| Literature DB >> 22732881 |
Wageeh A Yehye1, Noorsaadah Abdul Rahman, Abeer A Alhadi, Hamid Khaledi, Ng Seik Weng, Azhar Ariffin.
Abstract
A computer-aided predictions of antioxidant activities were performed with the Prediction Activity Spectra of Substances (PASS) program. Antioxidant activity of compounds 1, 3, 4 and 5 were studied using 1,1-diphenyl-2-picrylhydrazyl (Entities:
Mesh:
Substances:
Year: 2012 PMID: 22732881 PMCID: PMC6268739 DOI: 10.3390/molecules17077645
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1Chemical structures of compounds BHA, BHT, 1 and 2.
Figure 2Parke-Davis COX-2 inhibitors.
Scheme 1Synthesis of compounds 3–5.
Figure 3Intramolecular hydrogen bonding of thioxo form of 1-acylthiosemicarbazide 3.
Figure 4The molecular structures and labeling schemes of 3 (50% probability ellipsoids).
Selected bond lengths [Å] and bond angles [°] for 3 and 4.
| 3 | 4 | ||
|---|---|---|---|
|
| |||
| S(2)-C(18) | 1.6714(15) | S(2)-C(17) | 1.728(6) |
| O(2)-C(17) | 1.2417(18) | S(2)-C(18) | 1.749(6) |
| N(1)-C(17) | 1.3201(18) | O(1)-C(1) | 1.376(6) |
| N(1)-N(2) | 1.3757(17) | N(1)-C(17) | 1.293(7) |
| N(2)-C(18) | 1.3490(18) | N(1)-N(2) | 1.395(6) |
| N(3)-C(18) | 1.3563(19) | N(2)-C(18) | 1.296(6) |
| N(3)-C(19) | 1.4108(18) | N(3)-C(18) | 1.365(7) |
|
| |||
| C(16)-S(1)-C(15) | 100.77(7) | C(16)-S(1)-C(15) | 100.4(3) |
| C(18)-N(2)-N(1) | 120.45(13) | C(18)-N(3)-C(19) | 130.8(5) |
| N(2)-C(18)-S(2) | 121.18(11) | C(4)-C(15)-S(1) | 113.1(4) |
| N(3)-C(18)-S(2) | 128.05(11) | C(17)-C(16)-S(1) | 112.1(4) |
Hydrogen-bond geometry for 3 and 4.
| D-H···A | H···A [Å] | D···A [Å] | D-H···A [°] |
|---|---|---|---|
| N(3)-H(3N)...O(2) #1 | 2.040 (15) | 2.8570 (16) | 158.1 (17) |
| N(2)-H(2N)...O(2) #1 | 2.019 (16) | 2.7927 (17) | 150.4 (17) |
| N(3)-H(3N)...N(2) #2 | 2.05 (2) | 2.910 (7) | 169 (5) |
Symmetry transformations used to generate equivalent atoms: #1 -x+1,-y+1,-z+1; #2 x+1/2,-y+1/2,-z+1.
Figure 5The molecular structure and labeling scheme of 4 (50% probability ellipsoids).
Crystal data and refinement parameters for 3 and 4.
| 3 | 4 | |
|---|---|---|
| Empirical formula | C24 H32 F N3 O2 S2 | C24 H30 F N3 O S2 |
| Formula weight | 477.65 | 459.63 |
| Crystal system | Triclinic | Monoclinic |
| Space group |
| |
| Unit cell dimensions | ||
| 9.3441 (5) | 28.911 (11) | |
| 11.1548 (6) | 5.731 (2) | |
| 11.7683 (6) | 28.430 (11) | |
| 91.189 (2) | ||
| 93.388 (2) | 99.330 (5) | |
| 93.224 (2) | ||
| Volume [Å3] | 1,222.19 (11) | 4,648 (3) |
| Z | 2 | 8 |
| Independent reflections | 5,587 [ | 4,202 [ |
| Observed reflections [ | 4,988 | 1,848 |
| Final | ||
Part of the predicted biological activity spectra for the compounds 1, 3–5 and BHT.
