| Literature DB >> 21581948 |
Hoong-Kun Fun, Reza Kia, Annada C Maity, Shyamaprosad Goswami.
Abstract
In the title compound, C(13)H(15)NO(2)S(2), the nitro group is coplanar with the benzene ring to which it is attached, forming a dihedral angle of 1.07 (14)°. The dithiane ring adopts a chair conformation. In the crystal structure, mol-ecules are linked through C-H⋯O and C-H⋯π [C⋯Cg = 3.7164 (15) Å] inter-actions. The crystal studied was an inversion twin with an 0.134 (5):0.866 (5) domain ratio.Entities:
Year: 2009 PMID: 21581948 PMCID: PMC2968322 DOI: 10.1107/S1600536809001536
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H15NO2S2 | |
| Orthorhombic, | Mo |
| Hall symbol: F 2 -2d | Cell parameters from 9946 reflections |
| θ = 2.8–35.0° | |
| µ = 0.42 mm−1 | |
| Plate, colourless | |
| 0.41 × 0.30 × 0.06 mm |
| Bruker SMART APEXII CCD area-detector diffractometer | 6726 independent reflections |
| Radiation source: fine-focus sealed tube | 5979 reflections with |
| graphite | |
| φ and ω scans | θmax = 37.9°, θmin = 1.9° |
| Absorption correction: multi-scan ( | |
| 54206 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 6726 reflections | Δρmax = 0.42 e Å−3 |
| 164 parameters | Δρmin = −0.23 e Å−3 |
| 1 restraint | Absolute structure: Flack (1983), 3202 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.13 (5) |
| Experimental. The low-temperature data was collected with the Oxford Cyrosystem Cobra low-temperature attachment. |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| S1 | 0.10407 (2) | 0.241432 (7) | 0.34587 (3) | 0.01374 (6) | |
| S2 | −0.04426 (2) | 0.186537 (7) | 0.31249 (4) | 0.01436 (6) | |
| O1 | 0.08674 (9) | 0.16135 (3) | 0.79752 (12) | 0.0220 (2) | |
| O2 | 0.22833 (9) | 0.13439 (3) | 0.82907 (13) | 0.0258 (2) | |
| N1 | 0.16994 (9) | 0.15045 (3) | 0.75344 (12) | 0.0163 (2) | |
| C1 | 0.08854 (9) | 0.20066 (3) | 0.27797 (13) | 0.01231 (19) | |
| C2 | 0.11450 (10) | 0.19792 (3) | 0.11508 (14) | 0.0159 (2) | |
| H2A | 0.0911 | 0.1775 | 0.0791 | 0.019* | |
| H2B | 0.0776 | 0.2143 | 0.0618 | 0.019* | |
| C3 | 0.23059 (10) | 0.20125 (3) | 0.08744 (15) | 0.0167 (2) | |
| H3A | 0.2552 | 0.2212 | 0.1269 | 0.020* | |
| H3B | 0.2440 | 0.2011 | −0.0165 | 0.020* | |
| C4 | 0.28806 (11) | 0.17388 (3) | 0.15959 (15) | 0.0167 (2) | |
| H4A | 0.2745 | 0.1546 | 0.1055 | 0.020* | |
| H4B | 0.3622 | 0.1779 | 0.1556 | 0.020* | |
| C5 | 0.25624 (9) | 0.16909 (3) | 0.31606 (15) | 0.0139 (2) | |
| C6 | 0.32137 (11) | 0.15154 (3) | 0.40812 (16) | 0.0173 (2) | |
| H6A | 0.3840 | 0.1439 | 0.3719 | 0.021* | |
| C7 | 0.29507 (11) | 0.14526 (3) | 0.55123 (16) | 0.0169 (2) | |
| H7A | 0.3388 | 0.1335 | 0.6112 | 0.020* | |
| C8 | 0.20103 (10) | 0.15708 (3) | 0.60257 (14) | 0.0140 (2) | |
| C9 | 0.13528 (10) | 0.17506 (3) | 0.51660 (14) | 0.0132 (2) | |
| H9A | 0.0739 | 0.1831 | 0.5550 | 0.016* | |
| C10 | 0.16192 (10) | 0.18097 (3) | 0.37155 (13) | 0.0127 (2) | |
