Literature DB >> 22719512

2-[(E)-3,4-Dimeth-oxy-benzyl-idene]hydrazinecarboxamide.

M Nawaz Tahir, M Naveed Umar, Akbar Ali, Hazoor Ahmad Shad.   

Abstract

In the title compound, C(10)H(13)N(3)O(3), the 3,4-dimeth-oxy-benzyl-idene and hydrazinecarboxamide groups are oriented at a dihedral angle of 53.82 (6)° and an intra-molecular N-H⋯N hydrogen bond generates an S(5) ring motif. In the crystal, mol-ecules are linked by N-H⋯O hydrogen bonds into sheets propagating in (-201), which feature R(1) (2)(5), R(2) (2)(8) and R(2) (4)(14) loops.

Entities:  

Year:  2012        PMID: 22719512      PMCID: PMC3379314          DOI: 10.1107/S1600536812020739

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Fun et al. (2011 ▶); Liang et al. (2007 ▶); For graph-set notation, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C10H13N3O3 M = 223.23 Monoclinic, a = 22.2300 (7) Å b = 7.6367 (3) Å c = 15.6482 (6) Å β = 126.234 (1)° V = 2142.76 (14) Å3 Z = 8 Mo Kα radiation μ = 0.10 mm−1 T = 296 K 0.25 × 0.18 × 0.15 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.975, T max = 0.985 7933 measured reflections 2115 independent reflections 1389 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.121 S = 1.01 2115 reflections 147 parameters H-atom parameters constrained Δρmax = 0.16 e Å−3 Δρmin = −0.20 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812020739/hb6783sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812020739/hb6783Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812020739/hb6783Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H13N3O3F(000) = 944
Mr = 223.23Dx = 1.384 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 1389 reflections
a = 22.2300 (7) Åθ = 2.3–26.0°
b = 7.6367 (3) ŵ = 0.10 mm1
c = 15.6482 (6) ÅT = 296 K
β = 126.234 (1)°Prism, yellow
V = 2142.76 (14) Å30.25 × 0.18 × 0.15 mm
Z = 8
Bruker Kappa APEXII CCD diffractometer2115 independent reflections
Radiation source: fine-focus sealed tube1389 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.040
Detector resolution: 8.00 pixels mm-1θmax = 26.0°, θmin = 2.3°
ω scansh = −26→27
Absorption correction: multi-scan (SADABS; Bruker, 2005)k = −9→9
Tmin = 0.975, Tmax = 0.985l = −19→19
7933 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.121H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0592P)2 + 0.0283P] where P = (Fo2 + 2Fc2)/3
2115 reflections(Δ/σ)max < 0.001
147 parametersΔρmax = 0.16 e Å3
0 restraintsΔρmin = −0.20 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.30582 (7)−0.13305 (19)0.72476 (10)0.0464 (5)
O20.34785 (7)0.03543 (19)0.62646 (10)0.0454 (5)
O3−0.01303 (7)0.24827 (17)−0.02345 (10)0.0447 (5)
N10.10093 (8)0.0967 (2)0.23838 (12)0.0404 (5)
N20.04892 (8)0.0982 (2)0.12929 (12)0.0421 (5)
N30.06302 (9)0.3952 (2)0.13090 (13)0.0445 (6)
C10.15297 (10)−0.0591 (2)0.40077 (15)0.0347 (6)
C20.22548 (10)0.0085 (2)0.45703 (15)0.0356 (6)
C30.27503 (10)−0.0179 (2)0.56479 (14)0.0331 (6)
C40.25221 (10)−0.1097 (2)0.61917 (15)0.0345 (6)
C50.18023 (10)−0.1725 (3)0.56366 (15)0.0394 (7)
C60.13153 (10)−0.1495 (3)0.45538 (15)0.0397 (7)
C70.28984 (13)−0.2490 (3)0.78007 (16)0.0527 (8)
C80.37782 (11)0.1099 (3)0.57544 (17)0.0490 (8)
C90.10014 (10)−0.0369 (3)0.28603 (15)0.0400 (7)
C100.03155 (9)0.2502 (3)0.07501 (15)0.0347 (6)
H20.240280.071570.421520.0427*
H2A0.027640.002350.096010.0505*
H3A0.052960.494430.099220.0534*
H3B0.093510.389930.198850.0534*
H50.16442−0.230700.599360.0473*
H60.08359−0.195430.418570.0476*
H7A0.24962−0.202380.779790.0791*
H7B0.33332−0.261560.851850.0791*
H7C0.27580−0.361310.745910.0791*
H8A0.351950.216750.540770.0735*
H8B0.371810.028960.523970.0735*
H8C0.429870.134230.627230.0735*
H90.06472−0.123600.246580.0479*
U11U22U33U12U13U23
O10.0482 (8)0.0532 (9)0.0289 (8)−0.0080 (7)0.0179 (7)0.0017 (7)
