Literature DB >> 22719599

2-Methyl-2-(3-nitro-phen-yl)-1,3-dithiane.

Pavla Mirošová, Marek Nečas, Robert Vícha.   

Abstract

The title compound, C(11)H(13)NO(2)S(2), contains a 1,3-dithiane ring in an almost ideal chair conformation with the following puckering parameters: Q = 0.7252 (15) Å, θ = 6.71 (13) and ϕ = 50.4 (11)°. The benzene ring occupies an axial position at the dithiane ring. The nitro group is almost coplanar with the benzene ring [O-N-C-C = -3.2 (2)°]. The mol-ecule has an L-shape with a C-C-C-C torsion angle of -74.15 (17)° for the atoms of the methyl group and the dithiane-benzene linkage. The crystal packing is stabilized only via weak non-specific van der Waals inter-actions.

Entities:  

Year:  2012        PMID: 22719599      PMCID: PMC3379401          DOI: 10.1107/S1600536812022283

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the preparation of the title compound, see Vícha et al. (2011 ▶). For crystallographic data for similar aryl-substituted 1,3-dithia­nes, see: Fun et al. (2009a ▶,b ▶); Samas et al. (2010 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C11H13NO2S2 M = 255.36 Orthorhombic, a = 13.5388 (3) Å b = 7.2660 (1) Å c = 24.1083 (4) Å V = 2371.60 (7) Å3 Z = 8 Mo Kα radiation μ = 0.43 mm−1 T = 120 K 0.40 × 0.40 × 0.30 mm

Data collection

Oxford Diffraction Xcalibur Sapphire2 diffractometer Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009 ▶) T min = 0.899, T max = 1.000 25370 measured reflections 2086 independent reflections 1871 reflections with I > 2σ(I) R int = 0.016

