intact mammalian mitochondrial ATP synthase determined by cryo-EM.

Authors:  Lindsay A Baker; Ian N Watt; Michael J Runswick; John E Walker; John L Rubinstein
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-02       Impact factor: 11.205

2.  Gating of a G protein-sensitive mammalian Kir3.1 prokaryotic Kir channel chimera in planar lipid bilayers.

Authors:  Edgar Leal-Pinto; Yacob Gómez-Llorente; Shobana Sundaram; Qiong-Yao Tang; Tatyana Ivanova-Nikolova; Rahul Mahajan; Lia Baki; Zhe Zhang; Jose Chavez; Iban Ubarretxena-Belandia; Diomedes E Logothetis
Journal:  J Biol Chem       Date:  2010-10-06       Impact factor: 5.157

3.  Structure of intact Thermus thermophilus V-ATPase by cryo-EM reveals organization of the membrane-bound V(O) motor.

Authors:  Wilson C Y Lau; John L Rubinstein
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-06       Impact factor: 11.205

Review 4.  Electron cryomicroscopy of membrane proteins: specimen preparation for two-dimensional crystals and single particles.

Authors:  Ingeborg Schmidt-Krey; John L Rubinstein
Journal:  Micron       Date:  2010-07-16       Impact factor: 2.251

5.  Structural flexibility of the G alpha s alpha-helical domain in the beta2-adrenoceptor Gs complex.

Authors:  Gerwin H Westfield; Søren G F Rasmussen; Min Su; Somnath Dutta; Brian T DeVree; Ka Young Chung; Diane Calinski; Gisselle Velez-Ruiz; Austin N Oleskie; Els Pardon; Pil Seok Chae; Tong Liu; Sheng Li; Virgil L Woods; Jan Steyaert; Brian K Kobilka; Roger K Sunahara; Georgios Skiniotis
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-13       Impact factor: 11.205

Review 6.  A helical processing pipeline for EM structure determination of membrane proteins.

Authors:  Lauren S Fisher; Andrew Ward; Ronald A Milligan; Nigel Unwin; Clinton S Potter; Bridget Carragher
Journal:  Methods       Date:  2011-09-20       Impact factor: 3.608

7.  Structure of TatA paralog, TatE, suggests a structurally homogeneous form of Tat protein translocase that transports folded proteins of differing diameter.

Authors:  Jacopo Baglieri; Daniel Beck; Nishi Vasisht; Corinne J Smith; Colin Robinson
Journal:  J Biol Chem       Date:  2011-12-21       Impact factor: 5.157

8.  The use of SMALPs as a novel membrane protein scaffold for structure study by negative stain electron microscopy.

Authors:  Vincent Postis; Shaun Rawson; Jennifer K Mitchell; Sarah C Lee; Rosemary A Parslow; Tim R Dafforn; Stephen A Baldwin; Stephen P Muench
Journal:  Biochim Biophys Acta       Date:  2014-10-23

9.  Ultrastructural characterisation of Bacillus subtilis TatA complexes suggests they are too small to form homooligomeric translocation pores.

Authors:  Daniel Beck; Nishi Vasisht; Jacopo Baglieri; Carmine G Monteferrante; Jan Maarten van Dijl; Colin Robinson; Corinne J Smith
Journal:  Biochim Biophys Acta       Date:  2013-04-06

10.  A saposin-lipoprotein nanoparticle system for membrane proteins.

Authors:  Jens Frauenfeld; Robin Löving; Jean-Paul Armache; Andreas F-P Sonnen; Fatma Guettou; Per Moberg; Lin Zhu; Caroline Jegerschöld; Ali Flayhan; John A G Briggs; Henrik Garoff; Christian Löw; Yifan Cheng; Pär Nordlund
Journal:  Nat Methods       Date:  2016-03-07       Impact factor: 28.547

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