Literature DB >> 22719430

1,1'-Bicyclo-hexyl-1,1'-diyl 1,1'-biphenyl-2,2'-dicarboxyl-ate.

Hoong-Kun Fun, Ching Kheng Quah, Dongdong Wu, Yan Zhang.   

Abstract

The title compound, C(26)H(28)O(4), lies about a crystallographic twofold rotation axis. The cyclo-hexane rings adopt a chair conformation. The two benzene rings form a dihedral angle of 40.82 (3)°. No significant intra- or inter-molecular inter-actions are observed in the crystal structure.

Entities:  

Year:  2012        PMID: 22719430      PMCID: PMC3379232          DOI: 10.1107/S1600536812018478

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to and the biological activity of the title compound, see: Lei et al. (2004 ▶); Wu et al. (2002 ▶, 2012 ▶); Quideau et al. (1996 ▶); Yoshimura et al. (2008 ▶). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986 ▶). For standard bond-length data, see: Allen et al. (1987 ▶). For ring conformations, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C26H28O4 M = 404.48 Monoclinic, a = 16.8289 (7) Å b = 10.5919 (5) Å c = 11.4752 (5) Å β = 99.967 (1)° V = 2014.58 (15) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 100 K 0.38 × 0.37 × 0.37 mm

Data collection

Bruker SMART APEXII DUO CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.967, T max = 0.968 16772 measured reflections 4382 independent reflections 4006 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.107 S = 1.05 4382 reflections 136 parameters H-atom parameters constrained Δρmax = 0.47 e Å−3 Δρmin = −0.23 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812018478/is5122sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812018478/is5122Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812018478/is5122Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C26H28O4F(000) = 864
Mr = 404.48Dx = 1.334 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 9620 reflections
a = 16.8289 (7) Åθ = 4.2–35.0°
b = 10.5919 (5) ŵ = 0.09 mm1
c = 11.4752 (5) ÅT = 100 K
β = 99.967 (1)°Block, colourless
V = 2014.58 (15) Å30.38 × 0.37 × 0.37 mm
Z = 4
Bruker SMART APEXII DUO CCD area-detector diffractometer4382 independent reflections
Radiation source: fine-focus sealed tube4006 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.019
φ and ω scansθmax = 35.0°, θmin = 4.2°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −21→27
Tmin = 0.967, Tmax = 0.968k = −17→12
16772 measured reflectionsl = −18→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.107H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0621P)2 + 0.7551P] where P = (Fo2 + 2Fc2)/3
4382 reflections(Δ/σ)max = 0.001
136 parametersΔρmax = 0.47 e Å3
0 restraintsΔρmin = −0.23 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.42941 (3)0.08237 (4)0.17817 (4)0.01098 (9)
O20.41218 (3)0.19432 (4)0.34309 (4)0.01462 (9)
C10.35947 (4)0.30612 (6)0.05831 (5)0.01532 (11)
H1A0.32780.23560.03460.018*
C20.34982 (4)0.41537 (6)−0.01047 (6)0.01852 (12)
H2A0.31120.4184−0.07900.022*
C30.39828 (4)0.51981 (6)0.02401 (6)0.01974 (12)
H3A0.39150.5936−0.02050.024*
C40.45706 (4)0.51343 (6)0.12541 (6)0.01746 (11)
H4A0.49030.58280.14630.021*
C50.46751 (3)0.40532 (5)0.19691 (5)0.01327 (10)
C60.41629 (3)0.30170 (5)0.16241 (5)0.01239 (10)
C70.41890 (3)0.18771 (5)0.24002 (5)0.01133 (10)
C80.45225 (3)−0.04149 (5)0.23283 (5)0.01039 (9)
C90.42275 (3)−0.13489 (5)0.13258 (5)0.01332 (10)
H9A0.4472−0.11350.06460.016*
H9B0.4405−0.21920.15800.016*
C100.33088 (4)−0.13507 (6)0.09545 (6)0.01723 (11)
H10A0.3136−0.05400.06060.021*
H10B0.3156−0.19950.03570.021*
C110.28797 (4)−0.16018 (7)0.19990 (6)0.01998 (12)
