Literature DB >> 22719681

Bis(benzyl-aminium) 4,5-dichloro-benzene-1,2-dicarboxyl-ate monohydrate.

Graham Smith1, Urs D Wermuth.   

Abstract

In the structure of the title salt, 2C(7)H(10)N(+)·C(8)H(2)Cl(2)O(4) (2-)·H(2)O, the two benzyl-aminium anions have different conformations, one being essentially planar and the other having the side chain rotated out of the benzene plane [minimum ring to side-chain C-C-C-N torsion angles = -3.6 (6) and 50.1 (5)°, respectively]. In the 4,5-dichloro-phthalate dianion, the carboxyl-ate groups make dihedral angles of 23.0 (2) and 76.5 (2)° with the benzene ring. In the crystal, aminium N-H⋯O and water O-H⋯O hydrogen-bonding associations with carboxyl-ate O-atom acceptors give a two-dimensional duplex sheet structure which extends along the (011) plane. Weak π-π inter-actions are also present between the benzene ring of the dianion and one of the cation rings [minimum ring centroid separation = 2.749 (3) Å].

Entities:  

Year:  2012        PMID: 22719681      PMCID: PMC3379483          DOI: 10.1107/S1600536812023458

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of some 1:1 Lewis base salts of 4,5-dichloro­phthalic acid, see: Mattes & Dorau (1986 ▶); Smith et al. (2008 ▶). For crystal structures having dianionic 4,5-dichloro­phthalate species, see: Büyükgüngör & Odabaşoğlu (2007 ▶); Smith & Wermuth (2010 ▶, 2011 ▶).

Experimental

Crystal data

2C7H10N+·C8H2Cl2O4 2−·H2O M = 467.33 Monoclinic, a = 17.3005 (16) Å b = 10.0084 (7) Å c = 13.6990 (12) Å β = 112.641 (11)° V = 2189.2 (4) Å3 Z = 4 Mo Kα radiation μ = 0.33 mm−1 T = 200 K 0.33 × 0.22 × 0.12 mm

Data collection

Oxford Diffraction Gemini-S CCD-detector diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010 ▶) T min = 0.86, T max = 0.98 12311 measured reflections 3842 independent reflections 3019 reflections with I > 2σ(I) R int = 0.045