O20.0369 (8)0.0576 (9)0.0338 (8)−0.0152 (7)0.0165 (7)−0.0050 (7)
O30.0471 (8)0.0416 (9)0.0264 (7)0.0006 (6)0.0113 (7)−0.0004 (6)
N10.0408 (9)0.0384 (10)0.0272 (9)0.0008 (7)0.0120 (8)−0.0009 (7)
N20.0448 (10)0.0355 (9)0.0263 (9)−0.0042 (8)0.0102 (8)−0.0018 (7)
N30.0476 (10)0.0351 (10)0.0320 (10)−0.0030 (8)0.0132 (8)−0.0010 (7)
C10.0362 (10)0.0307 (10)0.0330 (11)0.0031 (8)0.0181 (9)−0.0009 (8)
C20.0401 (11)0.0327 (11)0.0345 (11)−0.0023 (8)0.0224 (9)−0.0013 (8)
C30.0321 (10)0.0330 (10)0.0303 (11)−0.0042 (8)0.0163 (9)−0.0062 (8)
C40.0374 (10)0.0335 (10)0.0304 (10)0.0001 (8)0.0188 (9)−0.0022 (8)
C50.0417 (11)0.0418 (12)0.0394 (12)−0.0001 (9)0.0266 (10)0.0031 (9)
C60.0307 (10)0.0406 (12)0.0421 (12)0.0005 (9)0.0184 (9)0.0015 (9)
C70.0604 (14)0.0619 (16)0.0364 (12)−0.0022 (11)0.0289 (11)0.0071 (11)
C80.0462 (12)0.0524 (14)0.0524 (14)−0.0126 (10)0.0313 (12)−0.0047 (11)
C90.0350 (11)0.0397 (12)0.0337 (11)−0.0015 (9)0.0140 (10)−0.0014 (9)
C100.0289 (10)0.0391 (11)0.0294 (10)−0.0001 (8)0.0136 (9)−0.0010 (9)
O1—C41.362 (2)C2—C31.379 (3)
O1—C71.422 (3)C3—C41.408 (3)
O2—C31.368 (3)C4—C51.379 (3)
O2—C81.426 (3)C5—C61.380 (3)
O3—C101.245 (2)C2—H20.9300
N1—N21.385 (2)C5—H50.9300
N1—C91.270 (3)C6—H60.9300
N2—C101.353 (3)C7—H7A0.9600
N3—C101.326 (3)C7—H7B0.9600
N2—H2A0.8600C7—H7C0.9600
N3—H3A0.8600C8—H8A0.9600
N3—H3B0.8600C8—H8B0.9600
C1—C91.463 (3)C8—H8C0.9600
C1—C21.401 (3)C9—H90.9300
C1—C61.384 (3)
C4—O1—C7117.75 (18)N2—C10—N3117.33 (17)
C3—O2—C8118.26 (15)O3—C10—N2119.32 (19)
N2—N1—C9116.05 (17)C1—C2—H2120.00
N1—N2—C10120.10 (15)C3—C2—H2120.00
N1—N2—H2A120.00C4—C5—H5120.00
C10—N2—H2A120.00C6—C5—H5120.00
C10—N3—H3A120.00C1—C6—H6120.00
C10—N3—H3B120.00C5—C6—H6120.00
H3A—N3—H3B120.00O1—C7—H7A109.00
C2—C1—C6118.95 (18)O1—C7—H7B109.00
C2—C1—C9121.3 (2)O1—C7—H7C109.00
C6—C1—C9119.7 (2)H7A—C7—H7B109.00
C1—C2—C3120.4 (2)H7A—C7—H7C109.00
C2—C3—C4119.9 (2)H7B—C7—H7C109.00
O2—C3—C4114.88 (16)O2—C8—H8A109.00
O2—C3—C2125.2 (2)O2—C8—H8B109.00
O1—C4—C5125.2 (2)O2—C8—H8C109.00
O1—C4—C3115.4 (2)H8A—C8—H8B109.00
C3—C4—C5119.39 (18)H8A—C8—H8C109.00
C4—C5—C6120.3 (2)H8B—C8—H8C109.00
C1—C6—C5121.0 (2)N1—C9—H9119.00
N1—C9—C1122.29 (19)C1—C9—H9119.00
O3—C10—N3123.4 (2)
C7—O1—C4—C3−169.75 (18)C2—C1—C9—N1−31.7 (3)
C7—O1—C4—C58.3 (3)C6—C1—C9—N1148.8 (2)
C8—O2—C3—C2−6.2 (3)C1—C2—C3—O2176.97 (18)
C8—O2—C3—C4172.38 (17)C1—C2—C3—C4−1.5 (3)
C9—N1—N2—C10162.2 (2)O2—C3—C4—O1−0.4 (2)
N2—N1—C9—C1178.4 (2)O2—C3—C4—C5−178.58 (18)
N1—N2—C10—O3177.1 (2)C2—C3—C4—O1178.23 (17)
N1—N2—C10—N3−3.6 (3)C2—C3—C4—C50.1 (3)
C6—C1—C2—C31.3 (3)O1—C4—C5—C6−176.4 (2)
C9—C1—C2—C3−178.29 (19)C3—C4—C5—C61.6 (3)
C2—C1—C6—C50.4 (3)C4—C5—C6—C1−1.9 (3)
C9—C1—C6—C5180.0 (2)
D—H···AD—HH···AD···AD—H···A
N2—H2A···O3i0.862.152.970 (2)159
N3—H3A···O3ii0.862.193.044 (2)170
N3—H3B···N10.862.302.657 (2)105
N3—H3B···O1iii0.862.593.019 (2)112
N3—H3B···O2iii0.862.303.119 (2)160
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2A⋯O3i0.862.152.970 (2)159
N3—H3A⋯O3ii0.862.193.044 (2)170
N3—H3B⋯N10.862.302.657 (2)105
N3—H3B⋯O1iii0.862.593.019 (2)112
N3—H3B⋯O2iii0.862.303.119 (2)160

Symmetry codes: (i) ; (ii) ; (iii) .

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  (E)-2-(4-Hy-droxy-3-meth-oxy-benzyl-idene)hydrazinecarboxamide.

Authors:  Hoong-Kun Fun; Chin Sing Yeap; Shridhar Malladi; Arun M Isloor
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-06-25

3.  Structure validation in chemical crystallography.

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1.  (2E)-2-(4-Hy-droxy-3-meth-oxy-benzyl-idene)hydrazinecarboxamide.

Authors:  M Nawaz Tahir; Akbar Ali; M Naveed Umar; Ishtiaq Hussain; Hazoor Ahmad Shad
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  1 in total

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