Literature DB >> 22721555

Dissociation of the K-Ras4B/PDEδ complex upon contact with lipid membranes: membrane delivery instead of extraction.

Katrin Weise1, Shobhna Kapoor, Alexander Werkmüller, Simone Möbitz, Gunther Zimmermann, Gemma Triola, Herbert Waldmann, Roland Winter.   

Abstract

K-Ras4B is a small GTPase whose selective membrane localization and clustering into microdomains are mediated by its polybasic farnesylated C-terminus. The importance of the subcellular distribution for the signaling activity of K-Ras4B became apparent from recent in vivo studies, showing that the delta subunit of cGMP phosphodiesterase (PDEδ), which possesses a hydrophobic prenyl-binding pocket, is able to function as a potential binding partner for farnesylated proteins, thereby leading to a modulation of the spatiotemporal organization of K-Ras. Even though PDEδ has been suggested to serve as a cytosolic carrier for Ras, the functional transport mechanism still remains largely elusive. In this study, the effect of PDEδ on the interaction of GDP- and GTP-loaded K-Ras4B with neutral and anionic model biomembranes has been investigated by a combination of different spectroscopic and imaging techniques. The results show that PDEδ is not able to extract K-Ras4B from membranes. Rather, the K-Ras4B/PDEδ complex formed in bulk solution turned out to be unstable in the presence of heterogeneous membranes, resulting in a release of farnesylated K-Ras4B upon membrane contact. With the additional observation of enhanced membrane affinity for the K-Ras4B/PDEδ complex, a molecular mechanism for the PDEδ-K-Ras4B-membrane interaction could be proposed. This includes an effective delivery of PDEδ-solubilized K-Ras4B to the plasma membrane, probably through cytoplasmic diffusion, the dissociation of the K-Ras4B/PDEδ complex upon plasma membrane contact, and finally the membrane binding of released farnesylated K-Ras4B that leads to K-Ras4B-enriched microdomain formation.

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Year:  2012        PMID: 22721555     DOI: 10.1021/ja305518h

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  20 in total

1.  Effect of the N-Terminal Helix and Nucleotide Loading on the Membrane and Effector Binding of Arl2/3.

Authors:  Shobhna Kapoor; Eyad K Fansa; Simone Möbitz; Shehab A Ismail; Roland Winter; Alfred Wittinghofer; Katrin Weise
Journal:  Biophys J       Date:  2015-10-20       Impact factor: 4.033

2.  Regulation of K-Ras4B Membrane Binding by Calmodulin.

Authors:  Benjamin Sperlich; Shobhna Kapoor; Herbert Waldmann; Roland Winter; Katrin Weise
Journal:  Biophys J       Date:  2016-07-12       Impact factor: 4.033

Review 3.  Oncogenic Ras Isoforms Signaling Specificity at the Membrane.

Authors:  Ruth Nussinov; Chung-Jung Tsai; Hyunbum Jang
Journal:  Cancer Res       Date:  2017-12-22       Impact factor: 12.701

4.  Flexible-body motions of calmodulin and the farnesylated hypervariable region yield a high-affinity interaction enabling K-Ras4B membrane extraction.

Authors:  Hyunbum Jang; Avik Banerjee; Tanmay Chavan; Vadim Gaponenko; Ruth Nussinov
Journal:  J Biol Chem       Date:  2017-06-16       Impact factor: 5.157

5.  Protein Lipidation: Occurrence, Mechanisms, Biological Functions, and Enabling Technologies.

Authors:  Hong Jiang; Xiaoyu Zhang; Xiao Chen; Pornpun Aramsangtienchai; Zhen Tong; Hening Lin
Journal:  Chem Rev       Date:  2018-01-02       Impact factor: 60.622

6.  Structural basis of recognition of farnesylated and methylated KRAS4b by PDEδ.

Authors:  Srisathiyanarayanan Dharmaiah; Lakshman Bindu; Timothy H Tran; William K Gillette; Peter H Frank; Rodolfo Ghirlando; Dwight V Nissley; Dominic Esposito; Frank McCormick; Andrew G Stephen; Dhirendra K Simanshu
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-17       Impact factor: 11.205

7.  Quantitative biophysical analysis defines key components modulating recruitment of the GTPase KRAS to the plasma membrane.

Authors:  Bindu Lakshman; Simon Messing; Eva M Schmid; Jeffrey D Clogston; William K Gillette; Dominic Esposito; Bailey Kessing; Daniel A Fletcher; Dwight V Nissley; Frank McCormick; Andrew G Stephen; Frantz L Jean-Francois
Journal:  J Biol Chem       Date:  2018-12-17       Impact factor: 5.157

8.  PDEδ Binding to Ras Isoforms Provides a Route to Proper Membrane Localization.

Authors:  Serena Muratcioglu; Hyunbum Jang; Attila Gursoy; Ozlem Keskin; Ruth Nussinov
Journal:  J Phys Chem B       Date:  2017-06-07       Impact factor: 2.991

9.  The Structural Basis of the Farnesylated and Methylated KRas4B Interaction with Calmodulin.

Authors:  Hyunbum Jang; Avik Banerjee; Kendra Marcus; Lee Makowski; Carla Mattos; Vadim Gaponenko; Ruth Nussinov
Journal:  Structure       Date:  2019-09-05       Impact factor: 5.006

Review 10.  Oligomerization and nanocluster organization render specificity.

Authors:  Ruth Nussinov; Hyunbum Jang; Chung-Jung Tsai
Journal:  Biol Rev Camb Philos Soc       Date:  2014-06-11
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