Refinement

R[F 2 > 2σ(F 2)] = 0.068 wR(F 2) = 0.189 S = 1.19 3842 reflections 312 parameters H-atom parameters constrained Δρmax = 0.79 e Å−3 Δρmin = −0.37 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2010 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶) within WinGX (Farrugia, 1999 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812023458/wn2476sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812023458/wn2476Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812023458/wn2476Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
2C7H10N+·C8H2Cl2O42·H2OF(000) = 976
Mr = 467.33Dx = 1.418 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 6279 reflections
a = 17.3005 (16) Åθ = 3.2–28.7°
b = 10.0084 (7) ŵ = 0.33 mm1
c = 13.6990 (12) ÅT = 200 K
β = 112.641 (11)°Plate, colourless
V = 2189.2 (4) Å30.33 × 0.22 × 0.12 mm
Z = 4
Oxford Diffraction Gemini-S CCD-detector diffractometer3842 independent reflections
Radiation source: Enhance (Mo) X-ray source3019 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.045
Detector resolution: 16.077 pixels mm-1θmax = 25.0°, θmin = 3.2°
ω scansh = −20→20
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010)k = −11→11
Tmin = 0.86, Tmax = 0.98l = −16→16
12311 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.068Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.189H-atom parameters constrained
S = 1.19w = 1/[σ2(Fo2) + (0.0794P)2 + 3.4869P] where P = (Fo2 + 2Fc2)/3
3842 reflections(Δ/σ)max = 0.001
312 parametersΔρmax = 0.79 e Å3
0 restraintsΔρmin = −0.37 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N11A0.4026 (2)0.4021 (3)0.0987 (2)0.0293 (11)
C1A0.2474 (3)0.4407 (4)0.0233 (3)0.0307 (11)
C2A0.1790 (3)0.5252 (5)−0.0185 (4)0.0460 (17)
C3A0.0984 (3)0.4801 (6)−0.0447 (4)0.0571 (19)
C4A0.0838 (3)0.3462 (6)−0.0318 (4)0.0515 (19)
C5A0.1508 (3)0.2619 (5)0.0077 (4)0.0443 (16)
C6A0.2319 (3)0.3065 (4)0.0357 (3)0.0353 (14)
C11A0.3333 (3)0.4980 (4)0.0506 (3)0.0322 (12)
N11B0.5631 (2)0.4462 (3)0.4310 (2)0.0270 (10)
C1B0.6924 (3)0.3655 (4)0.5777 (3)0.0295 (11)
C2B0.7238 (3)0.3664 (4)0.6877 (3)0.0378 (14)
C3B0.8081 (3)0.3812 (5)0.7454 (4)0.0446 (16)
C4B0.8630 (3)0.3963 (4)0.6953 (4)0.0431 (16)
C5B0.8322 (3)0.3971 (5)0.5861 (4)0.0443 (17)
C6B0.7479 (3)0.3822 (5)0.5275 (4)0.0392 (16)
C11B0.6004 (3)0.3454 (4)0.5161 (3)0.0329 (12)
Cl40.05397 (7)0.26123 (11)0.21573 (9)0.0404 (4)
Cl50.06311 (7)−0.04167 (12)0.15221 (10)0.0496 (4)
O110.38460 (19)−0.0979 (3)0.2378 (2)0.0332 (9)
O120.45046 (18)0.0453 (3)0.3688 (2)0.0394 (10)
O210.40882 (18)0.3398 (3)0.3058 (2)0.0353 (9)
