Literature DB >> 22743763

SimuCell: a flexible framework for creating synthetic microscopy images.

Satwik Rajaram, Benjamin Pavie, Nicholas E F Hac, Steven J Altschuler, Lani F Wu.   

Abstract

Entities:  

Mesh：

Year:  2012        PMID： 22743763      PMCID： PMC3842427          DOI： 10.1038/nmeth.2096

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


× No keyword cloud information.
  6 in total

1.  Ground-truth data cannot do it alone.

Authors: 
Journal:  Nat Methods       Date:  2011-11       Impact factor: 28.547

2.  Workflow and metrics for image quality control in large-scale high-content screens.

Authors:  Mark-Anthony Bray; Adam N Fraser; Thomas P Hasaka; Anne E Carpenter
Journal:  J Biomol Screen       Date:  2011-09-28

3.  Automated learning of generative models for subcellular location: building blocks for systems biology.

Authors:  Ting Zhao; Robert F Murphy
Journal:  Cytometry A       Date:  2007-12       Impact factor: 4.355

4.  Computational framework for simulating fluorescence microscope images with cell populations.

Authors:  Antti Lehmussola; Pekka Ruusuvuori; Jyrki Selinummi; Heikki Huttunen; Olli Yli-Harja
Journal:  IEEE Trans Med Imaging       Date:  2007-07       Impact factor: 10.048

5.  Generation of digital phantoms of cell nuclei and simulation of image formation in 3D image cytometry.

Authors:  David Svoboda; Michal Kozubek; Stanislav Stejskal
Journal:  Cytometry A       Date:  2009-06       Impact factor: 4.355

6.  Population context determines cell-to-cell variability in endocytosis and virus infection.

Authors:  Berend Snijder; Raphael Sacher; Pauli Rämö; Eva-Maria Damm; Prisca Liberali; Lucas Pelkmans
Journal:  Nature       Date:  2009-08-26       Impact factor: 49.962
  6 in total
  9 in total

1.  Cell Membrane Tracking in Living Brain Tissue Using Differential Interference Contrast Microscopy.

Authors:  John Lee; Ilya Kolb; Craig R Forest; Christopher J Rozell
Journal:  IEEE Trans Image Process       Date:  2018-04       Impact factor: 10.856

Review 2.  Machine learning-enabled multiplexed microfluidic sensors.

Authors:  Sajjad Rahmani Dabbagh; Fazle Rabbi; Zafer Doğan; Ali Kemal Yetisen; Savas Tasoglu
Journal:  Biomicrofluidics       Date:  2020-12-11       Impact factor: 2.800

Review 3.  Visualizing quantitative microscopy data: History and challenges.

Authors:  Heba Z Sailem; Sam Cooper; Chris Bakal
Journal:  Crit Rev Biochem Mol Biol       Date:  2016-02-24       Impact factor: 8.250

4.  Subcellular protein expression models for microsatellite instability in colorectal adenocarcinoma tissue images.

Authors:  Violeta N Kovacheva; Nasir M Rajpoot
Journal:  BMC Bioinformatics       Date:  2016-10-22       Impact factor: 3.169

5.  Using simulated fluorescence cell micrographs for the evaluation of cell image segmentation algorithms.

Authors:  Veit Wiesmann; Matthias Bergler; Ralf Palmisano; Martin Prinzen; Daniela Franz; Thomas Wittenberg
Journal:  BMC Bioinformatics       Date:  2017-03-18       Impact factor: 3.169

6.  Nessys: A new set of tools for the automated detection of nuclei within intact tissues and dense 3D cultures.

Authors:  Guillaume Blin; Daina Sadurska; Rosa Portero Migueles; Naiming Chen; Julia A Watson; Sally Lowell
Journal:  PLoS Biol       Date:  2019-08-09       Impact factor: 8.029

7.  CytoSpectre: a tool for spectral analysis of oriented structures on cellular and subcellular levels.

Authors:  Kimmo Kartasalo; Risto-Pekka Pölönen; Marisa Ojala; Jyrki Rasku; Jukka Lekkala; Katriina Aalto-Setälä; Pasi Kallio
Journal:  BMC Bioinformatics       Date:  2015-10-26       Impact factor: 3.169

8.  A model of the spatial tumour heterogeneity in colorectal adenocarcinoma tissue.

Authors:  Violeta N Kovacheva; David Snead; Nasir M Rajpoot
Journal:  BMC Bioinformatics       Date:  2016-06-24       Impact factor: 3.169

9.  ALICE: a hybrid AI paradigm with enhanced connectivity and cybersecurity for a serendipitous encounter with circulating hybrid cells.

Authors:  Kok Suen Cheng; Rongbin Pan; Huaping Pan; Binglin Li; Stephene Shadrack Meena; Huan Xing; Ying Jing Ng; Kaili Qin; Xuan Liao; Benson Kiprono Kosgei; Zhipeng Wang; Ray P S Han
Journal:  Theranostics       Date:  2020-09-02       Impact factor: 11.556
  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.