| C11 | −0.11830 (10) | 0.21555 (3) | 0.20993 (15) | 0.0160 (2) | |
| H11A | −0.0973 | 0.2145 | 0.1086 | 0.019* | |
| H11B | −0.1913 | 0.2100 | 0.2147 | 0.019* | |
| C12 | −0.10538 (11) | 0.24943 (3) | 0.26325 (16) | 0.0176 (2) | |
| H12A | −0.1238 | 0.2503 | 0.3656 | 0.021* | |
| H12B | −0.1535 | 0.2629 | 0.2107 | 0.021* | |
| C13 | 0.00429 (10) | 0.26252 (3) | 0.24439 (15) | 0.0164 (2) | |
| H13A | 0.0046 | 0.2845 | 0.2747 | 0.020* | |
| H13B | 0.0220 | 0.2619 | 0.1418 | 0.020* |
| S1 | 0.01297 (12) | 0.01371 (11) | 0.01454 (13) | 0.00002 (10) | −0.00051 (10) | −0.00104 (10) |
| S2 | 0.01150 (11) | 0.01563 (11) | 0.01593 (13) | −0.00058 (10) | −0.00027 (10) | 0.00191 (10) |
| O1 | 0.0251 (5) | 0.0258 (5) | 0.0152 (4) | 0.0057 (4) | 0.0027 (4) | −0.0002 (4) |
| O2 | 0.0277 (5) | 0.0308 (5) | 0.0188 (5) | 0.0073 (4) | −0.0041 (4) | 0.0086 (4) |
| N1 | 0.0198 (5) | 0.0157 (4) | 0.0135 (5) | 0.0000 (4) | −0.0024 (4) | 0.0006 (4) |
| C1 | 0.0110 (5) | 0.0143 (4) | 0.0117 (5) | −0.0003 (4) | 0.0009 (4) | −0.0003 (4) |
| C2 | 0.0159 (5) | 0.0197 (5) | 0.0121 (5) | 0.0014 (4) | 0.0012 (4) | −0.0010 (4) |
| C3 | 0.0171 (5) | 0.0185 (5) | 0.0146 (5) | 0.0009 (4) | 0.0045 (4) | 0.0010 (4) |
| C4 | 0.0154 (5) | 0.0187 (5) | 0.0159 (5) | 0.0023 (4) | 0.0047 (4) | 0.0002 (4) |
| C5 | 0.0123 (5) | 0.0135 (4) | 0.0158 (5) | −0.0003 (4) | 0.0018 (4) | −0.0002 (4) |
| C6 | 0.0141 (5) | 0.0172 (5) | 0.0205 (6) | 0.0031 (4) | 0.0015 (5) | 0.0006 (5) |
| C7 | 0.0153 (5) | 0.0156 (5) | 0.0197 (6) | 0.0020 (4) | −0.0024 (4) | 0.0013 (4) |
| C8 | 0.0158 (5) | 0.0137 (4) | 0.0124 (5) | −0.0012 (4) | −0.0010 (4) | 0.0003 (4) |
| C9 | 0.0123 (5) | 0.0146 (5) | 0.0128 (5) | −0.0001 (4) | −0.0003 (4) | −0.0006 (4) |
| C10 | 0.0116 (5) | 0.0135 (4) | 0.0129 (5) | −0.0009 (4) | −0.0002 (4) | −0.0002 (4) |
| C11 | 0.0129 (5) | 0.0179 (5) | 0.0173 (6) | 0.0011 (4) | −0.0022 (4) | 0.0010 (4) |
| C12 | 0.0158 (6) | 0.0164 (5) | 0.0207 (6) | 0.0033 (4) | −0.0006 (5) | −0.0002 (4) |
| C13 | 0.0152 (5) | 0.0152 (5) | 0.0187 (6) | 0.0019 (4) | −0.0006 (4) | 0.0013 (4) |
| S1—C13 | 1.8192 (13) | C5—C6 | 1.4022 (18) |
| S1—C1 | 1.8421 (12) | C5—C10 | 1.4086 (17) |
| S2—C11 | 1.8153 (13) | C6—C7 | 1.383 (2) |
| S2—C1 | 1.8375 (12) | C6—H6A | 0.9300 |
| O1—N1 | 1.2337 (16) | C7—C8 | 1.3915 (18) |
| O2—N1 | 1.2276 (15) | C7—H7A | 0.9300 |
| N1—C8 | 1.4688 (17) | C8—C9 | 1.3840 (17) |
| C1—C10 | 1.5236 (17) | C9—C10 | 1.3977 (17) |
| C1—C2 | 1.5369 (17) | C9—H9A | 0.9300 |
| C2—C3 | 1.5217 (18) | C11—C12 | 1.5216 (19) |
| C2—H2A | 0.9700 | C11—H11A | 0.9700 |
| C2—H2B | 0.9700 | C11—H11B | 0.9700 |
| C3—C4 | 1.5237 (18) | C12—C13 | 1.5254 (19) |
| C3—H3A | 0.9700 | C12—H12A | 0.9700 |
| C3—H3B | 0.9700 | C12—H12B | 0.9700 |
| C4—C5 | 1.5075 (19) | C13—H13A | 0.9700 |
| C4—H4A | 0.9700 | C13—H13B | 0.9700 |
| C4—H4B | 0.9700 | ||
| C13—S1—C1 | 101.98 (6) | C7—C6—H6A | 119.1 |
| C11—S2—C1 | 100.34 (6) | C5—C6—H6A | 119.1 |
| O2—N1—O1 | 123.49 (12) | C6—C7—C8 | 117.77 (12) |