O220.39728 (17)0.3096 (3)0.4609 (2)0.0285 (8)
C10.3039 (2)0.0669 (4)0.2786 (3)0.0243 (11)
C20.2997 (2)0.1997 (4)0.3108 (3)0.0232 (11)
C30.2221 (2)0.2560 (4)0.2924 (3)0.0259 (11)
C40.1492 (2)0.1842 (4)0.2424 (3)0.0283 (12)
C50.1534 (3)0.0524 (4)0.2126 (3)0.0302 (12)
C60.2302 (3)−0.0051 (4)0.2304 (3)0.0293 (12)
C110.3866 (3)0.0005 (4)0.2974 (3)0.0278 (12)
C210.3755 (2)0.2872 (4)0.3636 (3)0.0240 (11)
O1W0.5248 (2)0.1641 (3)0.2253 (2)0.0437 (11)
H2A0.187800.61480−0.029100.0550*
H3A0.053600.53930−0.071000.0690*
H4A0.029500.31450−0.049700.0620*
H5A0.141500.171800.015900.0530*
H6A0.276300.246800.062900.0420*
H11A0.402800.371700.158000.0350*
H12A0.449800.447700.109000.0350*
H13A0.400800.339700.053000.0350*
H14A0.337000.53380−0.013300.0390*
H15A0.340700.571800.099300.0390*
H2B0.687300.356900.722400.0450*
H3B0.828300.380900.818900.0540*
H4B0.920100.405900.734500.0520*
H5B0.868900.407800.551800.0530*
H6B0.727900.383400.454000.0470*
H11B0.583000.445100.381100.0320*
H12B0.505000.428100.391100.0320*
H13B0.570000.520100.459100.0320*
H14B0.591600.257000.484700.0390*
H15B0.571600.349300.564300.0390*
H30.219000.343300.313900.0310*
H60.23260−0.093000.209900.0350*
H11W0.552100.236600.236700.0650*
H12W0.505100.158600.265700.0650*
U11U22U33U12U13U23
N11A0.037 (2)0.0257 (18)0.0298 (17)−0.0037 (15)0.0179 (15)−0.0026 (14)
C1A0.040 (2)0.030 (2)0.0254 (19)0.0025 (19)0.0164 (18)−0.0033 (16)
C2A0.048 (3)0.036 (3)0.052 (3)0.008 (2)0.017 (2)0.002 (2)
C3A0.040 (3)0.069 (4)0.058 (3)0.018 (3)0.014 (2)−0.002 (3)
C4A0.039 (3)0.079 (4)0.040 (3)−0.008 (3)0.019 (2)−0.004 (3)
C5A0.045 (3)0.050 (3)0.041 (2)−0.009 (2)0.020 (2)0.003 (2)
C6A0.043 (3)0.036 (2)0.031 (2)0.002 (2)0.0188 (19)0.0054 (18)
C11A0.041 (2)0.023 (2)0.033 (2)0.0014 (18)0.0148 (18)−0.0012 (17)
N11B0.0371 (19)0.0191 (16)0.0293 (16)−0.0034 (14)0.0179 (15)−0.0041 (13)
C1B0.038 (2)0.0147 (18)0.041 (2)0.0021 (17)0.0210 (19)0.0040 (16)
C2B0.045 (3)0.031 (2)0.042 (2)0.002 (2)0.022 (2)0.0070 (19)
C3B0.049 (3)0.040 (3)0.041 (2)0.002 (2)0.013 (2)0.004 (2)
C4B0.034 (3)0.027 (2)0.064 (3)0.0046 (19)0.014 (2)−0.001 (2)
C5B0.041 (3)0.039 (3)0.062 (3)0.004 (2)0.030 (2)0.003 (2)
C6B0.042 (3)0.040 (3)0.041 (2)0.004 (2)0.022 (2)0.005 (2)
C11B0.041 (2)0.021 (2)0.043 (2)0.0023 (18)0.023 (2)0.0063 (17)
Cl40.0307 (6)0.0397 (6)0.0530 (7)0.0075 (5)0.0185 (5)0.0053 (5)
Cl50.0350 (6)0.0422 (7)0.0676 (8)−0.0120 (5)0.0155 (6)−0.0114 (6)
O110.0445 (18)0.0204 (14)0.0431 (16)0.0051 (13)0.0262 (14)−0.0038 (12)
O120.0333 (17)0.0378 (17)0.0430 (17)0.0084 (14)0.0103 (14)−0.0079 (14)
O210.0378 (17)0.0388 (17)0.0327 (15)−0.0107 (14)0.0173 (13)0.0040 (13)
