Literature DB >> 22748924

Structure of a glomulin-RBX1-CUL1 complex: inhibition of a RING E3 ligase through masking of its E2-binding surface.

David M Duda1, Jennifer L Olszewski, Adriana E Tron, Michal Hammel, Lester J Lambert, M Brett Waddell, Tanja Mittag, James A DeCaprio, Brenda A Schulman.   

Abstract

The approximately 300 human cullin-RING ligases (CRLs) are multisubunit E3s in which a RING protein, either RBX1 or RBX2, recruits an E2 to catalyze ubiquitination. RBX1-containing CRLs also can bind Glomulin (GLMN), which binds RBX1's RING domain, regulates the RBX1-CUL1-containing SCF(FBW7) complex, and is disrupted in the disease Glomuvenous Malformation. Here we report the crystal structure of a complex between GLMN, RBX1, and a fragment of CUL1. Structural and biochemical analyses reveal that GLMN adopts a HEAT-like repeat fold that tightly binds the E2-interacting surface of RBX1, inhibiting CRL-mediated chain formation by the E2 CDC34. The structure explains the basis for GLMN's selectivity toward RBX1 over RBX2, and how disease-associated mutations disrupt GLMN-RBX1 interactions. Our study reveals a mechanism for RING E3 ligase regulation, whereby an inhibitor blocks E2 access, and raises the possibility that other E3s are likewise controlled by cellular proteins that mask E2-binding surfaces to mediate inhibition.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22748924      PMCID: PMC3477590          DOI: 10.1016/j.molcel.2012.05.044

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  63 in total

1.  Reconstitution of G1 cyclin ubiquitination with complexes containing SCFGrr1 and Rbx1.

Authors:  D Skowyra; D M Koepp; T Kamura; M N Conrad; R C Conaway; J W Conaway; S J Elledge; J W Harper
Journal:  Science       Date:  1999-04-23       Impact factor: 47.728

2.  Structure of a c-Cbl-UbcH7 complex: RING domain function in ubiquitin-protein ligases.

Authors:  N Zheng; P Wang; P D Jeffrey; N P Pavletich
Journal:  Cell       Date:  2000-08-18       Impact factor: 41.582

3.  Structure of the Cand1-Cul1-Roc1 complex reveals regulatory mechanisms for the assembly of the multisubunit cullin-dependent ubiquitin ligases.

Authors:  Seth J Goldenberg; Thomas C Cascio; Stuart D Shumway; Kenneth C Garbutt; Jidong Liu; Yue Xiong; Ning Zheng
Journal:  Cell       Date:  2004-11-12       Impact factor: 41.582

4.  Mutations in a novel factor, glomulin, are responsible for glomuvenous malformations ("glomangiomas").

Authors:  Pascal Brouillard; Laurence M Boon; John B Mulliken; Odile Enjolras; Michella Ghassibé; Matthew L Warman; O T Tan; Bjorn R Olsen; Miikka Vikkula
Journal:  Am J Hum Genet       Date:  2002-02-13       Impact factor: 11.025

5.  Recruitment of a ROC1-CUL1 ubiquitin ligase by Skp1 and HOS to catalyze the ubiquitination of I kappa B alpha.

Authors:  P Tan; S Y Fuchs; A Chen; K Wu; C Gomez; Z Ronai; Z Q Pan
Journal:  Mol Cell       Date:  1999-04       Impact factor: 17.970

6.  Dynamics of cullin-RING ubiquitin ligase network revealed by systematic quantitative proteomics.

Authors:  Eric J Bennett; John Rush; Steven P Gygi; J Wade Harper
Journal:  Cell       Date:  2010-12-10       Impact factor: 41.582

7.  Promotion of NEDD-CUL1 conjugate cleavage by COP9 signalosome.

Authors:  S Lyapina; G Cope; A Shevchenko; G Serino; T Tsuge; C Zhou; D A Wolf; N Wei; A Shevchenko; R J Deshaies
Journal:  Science       Date:  2001-05-03       Impact factor: 47.728

8.  Structure of a beta-TrCP1-Skp1-beta-catenin complex: destruction motif binding and lysine specificity of the SCF(beta-TrCP1) ubiquitin ligase.

