Literature DB >> 22735525

Activation thermodynamics of poly(ethylene glycol)-mediated model membrane fusion support mechanistic models of stalk and pore formation.

Hirak Chakraborty1, Pradip K Tarafdar, Michael J Bruno, Tanusree Sengupta, Barry R Lentz.   

Abstract

Membrane fusion, essential to eukaryotic life, is broadly envisioned as a three-step process proceeding from contacting bilayers through two semistable, nonlamellar lipidic intermediate states to a fusion pore. Here, we introduced a new, to our knowledge, experimental approach to gain insight into the nature of the transition states between initial, intermediate, and final states. Recorded time courses of lipid-mixing, content-mixing, and content-leakage associated with fusion of 23 nm vesicles in the presence of poly(ethylene glycol) at multiple temperatures were fitted globally to a three-step sequential model to yield rate constants and thereby activation thermodynamics for each step of the process, as well as probabilities of occurrence of lipid-mixing, content-mixing, or content-leakage in each state. Experiments with membranes containing hexadecane, known to reduce interstice energy in nonlamellar structures, provided additional insight into the nature of fusion intermediates and transition states. The results support a hypothesis for the mechanism of stalk formation (step-1) that involves acyl chain protrusions into the interbilayer contact region, a hypothesis for a step-2 mechanism involving continuous interconversion of semistable nonlamellar intermediates, and a hypothesis for step-3 (pore formation) mechanism involving correlated movement of whole lipid molecules into hydrophobic spaces created by geometry mismatch between intermediate structures.
Copyright © 2012 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22735525      PMCID: PMC3379029          DOI: 10.1016/j.bpj.2012.04.053

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  33 in total

1.  A rhombohedral phase of lipid containing a membrane fusion intermediate structure.

Authors:  Lin Yang; Huey W Huang
Journal:  Biophys J       Date:  2003-03       Impact factor: 4.033

2.  The rate of lipid transfer during fusion depends on the structure of fluorescent lipid probes: a new chain-labeled lipid transfer probe pair.

Authors:  V S Malinin; M E Haque; B R Lentz
Journal:  Biochemistry       Date:  2001-07-27       Impact factor: 3.162

3.  Effects of hemagglutinin fusion peptide on poly(ethylene glycol)-mediated fusion of phosphatidylcholine vesicles.

Authors:  M E Haque; A J McCoy; J Glenn; J Lee; B R Lentz
Journal:  Biochemistry       Date:  2001-11-27       Impact factor: 3.162

4.  VSV transmembrane domain (TMD) peptide promotes PEG-mediated fusion of liposomes in a conformationally sensitive fashion.

Authors:  S Moses Dennison; Norma Greenfield; John Lenard; Barry R Lentz
Journal:  Biochemistry       Date:  2002-12-17       Impact factor: 3.162

5.  Stalk mechanism of vesicle fusion. Intermixing of aqueous contents.

Authors:  M M Kozlov; S L Leikin; L V Chernomordik; V S Markin; Y A Chizmadzhev
Journal:  Eur Biophys J       Date:  1989       Impact factor: 1.733

6.  Capacitance measurements reveal stepwise fusion events in degranulating mast cells.

Authors:  J M Fernandez; E Neher; B D Gomperts
Journal:  Nature       Date:  1984 Nov 29-Dec 5       Impact factor: 49.962

7.  Pyrene cholesterol reports the transient appearance of nonlamellar intermediate structures during fusion of model membranes.

Authors:  Vladimir S Malinin; Barry R Lentz
Journal:  Biochemistry       Date:  2002-05-07       Impact factor: 3.162

8.  Energetics of vesicle fusion intermediates: comparison of calculations with observed effects of osmotic and curvature stresses.

Authors:  Vladimir S Malinin; Barry R Lentz
Journal:  Biophys J       Date:  2004-05       Impact factor: 4.033

9.  Spontaneous fusion of phosphatidylcholine small unilamellar vesicles in the fluid phase.

Authors:  B R Lentz; T J Carpenter; D R Alford
Journal:  Biochemistry       Date:  1987-08-25       Impact factor: 3.162

10.  Membrane curvature, lipid segregation, and structural transitions for phospholipids under dual-solvent stress.

Authors:  R P Rand; N L Fuller; S M Gruner; V A Parsegian
Journal:  Biochemistry       Date:  1990-01-09       Impact factor: 3.162

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  14 in total

1.  The transmembrane domain peptide of vesicular stomatitis virus promotes both intermediate and pore formation during PEG-mediated vesicle fusion.

Authors:  Tanusree Sengupta; Hirak Chakraborty; Barry R Lentz
Journal:  Biophys J       Date:  2014-09-16       Impact factor: 4.033

2.  Wild-type and mutant hemagglutinin fusion peptides alter bilayer structure as well as kinetics and activation thermodynamics of stalk and pore formation differently: mechanistic implications.

Authors:  Hirak Chakraborty; Pradip K Tarafdar; David G Klapper; Barry R Lentz
Journal:  Biophys J       Date:  2013-12-03       Impact factor: 4.033

3.  Exocytotic fusion pores are composed of both lipids and proteins.

Authors:  Huan Bao; Marcel Goldschen-Ohm; Pia Jeggle; Baron Chanda; J Michael Edwardson; Edwin R Chapman
Journal:  Nat Struct Mol Biol       Date:  2015-12-14       Impact factor: 15.369

4.  Calcium-triggered fusion of lipid membranes is enabled by amphiphilic nanoparticles.

Authors:  Mukarram A Tahir; Zekiye P Guven; Laura R Arriaga; Berta Tinao; Yu-Sang Sabrina Yang; Ahmet Bekdemir; Jacob T Martin; Alisha N Bhanji; Darrell Irvine; Francesco Stellacci; Alfredo Alexander-Katz
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-20       Impact factor: 11.205

5.  A novel assay for detecting fusion pore formation: implications for the fusion mechanism.

Authors:  Hirak Chakraborty; Pradip K Tarafdar; Barry R Lentz
Journal:  Biochemistry       Date:  2013-11-11       Impact factor: 3.162

6.  Phosphatidylserine-Dependent Catalysis of Stalk and Pore Formation by Synaptobrevin JMR-TMD Peptide.

Authors:  Pradip K Tarafdar; Hirak Chakraborty; Michael J Bruno; Barry R Lentz
Journal:  Biophys J       Date:  2015-11-03       Impact factor: 4.033

7.  pH Alters PEG-mediated fusion of phosphatidylethanolamine-containing vesicles.

Authors:  Hirak Chakraborty; Tanusree Sengupta; Barry R Lentz
Journal:  Biophys J       Date:  2014-09-16       Impact factor: 4.033

8.  Phosphatidylserine inhibits and calcium promotes model membrane fusion.

Authors:  Pradip K Tarafdar; Hirak Chakraborty; S Moses Dennison; Barry R Lentz
Journal:  Biophys J       Date:  2012-11-07       Impact factor: 4.033

Review 9.  Mechanism of Membrane Fusion: Interplay of Lipid and Peptide.

Authors:  Ankita Joardar; Gourab Prasad Pattnaik; Hirak Chakraborty
Journal:  J Membr Biol       Date:  2022-04-18       Impact factor: 2.426

10.  Coupled diffusion in lipid bilayers upon close approach.

Authors:  Sander Pronk; Erik Lindahl; Peter M Kasson
Journal:  J Am Chem Soc       Date:  2015-01-06       Impact factor: 15.419

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