O220.0405 (16)0.0210 (14)0.0276 (14)−0.0035 (12)0.0171 (12)−0.0039 (11)
C10.035 (2)0.0204 (19)0.0226 (18)−0.0011 (16)0.0169 (16)0.0002 (15)
C20.031 (2)0.0222 (19)0.0221 (17)0.0015 (16)0.0164 (16)0.0029 (15)
C30.036 (2)0.0210 (19)0.0255 (19)0.0025 (17)0.0173 (17)−0.0015 (15)
C40.030 (2)0.032 (2)0.029 (2)0.0059 (18)0.0180 (17)0.0040 (17)
C50.035 (2)0.025 (2)0.032 (2)−0.0073 (18)0.0146 (18)−0.0015 (16)
C60.038 (2)0.024 (2)0.031 (2)−0.0005 (18)0.0189 (18)−0.0018 (16)
C110.034 (2)0.023 (2)0.032 (2)0.0036 (17)0.0188 (18)0.0075 (17)
C210.029 (2)0.0151 (18)0.031 (2)0.0028 (15)0.0150 (17)0.0032 (15)
O1W0.059 (2)0.0254 (16)0.0577 (19)−0.0065 (15)0.0345 (17)−0.0072 (14)
Cl4—C41.726 (4)C6A—H6A0.9300
Cl5—C51.737 (5)C11A—H15A0.9700
O11—C111.271 (5)C11A—H14A0.9700
O12—C111.244 (5)C1B—C2B1.391 (5)
O21—C211.260 (5)C1B—C11B1.501 (7)
O22—C211.258 (5)C1B—C6B1.390 (7)
O1W—H11W0.8500C2B—C3B1.373 (7)
O1W—H12W0.7600C3B—C4B1.378 (8)
N11A—C11A1.478 (6)C4B—C5B1.381 (7)
N11A—H13A0.8800C5B—C6B1.376 (8)
N11A—H11A0.8700C2B—H2B0.9300
N11A—H12A0.9000C3B—H3B0.9300
N11B—C11B1.488 (5)C4B—H4B0.9300
N11B—H12B0.9600C5B—H5B0.9300
N11B—H13B0.8200C6B—H6B0.9300
N11B—H11B0.8800C11B—H15B0.9700
C1A—C6A1.393 (6)C11B—H14B0.9700
C1A—C2A1.386 (7)C1—C111.507 (6)
C1A—C11A1.500 (7)C1—C21.411 (6)
C2A—C3A1.375 (8)C1—C61.390 (6)
C3A—C4A1.388 (8)C2—C211.510 (5)
C4A—C5A1.366 (8)C2—C31.387 (5)
C5A—C6A1.379 (8)C3—C41.382 (5)
C2A—H2A0.9300C4—C51.391 (6)
C3A—H3A0.9300C5—C61.381 (7)
C4A—H4A0.9300C3—H30.9300
C5A—H5A0.9300C6—H60.9300
H11W—O1W—H12W108.00C4B—C5B—C6B120.8 (5)
C11A—N11A—H13A110.00C1B—C6B—C5B120.2 (5)
C11A—N11A—H11A111.00N11B—C11B—C1B113.3 (4)
H12A—N11A—H13A105.00C1B—C2B—H2B120.00
H11A—N11A—H13A114.00C3B—C2B—H2B120.00
H11A—N11A—H12A111.00C4B—C3B—H3B120.00
C11A—N11A—H12A106.00C2B—C3B—H3B120.00
C11B—N11B—H11B115.00C3B—C4B—H4B120.00
H12B—N11B—H13B112.00C5B—C4B—H4B120.00
C11B—N11B—H13B108.00C4B—C5B—H5B120.00
H11B—N11B—H13B110.00C6B—C5B—H5B120.00
C11B—N11B—H12B111.00C5B—C6B—H6B120.00
H11B—N11B—H12B101.00C1B—C6B—H6B120.00
C6A—C1A—C11A123.9 (4)N11B—C11B—H15B109.00
C2A—C1A—C11A118.4 (4)C1B—C11B—H14B109.00
C2A—C1A—C6A117.7 (5)C1B—C11B—H15B109.00
C1A—C2A—C3A121.7 (5)H14B—C11B—H15B108.00
C2A—C3A—C4A120.0 (5)N11B—C11B—H14B109.00
C3A—C4A—C5A118.6 (5)C2—C1—C6119.2 (4)
C4A—C5A—C6A121.9 (5)C2—C1—C11121.4 (3)
C1A—C6A—C5A120.1 (4)C6—C1—C11119.3 (4)
N11A—C11A—C1A114.8 (3)C1—C2—C21123.8 (3)
C3A—C2A—H2A119.00C3—C2—C21116.9 (3)
C1A—C2A—H2A119.00C1—C2—C3119.3 (4)
C2A—C3A—H3A120.00C2—C3—C4120.9 (4)
C4A—C3A—H3A120.00Cl4—C4—C3119.2 (3)
C3A—C4A—H4A121.00Cl4—C4—C5121.0 (3)