Authors:  Geng Wu; Guozhou Xu; Brenda A Schulman; Philip D Jeffrey; J Wade Harper; Nikola P Pavletich
Journal:  Mol Cell       Date:  2003-06       Impact factor: 17.970

9.  NEDD8 modification of CUL1 dissociates p120(CAND1), an inhibitor of CUL1-SKP1 binding and SCF ligases.

Authors:  Jidong Liu; Manabu Furukawa; Tomohiro Matsumoto; Yue Xiong
Journal:  Mol Cell       Date:  2002-12       Impact factor: 17.970

10.  Structures of APC/C(Cdh1) with substrates identify Cdh1 and Apc10 as the D-box co-receptor.

Authors:  Paula C A da Fonseca; Eric H Kong; Ziguo Zhang; Anne Schreiber; Mark A Williams; Edward P Morris; David Barford
Journal:  Nature       Date:  2010-11-24       Impact factor: 49.962

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  45 in total

1.  Control of APC/C-dependent ubiquitin chain elongation by reversible phosphorylation.

Authors:  Allison Craney; Aileen Kelly; Luying Jia; Indro Fedrigo; Hongtao Yu; Michael Rape
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-25       Impact factor: 11.205

2.  Multimodal mechanism of action for the Cdc34 acidic loop: a case study for why ubiquitin-conjugating enzymes have loops and tails.

Authors:  Amy Ziemba; Spencer Hill; Daniella Sandoval; Kristofor Webb; Eric J Bennett; Gary Kleiger
Journal:  J Biol Chem       Date:  2013-10-15       Impact factor: 5.157

Review 3.  The COP9 signalosome and cullin-RING ligases in the heart.

Authors:  Xuejun Wang; Douglas S Martin
Journal:  Am J Cardiovasc Dis       Date:  2015-03-20

4.  FBXO45-MYCBP2 regulates mitotic cell fate by targeting FBXW7 for degradation.

Authors:  Yvonne T Kschonsak; Barbara Vodicska; Kai T Richter; Ingrid Hoffmann
Journal:  Cell Death Differ       Date:  2019-07-08       Impact factor: 15.828

5.  A snapshot of ubiquitin chain elongation: lysine 48-tetra-ubiquitin slows down ubiquitination.

Authors:  Jordan Kovacev; Kenneth Wu; Donald E Spratt; Robert A Chong; Chan Lee; Jaladhi Nayak; Gary S Shaw; Zhen-Qiang Pan
Journal:  J Biol Chem       Date:  2014-01-24       Impact factor: 5.157

Review 6.  Cullin-RING E3 Ubiquitin Ligases: Bridges to Destruction.

Authors:  Henry C Nguyen; Wei Wang; Yong Xiong
Journal:  Subcell Biochem       Date:  2017

7.  The Arabidopsis ALF4 protein is a regulator of SCF E3 ligases.

Authors:  Rammyani Bagchi; Charles W Melnyk; Gideon Christ; Martin Winkler; Kerstin Kirchsteiner; Mohammad Salehin; Julia Mergner; Michael Niemeyer; Claus Schwechheimer; Luz Irina A Calderón Villalobos; Mark Estelle
Journal:  EMBO J       Date:  2017-12-12       Impact factor: 11.598

8.  Cullin RING ligases: glommed by glomulin.

Authors:  Ventzislava A Hristova; Daniel K Stringer; Allan M Weissman
Journal:  Mol Cell       Date:  2012-08-10       Impact factor: 17.970

Review 9.  Building and remodelling Cullin-RING E3 ubiquitin ligases.

Authors:  John R Lydeard; Brenda A Schulman; J Wade Harper
Journal:  EMBO Rep       Date:  2013-11-15       Impact factor: 8.807

10.  Signal-induced disassembly of the SCF ubiquitin ligase complex by Cdc48/p97.

Authors:  James L Yen; Karin Flick; Christie V Papagiannis; Radhika Mathur; An Tyrrell; Ikram Ouni; Robyn M Kaake; Lan Huang; Peter Kaiser
Journal:  Mol Cell       Date:  2012-09-20       Impact factor: 17.970

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