Literature DB >> 21581948

7-Nitro-1,2,3,4-tetra-hydro-naphthalene-1-spiro-2'-(1,3-dithiane).

Hoong-Kun Fun, Reza Kia, Annada C Maity, Shyamaprosad Goswami.   

Abstract

In the title compound, C(13)H(15)NO(2)S(2), the nitro group is coplanar with the benzene ring to which it is attached, forming a dihedral angle of 1.07 (14)°. The dithiane ring adopts a chair conformation. In the crystal structure, mol-ecules are linked through C-H⋯O and C-H⋯π [C⋯Cg = 3.7164 (15) Å] inter-actions. The crystal studied was an inversion twin with an 0.134 (5):0.866 (5) domain ratio.

Entities:  

Year:  2009        PMID: 21581948      PMCID: PMC2968322          DOI: 10.1107/S1600536809001536

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the calculation of ring puckering parameters, see: Cremer & Pople (1975 ▶). For related literature including applications, see: Goswami & Maity (2008 ▶); Fun et al. (2009 ▶).

Experimental

Crystal data

C13H15NO2S2 M = 281.38 Orthorhombic, a = 12.8673 (1) Å b = 42.2330 (6) Å c = 9.1819 (1) Å V = 4989.67 (10) Å3 Z = 16 Mo Kα radiation μ = 0.42 mm−1 T = 100.0 (1) K 0.41 × 0.30 × 0.06 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (; Bruker, 2005 ▶) T min = 0.849, T max = 0.977 54206 measured reflections 6726 independent reflections 5979 reflections with I > 2σ(I) R int = 0.067

