Literature DB >> 21581949

2-(4-Nitro-phen-yl)-1,3-dithiane.

Hoong-Kun Fun, Reza Kia, Annada C Maity, Shyamaprosad Goswami.   

Abstract

The nitro group in the title compound, C(10)H(11)NO(2)S(2), is almost coplanar with the benzene ring, making a dihedral angle of 3.42 (8)°. The 1,3-dithiane ring adopts a chair conformation. The crystal structure is stabilized by inter-molecular C-H⋯O and C-H⋯π [C⋯Cg = 3.4972 (10) Å] inter-actions.

Entities:  

Year:  2009        PMID: 21581949      PMCID: PMC2968144          DOI: 10.1107/S1600536809001809

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For the calculation of ring puckering parameters, see: Cremer & Pople (1975 ▶). For related literature and applications see, for example: Goswami & Maity (2008 ▶); Fun et al. (2009 ▶).

Experimental

Crystal data

C10H11NO2S2 M = 241.32 Orthorhombic, a = 8.7724 (1) Å b = 10.2079 (1) Å c = 11.9942 (1) Å V = 1074.05 (2) Å3 Z = 4 Mo Kα radiation μ = 0.47 mm−1 T = 100 (1) K 0.46 × 0.22 × 0.08 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (; Bruker, 2005 ▶) T min = 0.813, T max = 0.964 30643 measured reflections 4725 independent reflections 4511 reflections with I > 2σ(I) R int = 0.038