| Mode of biological activity | 1 | 3 | 4 | 5 | BHT | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| Pa | Pi | Pa | Pi | Pa | Pi | Pa | Pi | pa | Pi | |
| Lipid peroxidase inhibitor | 0.652 | 0.006 | 0.436 | 0.027 | 0.485 | 0.019 | 0.639 | 0.007 | 0.843 | 0.003 |
| Antioxidant | 0.712 | 0.004 | 0.385 | 0.035 | 0.420 | 0.028 | 0.529 | 0.015 | 0.845 | 0.003 |
| Free radical scavenger | 0.807 | 0.004 | 0.585 | 0.025 | 0.554 | 0.031 | 0.506 | 0.042 | 0.797 | 0.004 |
| Antiinflammatory | 0.659 | 0.017 | 0.375 | 0.136 | 0.649 | 0.018 | 0.479 | 0.065 | 0.804 | 0.005 |
Pa—probability “to be active”; Pi—probability “to be inactive”.
Predicted ADMET and Lipinski’s parameters.
| Compound | Violation of Rule of 5 (≤1) | HBA (≤10) | HBD (≤5) | Log
| MW (≤500) | NROTB (≤10) | %ABS | PSA A2 ≤90 |
|---|---|---|---|---|---|---|---|---|
|
| 0 | 4 | 2 | 4.41 | 310.452 | 6 | 88.66 | 58.93 |
|
| 1 | 4 | 4 | 6.43 | 477.658 | 10 | 82.59 | 76.54 |
|
| 1 | 5 | 2 | 6.94 | 459.643 | 8 | 89.63 | 56.14 |
|
| 1 | 4 | 2 | 6.84 | 459.643 | 7 | 92.33 | 48.30 |
|
| 5 | 2 | 6.96 | 459.643 | 7 | 92.21 | 48.68 | |
|
| 0 | 1 | 1 | 4.87 | 220.350 | 2 | 101.81 | 20.81 |
|
| - | - | - | 10.44 | 430.71 | - | 98.73 | 29.74 |
|
| - | - | - | −1.70 | 176.12 | - | 71.23 | 109.49 |
* Vitamin E and C are outside the “rule of 5” [52], BHT—butylated hydroxytoluene, HBA—hydrogen bond acceptor, HBD—hydrogen bond donor, NROTB—number of rotated bonds, PSA—polar surface area.
IC50 value and % inhibition of the DPPH radical scavenging and lipid peroxidation inhibition assays.
| Compounds | IC50 a Values (µM/mL) ± S.E.M b and Max. inhibition % ± S.E.M | |
|---|---|---|
| DPPH Radical Scavenging | Lipid Peroxidation Inhibition | |
| 96.73 ± 1.87 (51.25 ± 0.82) | 38.84 ± 1.54 (73.99 ± 1.30) | |
| 68.03 ± 1.27 (65.21 ± 0.55) | 56.00 ± 5.05 (74.64 ± 1.68) | |
| > 100 c (26.09 ± 0.33) | 33.20 ± 2.91 (84.99 ± 1.37) | |
| 85.30 ± 1.16 (65.26 ± 0.38) | 16.07 ± 3.51 (83.99 ± 1.65) | |
| >100 c (25.23 ± 0.17) | 36.67 ± 1.78 (79.45 ± 1.27) | |
| 67.77 ± 0.17 (71.93 ± 1.61) | - | |
| - | 5.63 ± 1.09 (84.69 ± 1.23) | |
a IC50: 50% effective concentration; b S.E.M: standard error of the mean; c did not reach 50% inhibition.
Figure 6Phenylthiourea system.
Scheme 2Thione I and thiol II tautomers of 5.