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.077 S = 1.06 6726 reflections 164 parameters 1 restraint H-atom parameters constrained Δρmax = 0.42 e Å−3 Δρmin = −0.23 e Å−3 Absolute structure: Flack (1983 ▶), 3202 Friedel pairs Flack parameter: 0.13 (5) Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809001536/tk2351sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809001536/tk2351Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H15NO2S2F(000) = 2368
Mr = 281.38Dx = 1.498 Mg m3
Orthorhombic, Fdd2Mo Kα radiation, λ = 0.71073 Å
Hall symbol: F 2 -2dCell parameters from 9946 reflections
a = 12.8673 (1) Åθ = 2.8–35.0°
b = 42.2330 (6) ŵ = 0.42 mm1
c = 9.1819 (1) ÅT = 100 K
V = 4989.67 (10) Å3Plate, colourless
Z = 160.41 × 0.30 × 0.06 mm
Bruker SMART APEXII CCD area-detector diffractometer6726 independent reflections
Radiation source: fine-focus sealed tube5979 reflections with I > 2σ(I)
graphiteRint = 0.067
φ and ω scansθmax = 37.9°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −22→22
Tmin = 0.849, Tmax = 0.977k = −72→72
54206 measured reflectionsl = −15→15
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.042H-atom parameters constrained
wR(F2) = 0.077w = 1/[σ2(Fo2) + (0.0258P)2 + 6.6616P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max = 0.001
6726 reflectionsΔρmax = 0.42 e Å3
164 parametersΔρmin = −0.23 e Å3
1 restraintAbsolute structure: Flack (1983), 3202 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.13 (5)
Experimental. The low-temperature data was collected with the Oxford Cyrosystem Cobra low-temperature attachment.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.10407 (2)0.241432 (7)0.34587 (3)0.01374 (6)
S2−0.04426 (2)0.186537 (7)0.31249 (4)0.01436 (6)
O10.08674 (9)0.16135 (3)0.79752 (12)0.0220 (2)
O20.22833 (9)0.13439 (3)0.82907 (13)0.0258 (2)
N10.16994 (9)0.15045 (3)0.75344 (12)0.0163 (2)
C10.08854 (9)0.20066 (3)0.27797 (13)0.01231 (19)
C20.11450 (10)0.19792 (3)0.11508 (14)0.0159 (2)
H2A0.09110.17750.07910.019*
H2B0.07760.21430.06180.019*
C30.23059 (10)0.20125 (3)0.08744 (15)0.0167 (2)
H3A0.25520.22120.12690.020*
H3B0.24400.2011−0.01650.020*
C40.28806 (11)0.17388 (3)0.15959 (15)0.0167 (2)
H4A0.27450.15460.10550.020*
H4B0.36220.17790.15560.020*
C50.25624 (9)0.16909 (3)0.31606 (15)0.0139 (2)
C60.32137 (11)0.15154 (3)0.40812 (16)0.0173 (2)
H6A0.38400.14390.37190.021*
C70.29507 (11)0.14526 (3)0.55123 (16)0.0169 (2)
H7A0.33880.13350.61120.020*
C80.20103 (10)0.15708 (3)0.60257 (14)0.0140 (2)
C90.13528 (10)0.17506 (3)0.51660 (14)0.0132 (2)
H9A0.07390.18310.55500.016*
C100.16192 (10)0.18097 (3)0.37155 (13)0.0127 (2)
C11−0.11830 (10)0.21555 (3)0.20993 (15)0.0160 (2)
H11A−0.09730.21450.10860.019*
H11B−0.19130.21000.21470.019*
C12−0.10538 (11)0.24943 (3)0.26325 (16)0.0176 (2)
H12A−0.12380.25030.36560.021*
H12B−0.15350.26290.21070.021*
C130.00429 (10)0.26252 (3)0.24439 (15)0.0164 (2)
H13A0.00460.28450.27470.020*
H13B0.02200.26190.14180.020*
U11U22U33U12U13U23
S10.01297 (12)0.01371 (11)0.01454 (13)0.00002 (10)−0.00051 (10)−0.00104 (10)
S20.01150 (11)0.01563 (11)0.01593 (13)−0.00058 (10)−0.00027 (10)0.00191 (10)
O10.0251 (5)0.0258 (5)0.0152 (4)0.0057 (4)0.0027 (4)−0.0002 (4)
O20.0277 (5)0.0308 (5)0.0188 (5)0.0073 (4)−0.0041 (4)0.0086 (4)
N10.0198 (5)0.0157 (4)0.0135 (5)0.0000 (4)−0.0024 (4)0.0006 (4)
C10.0110 (5)0.0143 (4)0.0117 (5)−0.0003 (4)0.0009 (4)−0.0003 (4)
C20.0159 (5)0.0197 (5)0.0121 (5)0.0014 (4)0.0012 (4)−0.0010 (4)
C30.0171 (5)0.0185 (5)0.0146 (5)0.0009 (4)0.0045 (4)0.0010 (4)
C40.0154 (5)0.0187 (5)0.0159 (5)0.0023 (4)0.0047 (4)0.0002 (4)
