Literature DB >> 22728014

Does DNA repair occur during somatic hypermutation?

Huseyin Saribasak1, Patricia J Gearhart.   

Abstract

Activation-induced deaminase (AID) initiates a flood of DNA damage in the immunoglobulin loci, leading to abasic sites, single-strand breaks and mismatches. It is compelling that some proteins in the canonical base excision and mismatch repair pathways have been hijacked to increase mutagenesis during somatic hypermutation. Thus, the AID-induced mutagenic pathways involve a mix of DNA repair proteins and low fidelity DNA polymerases to create antibody diversity. In this review, we analyze the roles of base excision repair, mismatch repair, and mutagenesis during somatic hypermutation of rearranged variable genes. The emerging view is that faithful base excision repair occurs simultaneously with mutagenesis, whereas faithful mismatch repair is mostly absent. Published by Elsevier Ltd.

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Year:  2012        PMID: 22728014      PMCID: PMC3422422          DOI: 10.1016/j.smim.2012.05.002

Source DB:  PubMed          Journal:  Semin Immunol        ISSN: 1044-5323            Impact factor:   11.130


  99 in total

1.  Local sequence targeting in the AID/APOBEC family differentially impacts retroviral restriction and antibody diversification.

Authors:  Rahul M Kohli; Robert W Maul; Amy F Guminski; Rhonda L McClure; Kiran S Gajula; Huseyin Saribasak; Moira A McMahon; Robert F Siliciano; Patricia J Gearhart; James T Stivers
Journal:  J Biol Chem       Date:  2010-10-06       Impact factor: 5.157

2.  Somatic hypermutation: processivity of the cytosine deaminase AID and error-free repair of the resulting uracils.

Authors:  Ursula Storb; Hong Ming Shen; Dan Nicolae
Journal:  Cell Cycle       Date:  2009-10-29       Impact factor: 4.534

3.  Determinants of sequence-specificity within human AID and APOBEC3G.

Authors:  Michael A Carpenter; Erandi Rajagurubandara; Priyanga Wijesinghe; Ashok S Bhagwat
Journal:  DNA Repair (Amst)       Date:  2010-03-24

4.  Activation-induced cytidine deaminase targets DNA at sites of RNA polymerase II stalling by interaction with Spt5.

Authors:  Rushad Pavri; Anna Gazumyan; Mila Jankovic; Michela Di Virgilio; Isaac Klein; Camilo Ansarah-Sobrinho; Wolfgang Resch; Arito Yamane; Bernardo Reina San-Martin; Vasco Barreto; Thomas J Nieland; David E Root; Rafael Casellas; Michel C Nussenzweig
Journal:  Cell       Date:  2010-10-01       Impact factor: 41.582

5.  Uracil residues dependent on the deaminase AID in immunoglobulin gene variable and switch regions.

Authors:  Robert W Maul; Huseyin Saribasak; Stella A Martomo; Rhonda L McClure; William Yang; Alexandra Vaisman; Hillary S Gramlich; David G Schatz; Roger Woodgate; David M Wilson; Patricia J Gearhart
Journal:  Nat Immunol       Date:  2010-12-12       Impact factor: 25.606

Review 6.  AID and somatic hypermutation.

Authors:  Robert W Maul; Patricia J Gearhart
Journal:  Adv Immunol       Date:  2010       Impact factor: 3.543

7.  MSH2/MSH6 complex promotes error-free repair of AID-induced dU:G mispairs as well as error-prone hypermutation of A:T sites.

Authors:  Sergio Roa; Ziqiang Li; Jonathan U Peled; Chunfang Zhao; Winfried Edelmann; Matthew D Scharff
Journal:  PLoS One       Date:  2010-06-17       Impact factor: 3.240

Review 8.  A coming-of-age story: activation-induced cytidine deaminase turns 10.

Authors:  Rebecca K Delker; Sebastian D Fugmann; F Nina Papavasiliou
Journal:  Nat Immunol       Date:  2009-10-20       Impact factor: 25.606

9.  Dependence of nucleotide substitutions on Ung2, Msh2, and PCNA-Ub during somatic hypermutation.

Authors:  Peter H L Krijger; Petra Langerak; Paul C M van den Berk; Heinz Jacobs
Journal:  J Exp Med       Date:  2009-11-09       Impact factor: 14.307

10.  Altering the spectrum of immunoglobulin V gene somatic hypermutation by modifying the active site of AID.

Authors:  Meng Wang; Cristina Rada; Michael S Neuberger
Journal:  J Exp Med       Date:  2010-01-04       Impact factor: 14.307

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  17 in total

Review 1.  Non-canonical actions of mismatch repair.

Authors:  Gray F Crouse
Journal:  DNA Repair (Amst)       Date:  2015-12-02

2.  JH6 downstream intronic sequence is dispensable for RNA polymerase II accumulation and somatic hypermutation of the variable gene in Ramos cells.

Authors:  Diana P Castiblanco; Darrell D Norton; Robert W Maul; Patricia J Gearhart
Journal:  Mol Immunol       Date:  2018-04-04       Impact factor: 4.407

Review 3.  Regulation of immunoglobulin class-switch recombination: choreography of noncoding transcription, targeted DNA deamination, and long-range DNA repair.

Authors:  Allysia J Matthews; Simin Zheng; Lauren J DiMenna; Jayanta Chaudhuri
Journal:  Adv Immunol       Date:  2014       Impact factor: 3.543

Review 4.  Base excision repair: a critical player in many games.

Authors:  Susan S Wallace
Journal:  DNA Repair (Amst)       Date:  2014-04-26

5.  B cells from young and old mice switch isotypes with equal frequencies after ex vivo stimulation.

Authors:  Lisa M Russell Knode; Han-Sol Park; Robert W Maul; Patricia J Gearhart
Journal:  Cell Immunol       Date:  2019-08-19       Impact factor: 4.868

Review 6.  DNA repair and systemic lupus erythematosus.

Authors:  Rithy Meas; Matthew J Burak; Joann B Sweasy
Journal:  DNA Repair (Amst)       Date:  2017-06-09

Review 7.  Related Mechanisms of Antibody Somatic Hypermutation and Class Switch Recombination.

Authors:  Joyce K Hwang; Frederick W Alt; Leng-Siew Yeap
Journal:  Microbiol Spectr       Date:  2015-02

Review 8.  Antibody diversification caused by disrupted mismatch repair and promiscuous DNA polymerases.

Authors:  Kimberly J Zanotti; Patricia J Gearhart
Journal:  DNA Repair (Amst)       Date:  2015-12-02

9.  Refining the Neuberger model: Uracil processing by activated B cells.

Authors:  Robert W Maul; Patricia J Gearhart
Journal:  Eur J Immunol       Date:  2014-06-30       Impact factor: 5.532

Review 10.  Structural, molecular and cellular functions of MSH2 and MSH6 during DNA mismatch repair, damage signaling and other noncanonical activities.

Authors:  Michael A Edelbrock; Saravanan Kaliyaperumal; Kandace J Williams
Journal:  Mutat Res       Date:  2013-02-04       Impact factor: 2.433

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