Refinement

R[F 2 > 2σ(F 2)] = 0.024 wR(F 2) = 0.061 S = 1.06 4725 reflections 136 parameters H-atom parameters constrained Δρmax = 0.33 e Å−3 Δρmin = −0.25 e Å−3 Absolute structure: Flack (1983 ▶), 2050 Friedel pairs Flack parameter: 0.01 (4) Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809001809/tk2357sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809001809/tk2357Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H11NO2S2F(000) = 504
Mr = 241.32Dx = 1.492 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 9979 reflections
a = 8.7724 (1) Åθ = 2.6–38.5°
b = 10.2079 (1) ŵ = 0.47 mm1
c = 11.9942 (1) ÅT = 100 K
V = 1074.05 (2) Å3Block, colourless
Z = 40.46 × 0.22 × 0.08 mm
Bruker SMART APEXII CCD area-detector diffractometer4725 independent reflections
Radiation source: fine-focus sealed tube4511 reflections with I > 2σ(I)
graphiteRint = 0.038
φ and ω scansθmax = 35.0°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −14→14
Tmin = 0.813, Tmax = 0.964k = −16→16
30643 measured reflectionsl = −18→19
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.024H-atom parameters constrained
wR(F2) = 0.061w = 1/[σ2(Fo2) + (0.0321P)2 + 0.1305P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max = 0.001
4725 reflectionsΔρmax = 0.33 e Å3
136 parametersΔρmin = −0.25 e Å3
0 restraintsAbsolute structure: Flack (1983), 2050 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.01 (4)
Experimental. The low-temperature data was collected with the Oxford Cyrosystem Cobra low-temperature attachment.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.78978 (3)0.06239 (2)0.216265 (18)0.01399 (5)
S21.07695 (3)0.22170 (2)0.261209 (18)0.01492 (5)
O10.99728 (9)0.26901 (8)−0.32568 (6)0.01819 (14)
O21.12536 (10)0.08795 (8)−0.33808 (6)0.02137 (15)
N11.05536 (9)0.17161 (8)−0.28383 (7)0.01391 (13)
C10.80248 (11)0.03483 (9)0.36543 (8)0.01526 (16)
H1A0.70090.01820.39410.018*
H1B0.8631−0.04310.37850.018*
C20.87227 (11)0.14837 (10)0.43022 (8)0.01481 (15)
H2A0.81570.22760.41350.018*
H2B0.86180.13120.50940.018*
C31.03975 (11)0.17104 (11)0.40367 (8)0.01636 (17)
H3A1.09540.09070.41820.020*
H3B1.07900.23760.45380.020*
C40.99151 (10)0.08515 (9)0.18616 (7)0.01235 (15)
H4A1.04630.00460.20550.015*
C51.01013 (10)0.11049 (9)0.06296 (7)0.01189 (14)
C61.09657 (10)0.02450 (9)−0.00171 (7)0.01299 (15)
H6A1.1440−0.04680.03180.016*
C71.11247 (10)0.04450 (9)−0.11583 (8)0.01293 (15)
H7A1.1690−0.0131−0.15930.016*
C81.04185 (10)0.15252 (9)−0.16301 (7)0.01169 (14)
C90.95653 (11)0.24152 (9)−0.10131 (8)0.01406 (16)
H9A0.91140.3138−0.13510.017*
C100.94071 (11)0.21912 (9)0.01268 (7)0.01455 (15)
H10A0.88360.27680.05580.017*
U11U22U33U12U13U23
S10.01279 (8)0.01716 (10)0.01201 (9)−0.00234 (7)−0.00105 (7)−0.00003 (8)
S20.01512 (9)0.01748 (10)0.01216 (9)−0.00450 (7)0.00056 (7)−0.00083 (7)
O10.0228 (3)0.0179 (3)0.0138 (3)0.0016 (3)−0.0017 (3)0.0050 (3)
O20.0286 (4)0.0219 (4)0.0136 (3)0.0056 (3)0.0052 (3)−0.0013 (3)
N10.0149 (3)0.0152 (3)0.0117 (3)−0.0013 (3)0.0008 (3)0.0010 (3)
C10.0167 (4)0.0169 (4)0.0121 (4)−0.0023 (3)0.0021 (3)0.0002 (3)
C20.0148 (4)0.0183 (4)0.0113 (4)−0.0002 (3)0.0016 (3)−0.0019 (3)
C30.0147 (4)0.0236 (4)0.0108 (4)−0.0019 (3)−0.0012 (3)−0.0010 (3)
C40.0133 (3)0.0137 (4)0.0100 (3)0.0006 (3)−0.0004 (3)0.0001 (3)
C50.0127 (3)0.0127 (3)0.0103 (3)0.0002 (3)−0.0003 (3)0.0006 (3)
C60.0142 (4)0.0128 (3)0.0120 (3)0.0023 (3)0.0001 (3)0.0017 (3)
C70.0130 (3)0.0134 (4)0.0124 (3)0.0009 (3)0.0007 (3)−0.0006 (3)
C80.0130 (3)0.0131 (4)0.0090 (3)−0.0012 (3)0.0005 (3)0.0008 (3)
C90.0169 (4)0.0130 (4)0.0123 (4)0.0025 (3)0.0000 (3)0.0015 (3)
C100.0182 (4)0.0139 (4)0.0116 (3)0.0034 (3)0.0007 (3)0.0000 (3)
S1—C11.8145 (9)C3—H3B0.9700
S1—C41.8210 (9)C4—C51.5090 (12)
S2—C31.8148 (10)C4—H4A0.9800
S2—C41.8208 (9)C5—C61.3953 (13)
O1—N11.2248 (10)C5—C101.4016 (13)
O2—N11.2368 (11)C6—C71.3910 (13)
N1—C81.4670 (11)C6—H6A0.9300
C1—C21.5238 (13)C7—C81.3855 (12)
C1—H1A0.9700C7—H7A0.9300
C1—H1B0.9700C8—C91.3905 (13)
C2—C31.5210 (13)C9—C101.3930 (13)
C2—H2A0.9700C9—H9A0.9300
C2—H2B0.9700C10—H10A0.9300
C3—H3A0.9700
C1—S1—C498.95 (4)C5—C4—S1108.74 (6)
C3—S2—C499.98 (4)S2—C4—S1113.56 (5)
O1—N1—O2123.46 (8)C5—C4—H4A108.8
O1—N1—C8118.63 (8)S2—C4—H4A108.8
O2—N1—C8117.91 (8)S1—C4—H4A108.8
C2—C1—S1114.18 (6)C6—C5—C10119.65 (8)
C2—C1—H1A108.7C6—C5—C4119.69 (8)
S1—C1—H1A108.7C10—C5—C4120.66 (8)
C2—C1—H1B108.7C7—C6—C5120.61 (8)
S1—C1—H1B108.7C7—C6—H6A119.7
H1A—C1—H1B107.6C5—C6—H6A119.7
C3—C2—C1113.39 (8)C8—C7—C6118.28 (8)
C3—C2—H2A108.9C8—C7—H7A120.9
C1—C2—H2A108.9C6—C7—H7A120.9
C3—C2—H2B108.9C7—C8—C9122.91 (8)
C1—C2—H2B108.9C7—C8—N1118.23 (8)
H2A—C2—H2B107.7C9—C8—N1118.85 (8)
C2—C3—S2114.47 (6)C8—C9—C10117.95 (8)
C2—C3—H3A108.6C8—C9—H9A121.0
S2—C3—H3A108.6C10—C9—H9A121.0
C2—C3—H3B108.6C9—C10—C5120.59 (8)
S2—C3—H3B108.6C9—C10—H10A119.7
H3A—C3—H3B107.6C5—C10—H10A119.7
C5—C4—S2107.96 (6)
C4—S1—C1—C260.04 (8)C4—C5—C6—C7178.61 (8)
S1—C1—C2—C3−66.54 (10)C5—C6—C7—C80.73 (13)
C1—C2—C3—S264.81 (10)C6—C7—C8—C90.18 (14)
C4—S2—C3—C2−57.45 (8)C6—C7—C8—N1−178.43 (8)
C3—S2—C4—C5179.49 (6)O1—N1—C8—C7−177.77 (8)
C3—S2—C4—S158.85 (6)O2—N1—C8—C72.17 (12)
C1—S1—C4—C5−179.95 (6)O1—N1—C8—C93.56 (12)
C1—S1—C4—S2−59.74 (6)O2—N1—C8—C9−176.50 (9)
S2—C4—C5—C6117.37 (8)C7—C8—C9—C10−0.79 (14)
S1—C4—C5—C6−119.01 (8)N1—C8—C9—C10177.81 (8)
S2—C4—C5—C10−63.01 (10)C8—C9—C10—C50.50 (14)
S1—C4—C5—C1060.60 (10)C6—C5—C10—C90.38 (14)
C10—C5—C6—C7−1.01 (14)C4—C5—C10—C9−179.24 (9)
D—H···AD—HH···AD···AD—H···A
C6—H6A···O2i0.932.593.3346 (12)137
C1—H1A···Cg1ii0.972.603.4972 (10)154
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C6—H6A⋯O2i0.932.593.3346 (12)137
C1—H1ACg1ii0.972.603.4972 (10)154

Symmetry codes: (i) ; (ii) . Cg1 is the centroid of the benzene ring.

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Authors:  Hoong-Kun Fun; Reza Kia; Annada C Maity; Shyamaprosad Goswami
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-12-20
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