H11A0.2992−0.24570.22830.024*
H11B0.2302−0.15200.17460.024*
C120.31654 (4)−0.06665 (6)0.29988 (6)0.01688 (11)
H12A0.2913−0.08680.36750.020*
H12B0.30030.01810.27390.020*
C130.40844 (3)−0.07157 (5)0.33654 (5)0.01320 (10)
H13A0.4241−0.15510.36680.016*
H13B0.4250−0.01130.39980.016*
U11U22U33U12U13U23
O10.01283 (17)0.00808 (16)0.01182 (17)0.00106 (12)0.00151 (13)0.00043 (12)
O20.01673 (19)0.01344 (19)0.01440 (18)0.00038 (14)0.00467 (14)−0.00096 (13)
C10.0149 (2)0.0138 (2)0.0166 (2)0.00300 (17)0.00097 (18)0.00128 (17)
C20.0185 (3)0.0183 (3)0.0184 (3)0.0063 (2)0.0021 (2)0.0042 (2)
C30.0218 (3)0.0154 (3)0.0227 (3)0.0061 (2)0.0056 (2)0.0066 (2)
C40.0194 (3)0.0105 (2)0.0231 (3)0.00200 (18)0.0056 (2)0.00334 (19)
C50.0143 (2)0.0090 (2)0.0169 (2)0.00124 (16)0.00385 (17)0.00066 (16)
C60.0132 (2)0.0093 (2)0.0148 (2)0.00178 (16)0.00282 (17)0.00097 (16)
C70.0099 (2)0.0095 (2)0.0145 (2)0.00032 (15)0.00178 (16)−0.00049 (15)
C80.0114 (2)0.00798 (19)0.0115 (2)−0.00010 (15)0.00114 (15)0.00068 (15)
C90.0140 (2)0.0106 (2)0.0143 (2)−0.00026 (16)−0.00064 (17)−0.00214 (16)
C100.0144 (2)0.0169 (2)0.0187 (3)−0.00241 (18)−0.00193 (19)−0.00231 (19)
C110.0146 (2)0.0195 (3)0.0248 (3)−0.0057 (2)0.0004 (2)0.0012 (2)
C120.0132 (2)0.0189 (3)0.0191 (2)−0.00175 (18)0.00416 (19)0.00251 (19)
C130.0133 (2)0.0133 (2)0.0132 (2)−0.00114 (16)0.00258 (17)0.00192 (16)
O1—C71.3503 (7)C8—C131.5379 (8)
O1—C81.4760 (7)C8—C8i1.5872 (11)
O2—C71.2095 (7)C9—C101.5310 (8)
C1—C21.3942 (8)C9—H9A0.9700
C1—C61.3958 (8)C9—H9B0.9700
C1—H1A0.9300C10—C111.5258 (10)
C2—C31.3906 (10)C10—H10A0.9700
C2—H2A0.9300C10—H10B0.9700
C3—C41.3923 (10)C11—C121.5290 (10)
C3—H3A0.9300C11—H11A0.9700
C4—C51.4020 (8)C11—H11B0.9700
C4—H4A0.9300C12—C131.5318 (8)
C5—C61.4094 (8)C12—H12A0.9700
C5—C5i1.4896 (12)C12—H12B0.9700
C6—C71.4964 (8)C13—H13A0.9700
C8—C91.5332 (8)C13—H13B0.9700
C7—O1—C8124.00 (4)C10—C9—H9A109.0
C2—C1—C6120.51 (6)C8—C9—H9A109.0
C2—C1—H1A119.7C10—C9—H9B109.0
C6—C1—H1A119.7C8—C9—H9B109.0
C3—C2—C1119.61 (6)H9A—C9—H9B107.8
C3—C2—H2A120.2C11—C10—C9111.97 (5)
C1—C2—H2A120.2C11—C10—H10A109.2
C2—C3—C4119.74 (6)C9—C10—H10A109.2
C2—C3—H3A120.1C11—C10—H10B109.2
C4—C3—H3A120.1C9—C10—H10B109.2
C3—C4—C5121.85 (6)H10A—C10—H10B107.9
C3—C4—H4A119.1C10—C11—C12110.27 (5)
C5—C4—H4A119.1C10—C11—H11A109.6
C4—C5—C6117.58 (6)C12—C11—H11A109.6
C4—C5—C5i118.60 (4)C10—C11—H11B109.6
C6—C5—C5i123.81 (4)C12—C11—H11B109.6
C1—C6—C5120.62 (5)H11A—C11—H11B108.1
C1—C6—C7118.79 (5)C11—C12—C13110.82 (5)
C5—C6—C7120.51 (5)C11—C12—H12A109.5
O2—C7—O1127.21 (5)C13—C12—H12A109.5
O2—C7—C6122.49 (5)C11—C12—H12B109.5
O1—C7—C6110.30 (5)C13—C12—H12B109.5
O1—C8—C9103.18 (4)H12A—C12—H12B108.1
O1—C8—C13112.87 (4)C12—C13—C8112.14 (5)
C9—C8—C13108.10 (4)C12—C13—H13A109.2
O1—C8—C8i106.46 (3)C8—C13—H13A109.2
C9—C8—C8i111.63 (4)C12—C13—H13B109.2
C13—C8—C8i114.10 (5)C8—C13—H13B109.2
C10—C9—C8112.94 (5)H13A—C13—H13B107.9
C6—C1—C2—C31.18 (10)C1—C6—C7—O156.26 (7)
C1—C2—C3—C41.34 (10)C5—C6—C7—O1−126.93 (5)
C2—C3—C4—C5−2.06 (10)C7—O1—C8—C9157.39 (5)
C3—C4—C5—C60.24 (9)C7—O1—C8—C1340.97 (7)
C3—C4—C5—C5i179.20 (6)C7—O1—C8—C8i−84.97 (6)
C2—C1—C6—C5−3.04 (9)O1—C8—C9—C10−64.78 (6)
C2—C1—C6—C7173.76 (5)C13—C8—C9—C1054.98 (6)
C4—C5—C6—C12.29 (8)C8i—C8—C9—C10−178.73 (4)
C5i—C5—C6—C1−176.60 (6)C8—C9—C10—C11−55.23 (7)
C4—C5—C6—C7−174.45 (5)C9—C10—C11—C1254.07 (7)
C5i—C5—C6—C76.65 (10)C10—C11—C12—C13−55.70 (7)
C8—O1—C7—O2−13.97 (9)C11—C12—C13—C858.70 (6)
C8—O1—C7—C6166.08 (5)O1—C8—C13—C1256.62 (6)
C1—C6—C7—O2−123.70 (6)C9—C8—C13—C12−56.84 (6)
C5—C6—C7—O253.11 (8)C8i—C8—C13—C12178.33 (4)
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