Literature DB >> 22726432

A movie of RNA polymerase II transcription.

Alan C M Cheung1, Patrick Cramer.   

Abstract

We provide here a molecular movie that captures key aspects of RNA polymerase II initiation and elongation. To create the movie, we combined structural snapshots of the initiation-elongation transition and of elongation, including nucleotide addition, translocation, pausing, proofreading, backtracking, arrest, reactivation, and inhibition. The movie reveals open questions about the mechanism of transcription and provides a useful teaching tool.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22726432     DOI: 10.1016/j.cell.2012.06.006

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  47 in total

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Journal:  Microbiol Mol Biol Rev       Date:  2016-01-13       Impact factor: 11.056

Review 2.  RNA polymerase II transcription elongation control.

Authors:  Jiannan Guo; David H Price
Journal:  Chem Rev       Date:  2013-08-06       Impact factor: 60.622

3.  RNA Polymerase II Regulates Topoisomerase 1 Activity to Favor Efficient Transcription.

Authors:  Laura Baranello; Damian Wojtowicz; Kairong Cui; Ballachanda N Devaiah; Hye-Jung Chung; Ka Yim Chan-Salis; Rajarshi Guha; Kelli Wilson; Xiaohu Zhang; Hongliang Zhang; Jason Piotrowski; Craig J Thomas; Dinah S Singer; B Franklin Pugh; Yves Pommier; Teresa M Przytycka; Fedor Kouzine; Brian A Lewis; Keji Zhao; David Levens
Journal:  Cell       Date:  2016-04-07       Impact factor: 41.582

Review 4.  Structural insights into transcription initiation by RNA polymerase II.

Authors:  Sebastian Grünberg; Steven Hahn
Journal:  Trends Biochem Sci       Date:  2013-10-11       Impact factor: 13.807

5.  Millisecond dynamics of RNA polymerase II translocation at atomic resolution.

Authors:  Daniel-Adriano Silva; Dahlia R Weiss; Fátima Pardo Avila; Lin-Tai Da; Michael Levitt; Dong Wang; Xuhui Huang
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-21       Impact factor: 11.205

6.  PICking apart Pol II initiation.

Authors:  Michael Carey
Journal:  Nat Struct Mol Biol       Date:  2012-08       Impact factor: 15.369

Review 7.  Connecting the dots of RNA-directed DNA methylation in Arabidopsis thaliana.

Authors:  Pedro Costa-Nunes; Alexa Vitins; Olga Pontes
Journal:  Chromosome Res       Date:  2014-06       Impact factor: 5.239

8.  Conserved DNA sequence features underlie pervasive RNA polymerase pausing.

Authors:  Martyna Gajos; Olga Jasnovidova; Alena van Bömmel; Susanne Freier; Martin Vingron; Andreas Mayer
Journal:  Nucleic Acids Res       Date:  2021-05-07       Impact factor: 16.971

9.  RNA polymerase structure, function, regulation, dynamics, fidelity, and roles in gene expression.

Authors:  Maria L Kireeva; Mikhail Kashlev; Zachary F Burton
Journal:  Chem Rev       Date:  2013-11-13       Impact factor: 60.622

10.  The TAF9 C-terminal conserved region domain is required for SAGA and TFIID promoter occupancy to promote transcriptional activation.

Authors:  Malika Saint; Sonal Sawhney; Ishani Sinha; Rana Pratap Singh; Rashmi Dahiya; Anushikha Thakur; Rahul Siddharthan; Krishnamurthy Natarajan
Journal:  Mol Cell Biol       Date:  2014-02-18       Impact factor: 4.272

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