| O2—N1—C8 | 118.18 (11) | C6—C7—H7A | 121.1 |
| O1—N1—C8 | 118.33 (11) | C8—C7—H7A | 121.1 |
| C10—C1—C2 | 111.90 (10) | C9—C8—C7 | 122.36 (12) |
| C10—C1—S2 | 107.56 (8) | C9—C8—N1 | 118.43 (11) |
| C2—C1—S2 | 110.21 (9) | C7—C8—N1 | 119.20 (11) |
| C10—C1—S1 | 104.60 (8) | C8—C9—C10 | 119.44 (11) |
| C2—C1—S1 | 112.11 (8) | C8—C9—H9A | 120.3 |
| S2—C1—S1 | 110.24 (6) | C10—C9—H9A | 120.3 |
| C3—C2—C1 | 111.63 (11) | C9—C10—C5 | 119.50 (11) |
| C3—C2—H2A | 109.3 | C9—C10—C1 | 118.87 (11) |
| C1—C2—H2A | 109.3 | C5—C10—C1 | 121.62 (11) |
| C3—C2—H2B | 109.3 | C12—C11—S2 | 114.24 (9) |
| C1—C2—H2B | 109.3 | C12—C11—H11A | 108.7 |
| H2A—C2—H2B | 108.0 | S2—C11—H11A | 108.7 |
| C2—C3—C4 | 109.49 (11) | C12—C11—H11B | 108.7 |
| C2—C3—H3A | 109.8 | S2—C11—H11B | 108.7 |
| C4—C3—H3A | 109.8 | H11A—C11—H11B | 107.6 |
| C2—C3—H3B | 109.8 | C11—C12—C13 | 113.91 (11) |
| C4—C3—H3B | 109.8 | C11—C12—H12A | 108.8 |
| H3A—C3—H3B | 108.2 | C13—C12—H12A | 108.8 |
| C5—C4—C3 | 112.60 (11) | C11—C12—H12B | 108.8 |
| C5—C4—H4A | 109.1 | C13—C12—H12B | 108.8 |
| C3—C4—H4A | 109.1 | H12A—C12—H12B | 107.7 |
| C5—C4—H4B | 109.1 | C12—C13—S1 | 114.67 (9) |
| C3—C4—H4B | 109.1 | C12—C13—H13A | 108.6 |
| H4A—C4—H4B | 107.8 | S1—C13—H13A | 108.6 |
| C6—C5—C10 | 119.02 (12) | C12—C13—H13B | 108.6 |
| C6—C5—C4 | 118.89 (11) | S1—C13—H13B | 108.6 |
| C10—C5—C4 | 122.07 (11) | H13A—C13—H13B | 107.6 |
| C7—C6—C5 | 121.88 (12) | ||
| C11—S2—C1—C10 | 173.57 (8) | O2—N1—C8—C7 | −0.47 (18) |
| C11—S2—C1—C2 | −64.20 (9) | O1—N1—C8—C7 | 179.39 (12) |
| C11—S2—C1—S1 | 60.08 (7) | C7—C8—C9—C10 | 1.89 (18) |
| C13—S1—C1—C10 | −173.77 (8) | N1—C8—C9—C10 | −178.31 (11) |
| C13—S1—C1—C2 | 64.78 (10) | C8—C9—C10—C5 | −1.31 (17) |
| C13—S1—C1—S2 | −58.40 (8) | C8—C9—C10—C1 | 179.70 (11) |
| C10—C1—C2—C3 | −45.80 (14) | C6—C5—C10—C9 | 0.02 (17) |
| S2—C1—C2—C3 | −165.44 (8) | C4—C5—C10—C9 | 178.31 (11) |
| S1—C1—C2—C3 | 71.36 (12) | C6—C5—C10—C1 | 178.98 (11) |
| C1—C2—C3—C4 | 64.05 (14) | C4—C5—C10—C1 | −2.73 (18) |
| C2—C3—C4—C5 | −49.41 (15) | C2—C1—C10—C9 | −165.62 (11) |
| C3—C4—C5—C6 | −161.70 (12) | S2—C1—C10—C9 | −44.44 (13) |
| C3—C4—C5—C10 | 20.01 (17) | S1—C1—C10—C9 | 72.78 (12) |
| C10—C5—C6—C7 | 0.79 (19) | C2—C1—C10—C5 | 15.41 (16) |
| C4—C5—C6—C7 | −177.56 (12) | S2—C1—C10—C5 | 136.59 (10) |
| C5—C6—C7—C8 | −0.27 (19) | S1—C1—C10—C5 | −106.18 (11) |
| C6—C7—C8—C9 | −1.09 (19) | C1—S2—C11—C12 | −61.71 (11) |
| C6—C7—C8—N1 | 179.11 (11) | S2—C11—C12—C13 | 65.29 (14) |
| O2—N1—C8—C9 | 179.72 (12) | C11—C12—C13—S1 | −62.18 (14) |
| O1—N1—C8—C9 | −0.42 (17) | C1—S1—C13—C12 | 56.76 (11) |
| H··· | ||||
| C13—H13A···O1i | 0.97 | 2.58 | 3.4565 (18) | 151 |
| C7—H7A···Cg1ii | 0.93 | 2.82 | 3.7164 (15) | 162 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C13—H13 | 0.97 | 2.58 | 3.4565 (18) | 151 |
| C7—H7 | 0.93 | 2.82 | 3.7164 (15) | 162 |
Symmetry codes: (i) ; (ii) . Cg1 is the centroid of the C5–C10 benzene ring.