C5A—C4A—H4A121.00C3—C4—C5119.8 (4)
C4A—C5A—H5A119.00Cl5—C5—C6119.1 (3)
C6A—C5A—H5A119.00C4—C5—C6119.9 (4)
C1A—C6A—H6A120.00Cl5—C5—C4121.0 (4)
C5A—C6A—H6A120.00C1—C6—C5120.8 (4)
H14A—C11A—H15A108.00O11—C11—C1116.3 (4)
N11A—C11A—H14A109.00O12—C11—C1118.2 (4)
N11A—C11A—H15A109.00O11—C11—O12125.5 (5)
C1A—C11A—H14A109.00O21—C21—C2117.7 (3)
C1A—C11A—H15A109.00O22—C21—C2117.5 (3)
C2B—C1B—C6B118.6 (5)O21—C21—O22124.7 (4)
C2B—C1B—C11B119.8 (4)C2—C3—H3120.00
C6B—C1B—C11B121.6 (4)C4—C3—H3119.00
C1B—C2B—C3B120.6 (5)C1—C6—H6120.00
C2B—C3B—C4B120.5 (5)C5—C6—H6120.00
C3B—C4B—C5B119.2 (5)
C6A—C1A—C2A—C3A1.6 (7)C11—C1—C2—C3−179.5 (4)
C11A—C1A—C2A—C3A−179.5 (4)C11—C1—C2—C211.4 (6)
C2A—C1A—C6A—C5A−0.6 (6)C2—C1—C6—C50.9 (6)
C11A—C1A—C6A—C5A−179.4 (4)C11—C1—C6—C5179.6 (4)
C2A—C1A—C11A—N11A177.6 (4)C2—C1—C11—O11−157.7 (4)
C6A—C1A—C11A—N11A−3.6 (6)C2—C1—C11—O1222.4 (6)
C1A—C2A—C3A—C4A−1.5 (8)C6—C1—C11—O1123.6 (6)
C2A—C3A—C4A—C5A0.4 (8)C6—C1—C11—O12−156.3 (4)
C3A—C4A—C5A—C6A0.6 (8)C1—C2—C3—C4−0.5 (6)
C4A—C5A—C6A—C1A−0.5 (7)C21—C2—C3—C4178.6 (3)
C6B—C1B—C2B—C3B−1.1 (6)C1—C2—C21—O2178.1 (5)
C11B—C1B—C2B—C3B178.3 (4)C1—C2—C21—O22−106.7 (5)
C2B—C1B—C6B—C5B1.0 (7)C3—C2—C21—O21−101.0 (4)
C11B—C1B—C6B—C5B−178.4 (4)C3—C2—C21—O2274.2 (5)
C2B—C1B—C11B—N11B130.6 (4)C2—C3—C4—Cl4−177.0 (3)
C6B—C1B—C11B—N11B−50.1 (5)C2—C3—C4—C51.8 (6)
C1B—C2B—C3B—C4B0.4 (7)Cl4—C4—C5—Cl5−2.6 (5)
C2B—C3B—C4B—C5B0.3 (7)Cl4—C4—C5—C6177.0 (3)
C3B—C4B—C5B—C6B−0.4 (7)C3—C4—C5—Cl5178.6 (3)
C4B—C5B—C6B—C1B−0.3 (7)C3—C4—C5—C6−1.8 (6)
C6—C1—C2—C3−0.8 (6)Cl5—C5—C6—C1−180.0 (3)
C6—C1—C2—C21−179.9 (4)C4—C5—C6—C10.4 (6)
D—H···AD—HH···AD···AD—H···A
N11A—H11A···O210.872.012.866 (4)168
N11A—H12A···O12i0.901.902.801 (5)180
N11A—H13A···O22ii0.881.942.816 (4)175
N11B—H11B···O11i0.881.962.823 (4)167
N11B—H12B···O210.961.852.770 (4)160
N11B—H13B···O22iii0.821.992.803 (4)172
O1W—H11W···O11i0.851.942.789 (4)179
O1W—H12W···O120.762.282.980 (4)154
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N11A—H11A⋯O210.872.012.866 (4)168
N11A—H12A⋯O12i0.901.902.801 (5)180
N11A—H13A⋯O22ii0.881.942.816 (4)175
N11B—H11B⋯O11i0.881.962.823 (4)167
N11B—H12B⋯O210.961.852.770 (4)160
N11B—H13B⋯O22iii0.821.992.803 (4)172
O1W—H11W⋯O11i0.851.942.789 (4)179
O1W—H12W⋯O120.762.282.980 (4)154

Symmetry codes: (i) ; (ii) ; (iii) .

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  5 in total
  1 in total

1.  4-Meth-oxy-anilinium 2-carb-oxy-4,5-di-chloro-benzoate.

Authors:  Graham Smith; Urs D Wermuth
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-09-18
  1 in total

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