Refinement

R[F 2 > 2σ(F 2)] = 0.027 wR(F 2) = 0.074 S = 1.08 2086 reflections 145 parameters H-atom parameters constrained Δρmax = 0.38 e Å−3 Δρmin = −0.19 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2009 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SIR92 (Altomare et al., 1993 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812022283/nk2160sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812022283/nk2160Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812022283/nk2160Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H13NO2S2Dx = 1.430 Mg m3
Mr = 255.36Melting point: 350 K
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 29781 reflections
a = 13.5388 (3) Åθ = 2.9–27.1°
b = 7.2660 (1) ŵ = 0.43 mm1
c = 24.1083 (4) ÅT = 120 K
V = 2371.60 (7) Å3Block, yellow
Z = 80.40 × 0.40 × 0.30 mm
F(000) = 1072
Oxford Diffraction Xcalibur Sapphire2 diffractometer2086 independent reflections
Radiation source: Enhance (Mo) X-ray Source1871 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.016
Detector resolution: 8.4353 pixels mm-1θmax = 25.0°, θmin = 3.3°
ω scanh = −16→10
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009)k = −8→8
Tmin = 0.899, Tmax = 1.000l = −28→28
25370 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.027Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.074H-atom parameters constrained
S = 1.08w = 1/[σ2(Fo2) + (0.0353P)2 + 1.7194P] where P = (Fo2 + 2Fc2)/3
2086 reflections(Δ/σ)max = 0.001
145 parametersΔρmax = 0.38 e Å3
0 restraintsΔρmin = −0.19 e Å3
Experimental. Spectral properties of title compound: IR (KBr disc): 3075 (w), 2964 (w), 2937 (w), 2897 (w), 2856 (w), 2825 (w),1574 (w), 1524 (s), 1468 (w), 1422 (m), 1346 (s), 1305 (w), 1283 (w), 1274 (w), 1252 (w), 1193 (w), 1166 (w), 1095 (m), 1065 (w), 1048 (w), 997 (w), 929 (w), 903 (m), 895 (m), 870 (w), 805 (s), 761 (w), 738 (s), 688 (s), 626 (s), 564 (w), 540 (w), 486 (w) cm-1. 1H NMR (300 MHz; CDCl3): δ 2.75 (s, 3H); 1.94–2.62 (m, 2H); 2.63–2.82 (m, 4H); 7.57 (t, 1H); 8.13–8.16 (m, 1H); 8.31–8.35 (m, 1H); 8.84–8.85 (m, 1H) ppm. 13C NMR (75.5 MHz; CDCl3): δ 24.5 (CH2); 28.3 (CH2); 33.0 (CH3); 53.3 (C); 122.5 (CH); 123.4 (CH); 129.8 (CH); 134.4 (CH); 147.0 (C);149.0 (C) ppm. MS (EI, 70 eV): 41 (13); 45 (13); 46 (21); 51 (9); 59 (32); 73 (15); 74 (100); 75 (10); 76 (10); 77 (14); 91 (15); 102 (14); 103 (6); 105 (9); 120 (16); 133 (5); 134 (14); 135 (5); 148 (13); 166 (36); 181 (39); 182 (6); 240 (7); 255 (47); 256 (7) m/z (%).
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.42653 (3)0.06433 (6)0.318872 (16)0.02260 (13)
S20.34860 (3)0.31750 (6)0.406194 (17)0.02437 (13)
O10.78844 (9)0.06238 (18)0.31090 (5)0.0316 (3)
O20.88864 (8)0.19994 (18)0.36717 (6)0.0351 (3)
N10.80521 (10)0.15222 (19)0.35301 (6)0.0237 (3)
C10.72158 (11)0.2054 (2)0.38863 (6)0.0193 (3)
C20.62711 (12)0.1592 (2)0.37124 (6)0.0178 (3)
H2A0.61740.09530.33730.021*
C30.54695 (11)0.2075 (2)0.40399 (6)0.0169 (3)
C40.56495 (12)0.3022 (2)0.45353 (7)0.0211 (3)
H4A0.51080.33810.47610.025*
C50.66055 (13)0.3445 (2)0.47029 (7)0.0241 (4)
H5A0.67100.40720.50440.029*
C60.74045 (12)0.2961 (2)0.43775 (6)0.0222 (4)
H6A0.80610.32440.44880.027*
C70.44172 (11)0.1432 (2)0.39012 (6)0.0186 (3)
C80.44276 (12)0.2773 (3)0.28100 (7)0.0277 (4)
H8A0.50940.32670.28900.033*
H8B0.43940.25070.24080.033*
C90.36643 (13)0.4236 (3)0.29500 (8)0.0315 (4)
H9A0.37460.52900.26940.038*