C50.0123 (5)0.0135 (4)0.0158 (5)−0.0003 (4)0.0018 (4)−0.0002 (4)
C60.0141 (5)0.0172 (5)0.0205 (6)0.0031 (4)0.0015 (5)0.0006 (5)
C70.0153 (5)0.0156 (5)0.0197 (6)0.0020 (4)−0.0024 (4)0.0013 (4)
C80.0158 (5)0.0137 (4)0.0124 (5)−0.0012 (4)−0.0010 (4)0.0003 (4)
C90.0123 (5)0.0146 (5)0.0128 (5)−0.0001 (4)−0.0003 (4)−0.0006 (4)
C100.0116 (5)0.0135 (4)0.0129 (5)−0.0009 (4)−0.0002 (4)−0.0002 (4)
C110.0129 (5)0.0179 (5)0.0173 (6)0.0011 (4)−0.0022 (4)0.0010 (4)
C120.0158 (6)0.0164 (5)0.0207 (6)0.0033 (4)−0.0006 (5)−0.0002 (4)
C130.0152 (5)0.0152 (5)0.0187 (6)0.0019 (4)−0.0006 (4)0.0013 (4)
S1—C131.8192 (13)C5—C61.4022 (18)
S1—C11.8421 (12)C5—C101.4086 (17)
S2—C111.8153 (13)C6—C71.383 (2)
S2—C11.8375 (12)C6—H6A0.9300
O1—N11.2337 (16)C7—C81.3915 (18)
O2—N11.2276 (15)C7—H7A0.9300
N1—C81.4688 (17)C8—C91.3840 (17)
C1—C101.5236 (17)C9—C101.3977 (17)
C1—C21.5369 (17)C9—H9A0.9300
C2—C31.5217 (18)C11—C121.5216 (19)
C2—H2A0.9700C11—H11A0.9700
C2—H2B0.9700C11—H11B0.9700
C3—C41.5237 (18)C12—C131.5254 (19)
C3—H3A0.9700C12—H12A0.9700
C3—H3B0.9700C12—H12B0.9700
C4—C51.5075 (19)C13—H13A0.9700
C4—H4A0.9700C13—H13B0.9700
C4—H4B0.9700
C13—S1—C1101.98 (6)C7—C6—H6A119.1
C11—S2—C1100.34 (6)C5—C6—H6A119.1
O2—N1—O1123.49 (12)C6—C7—C8117.77 (12)
O2—N1—C8118.18 (11)C6—C7—H7A121.1
O1—N1—C8118.33 (11)C8—C7—H7A121.1
C10—C1—C2111.90 (10)C9—C8—C7122.36 (12)
C10—C1—S2107.56 (8)C9—C8—N1118.43 (11)
C2—C1—S2110.21 (9)C7—C8—N1119.20 (11)
C10—C1—S1104.60 (8)C8—C9—C10119.44 (11)
C2—C1—S1112.11 (8)C8—C9—H9A120.3
S2—C1—S1110.24 (6)C10—C9—H9A120.3
C3—C2—C1111.63 (11)C9—C10—C5119.50 (11)
C3—C2—H2A109.3C9—C10—C1118.87 (11)
C1—C2—H2A109.3C5—C10—C1121.62 (11)
C3—C2—H2B109.3C12—C11—S2114.24 (9)
C1—C2—H2B109.3C12—C11—H11A108.7
H2A—C2—H2B108.0S2—C11—H11A108.7
C2—C3—C4109.49 (11)C12—C11—H11B108.7
C2—C3—H3A109.8S2—C11—H11B108.7
C4—C3—H3A109.8H11A—C11—H11B107.6
C2—C3—H3B109.8C11—C12—C13113.91 (11)
C4—C3—H3B109.8C11—C12—H12A108.8
H3A—C3—H3B108.2C13—C12—H12A108.8
C5—C4—C3112.60 (11)C11—C12—H12B108.8
C5—C4—H4A109.1C13—C12—H12B108.8
C3—C4—H4A109.1H12A—C12—H12B107.7
C5—C4—H4B109.1C12—C13—S1114.67 (9)
C3—C4—H4B109.1C12—C13—H13A108.6
H4A—C4—H4B107.8S1—C13—H13A108.6
C6—C5—C10119.02 (12)C12—C13—H13B108.6
C6—C5—C4118.89 (11)S1—C13—H13B108.6
C10—C5—C4122.07 (11)H13A—C13—H13B107.6
C7—C6—C5121.88 (12)
C11—S2—C1—C10173.57 (8)O2—N1—C8—C7−0.47 (18)
C11—S2—C1—C2−64.20 (9)O1—N1—C8—C7179.39 (12)
C11—S2—C1—S160.08 (7)C7—C8—C9—C101.89 (18)
C13—S1—C1—C10−173.77 (8)N1—C8—C9—C10−178.31 (11)
C13—S1—C1—C264.78 (10)C8—C9—C10—C5−1.31 (17)
C13—S1—C1—S2−58.40 (8)C8—C9—C10—C1179.70 (11)
C10—C1—C2—C3−45.80 (14)C6—C5—C10—C90.02 (17)
S2—C1—C2—C3−165.44 (8)C4—C5—C10—C9178.31 (11)
S1—C1—C2—C371.36 (12)C6—C5—C10—C1178.98 (11)
C1—C2—C3—C464.05 (14)C4—C5—C10—C1−2.73 (18)
C2—C3—C4—C5−49.41 (15)C2—C1—C10—C9−165.62 (11)
C3—C4—C5—C6−161.70 (12)S2—C1—C10—C9−44.44 (13)
C3—C4—C5—C1020.01 (17)S1—C1—C10—C972.78 (12)
C10—C5—C6—C70.79 (19)C2—C1—C10—C515.41 (16)
C4—C5—C6—C7−177.56 (12)S2—C1—C10—C5136.59 (10)
C5—C6—C7—C8−0.27 (19)S1—C1—C10—C5−106.18 (11)
C6—C7—C8—C9−1.09 (19)C1—S2—C11—C12−61.71 (11)
C6—C7—C8—N1179.11 (11)S2—C11—C12—C1365.29 (14)
O2—N1—C8—C9179.72 (12)C11—C12—C13—S1−62.18 (14)
O1—N1—C8—C9−0.42 (17)C1—S1—C13—C1256.76 (11)
D—H···AD—HH···AD···AD—H···A
C13—H13A···O1i0.972.583.4565 (18)151
C7—H7A···Cg1ii0.932.823.7164 (15)162
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C13—H13A⋯O1i0.972.583.4565 (18)151
C7—H7ACg1ii0.932.823.7164 (15)162

Symmetry codes: (i) ; (ii) . Cg1 is the centroid of the C5–C10 benzene ring.

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