H9B0.29950.37220.28920.038*
C100.37475 (13)0.4923 (2)0.35432 (8)0.0299 (4)
H10A0.32830.59610.35950.036*
H10B0.44240.53970.36040.036*
C110.41696 (13)−0.0232 (2)0.42694 (7)0.0265 (4)
H11A0.4648−0.12180.42010.040*
H11B0.3503−0.06720.41820.040*
H11C0.41990.01340.46600.040*
U11U22U33U12U13U23
S10.0192 (2)0.0278 (2)0.0209 (2)−0.00284 (16)−0.00093 (15)−0.00663 (16)
S20.0173 (2)0.0303 (2)0.0255 (2)0.00491 (17)0.00228 (16)−0.00487 (17)
O10.0243 (7)0.0412 (7)0.0293 (6)−0.0001 (6)0.0060 (5)−0.0056 (6)
O20.0139 (6)0.0411 (8)0.0503 (8)−0.0024 (5)−0.0002 (6)0.0003 (6)
N10.0170 (7)0.0241 (7)0.0299 (8)0.0003 (6)0.0011 (6)0.0070 (6)
C10.0177 (8)0.0162 (7)0.0239 (8)0.0014 (6)0.0012 (6)0.0044 (6)
C20.0191 (8)0.0168 (7)0.0176 (7)0.0003 (6)−0.0018 (6)0.0009 (6)
C30.0180 (8)0.0159 (7)0.0169 (7)0.0003 (6)−0.0009 (6)0.0028 (6)
C40.0233 (8)0.0196 (8)0.0204 (8)0.0002 (7)0.0016 (6)0.0004 (6)
C50.0300 (9)0.0212 (8)0.0210 (8)−0.0035 (7)−0.0061 (7)−0.0007 (6)
C60.0200 (8)0.0192 (8)0.0275 (8)−0.0044 (7)−0.0070 (7)0.0056 (6)
C70.0161 (8)0.0220 (8)0.0177 (7)0.0005 (6)0.0012 (6)−0.0018 (6)
C80.0229 (9)0.0414 (10)0.0189 (8)−0.0022 (8)−0.0021 (7)0.0043 (7)
C90.0233 (9)0.0390 (10)0.0323 (9)0.0005 (8)−0.0048 (8)0.0118 (8)
C100.0227 (9)0.0245 (9)0.0426 (10)0.0038 (7)−0.0017 (8)0.0016 (8)
C110.0205 (8)0.0296 (9)0.0294 (9)−0.0057 (7)0.0004 (7)0.0044 (7)
S1—C81.8098 (18)C5—C61.382 (2)
S1—C71.8224 (15)C5—H5A0.9500
S2—C101.8171 (19)C6—H6A0.9500
S2—C71.8285 (16)C7—C111.537 (2)
O1—N11.2282 (18)C8—C91.521 (3)
O2—N11.2298 (18)C8—H8A0.9900
N1—C11.473 (2)C8—H8B0.9900
C1—C61.379 (2)C9—C101.519 (3)
C1—C21.387 (2)C9—H9A0.9900
C2—C31.387 (2)C9—H9B0.9900
C2—H2A0.9500C10—H10A0.9900
C3—C41.399 (2)C10—H10B0.9900
C3—C71.536 (2)C11—H11A0.9800
C4—C51.390 (2)C11—H11B0.9800
C4—H4A0.9500C11—H11C0.9800
C8—S1—C7101.13 (8)C11—C7—S2105.78 (11)
C10—S2—C7101.75 (8)S1—C7—S2109.86 (8)
O1—N1—O2123.30 (14)C9—C8—S1113.79 (12)
O1—N1—C1118.64 (13)C9—C8—H8A108.8
O2—N1—C1118.06 (14)S1—C8—H8A108.8
C6—C1—C2123.08 (15)C9—C8—H8B108.8
C6—C1—N1118.92 (14)S1—C8—H8B108.8
C2—C1—N1117.99 (14)H8A—C8—H8B107.7
C1—C2—C3119.22 (14)C10—C9—C8112.84 (14)
C1—C2—H2A120.4C10—C9—H9A109.0
C3—C2—H2A120.4C8—C9—H9A109.0
C2—C3—C4118.28 (14)C10—C9—H9B109.0
C2—C3—C7121.65 (13)C8—C9—H9B109.0
C4—C3—C7119.78 (14)H9A—C9—H9B107.8
C5—C4—C3121.25 (15)C9—C10—S2113.85 (13)
C5—C4—H4A119.4C9—C10—H10A108.8
C3—C4—H4A119.4S2—C10—H10A108.8
C6—C5—C4120.50 (15)C9—C10—H10B108.8
C6—C5—H5A119.8S2—C10—H10B108.8
C4—C5—H5A119.8H10A—C10—H10B107.7
C1—C6—C5117.65 (15)C7—C11—H11A109.5
C1—C6—H6A121.2C7—C11—H11B109.5
C5—C6—H6A121.2H11A—C11—H11B109.5
C3—C7—C11108.41 (13)C7—C11—H11C109.5
C3—C7—S1113.92 (10)H11A—C11—H11C109.5
C11—C7—S1105.81 (11)H11B—C11—H11C109.5
C3—C7—S2112.50 (11)
  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2-(4-Nitro-phen-yl)-1,3-dithiane.

Authors:  Hoong-Kun Fun; Reza Kia; Annada C Maity; Shyamaprosad Goswami
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-17

3.  2-[4-Chloro-3-(4-ethoxy-benz-yl)phen-yl]-1,3-dithiane.

Authors:  Brian Samas; Cathy Préville; Benjamin A Thuma; Vincent Mascitti
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-05-19

4.  7-Nitro-1,2,3,4-tetra-hydro-naphthalene-1-spiro-2'-(1,3-dithiane).

Authors:  Hoong-Kun Fun; Reza Kia; Annada C Maity; Shyamaprosad Goswami
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-17
  4 in total

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