Literature DB >> 22715289

Origin and evolution of carnivorism in the Ascomycota (fungi).

Ence Yang1, Lingling Xu, Ying Yang, Xinyu Zhang, Meichun Xiang, Chengshu Wang, Zhiqiang An, Xingzhong Liu.   

Abstract

Carnivorism is one of the basic life strategies of fungi. Carnivorous fungi possess the ability to trap and digest their preys by sophisticated trapping devices. However, the origin and development of fungal carnivorism remains a gap in evolution biology. In this study, five protein-encoding genes were used to construct the phylogeny of the carnivorous fungi in the phylum Ascomycota; these fungi prey on nematodes by means of specialized trapping structures such as constricting rings and adhesive traps. Our analysis revealed a definitive pattern of evolutionary development for these trapping structures. Molecular clock calibration based on two fossil records revealed that fungal carnivorism diverged from saprophytism about 419 Mya, which was after the origin of nematodes about 550-600 Mya. Active carnivorism (fungi with constricting rings) and passive carnivorism (fungi with adhesive traps) diverged from each other around 246 Mya, shortly after the occurrence of the Permian-Triassic extinction event about 251.4 Mya. The major adhesive traps evolved around 198-208 Mya, which was within the time frame of the Triassic-Jurassic extinction event about 201.4 Mya. However, no major carnivorous ascomycetes divergence was correlated to the Cretaceous-Tertiary extinction event, which occurred more recently (about 65.5 Mya). Therefore, a causal relationship between mass extinction events and fungal carnivorism evolution is not validated in this study. More evidence including additional fossil records is needed to establish if fungal carnivorism evolution was a response to mass extinction events.

Mesh:

Year:  2012        PMID: 22715289      PMCID: PMC3390824          DOI: 10.1073/pnas.1120915109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  29 in total

Review 1.  NEMATODE- TRAPPING FUNGI. AN INTRIGUING GROUP OF CARNIVOROUS PLANTS INHABIT THE MICROBIAL WORLD.

Authors:  D PRAMER
Journal:  Science       Date:  1964-04-24       Impact factor: 47.728

2.  Phylogenetics and evolution of nematode-trapping fungi (Orbiliales) estimated from nuclear and protein coding genes.

Authors:  Yan Li; Kevin D Hyde; Rajesh Jeewon; Lei Cai; Dhanasekaran Vijaykrishna; Keqin Zhang
Journal:  Mycologia       Date:  2005 Sep-Oct       Impact factor: 2.696

3.  Geomycology: biogeochemical transformations of rocks, minerals, metals and radionuclides by fungi, bioweathering and bioremediation.

Authors:  Geoffrey M Gadd
Journal:  Mycol Res       Date:  2007-01

4.  Evolution of nematode-trapping cells of predatory fungi of the Orbiliaceae based on evidence from rRNA-encoding DNA and multiprotein sequences.

Authors:  Ying Yang; Ence Yang; Zhiqiang An; Xingzhong Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-09       Impact factor: 11.205

5.  Palaeoanellus dimorphus gen. et sp. nov. (Deuteromycotina): a Cretaceous predatory fungus.

Authors:  Alexander R Schmidt; Heinrich Dörfelt; Vincent Perrichot
Journal:  Am J Bot       Date:  2008-10       Impact factor: 3.844

Review 6.  Life with 6000 genes.

Authors:  A Goffeau; B G Barrell; H Bussey; R W Davis; B Dujon; H Feldmann; F Galibert; J D Hoheisel; C Jacq; M Johnston; E J Louis; H W Mewes; Y Murakami; P Philippsen; H Tettelin; S G Oliver
Journal:  Science       Date:  1996-10-25       Impact factor: 47.728

7.  Carnivorous mushrooms.

Authors:  R G Thorn; G L Barron
Journal:  Science       Date:  1984-04-06       Impact factor: 47.728

8.  Genome sequencing and comparative transcriptomics of the model entomopathogenic fungi Metarhizium anisopliae and M. acridum.

Authors:  Qiang Gao; Kai Jin; Sheng-Hua Ying; Yongjun Zhang; Guohua Xiao; Yanfang Shang; Zhibing Duan; Xiao Hu; Xue-Qin Xie; Gang Zhou; Guoxiong Peng; Zhibing Luo; Wei Huang; Bing Wang; Weiguo Fang; Sibao Wang; Yi Zhong; Li-Jun Ma; Raymond J St Leger; Guo-Ping Zhao; Yan Pei; Ming-Guang Feng; Yuxian Xia; Chengshu Wang
Journal:  PLoS Genet       Date:  2011-01-06       Impact factor: 5.917

9.  AUGUSTUS: ab initio prediction of alternative transcripts.

Authors:  Mario Stanke; Oliver Keller; Irfan Gunduz; Alec Hayes; Stephan Waack; Burkhard Morgenstern
Journal:  Nucleic Acids Res       Date:  2006-07-01       Impact factor: 16.971

10.  The genome of Nectria haematococca: contribution of supernumerary chromosomes to gene expansion.

Authors:  Jeffrey J Coleman; Steve D Rounsley; Marianela Rodriguez-Carres; Alan Kuo; Catherine C Wasmann; Jane Grimwood; Jeremy Schmutz; Masatoki Taga; Gerard J White; Shiguo Zhou; David C Schwartz; Michael Freitag; Li-Jun Ma; Etienne G J Danchin; Bernard Henrissat; Pedro M Coutinho; David R Nelson; Dave Straney; Carolyn A Napoli; Bridget M Barker; Michael Gribskov; Martijn Rep; Scott Kroken; István Molnár; Christopher Rensing; John C Kennell; Jorge Zamora; Mark L Farman; Eric U Selker; Asaf Salamov; Harris Shapiro; Jasmyn Pangilinan; Erika Lindquist; Casey Lamers; Igor V Grigoriev; David M Geiser; Sarah F Covert; Esteban Temporini; Hans D Vanetten
Journal:  PLoS Genet       Date:  2009-08-28       Impact factor: 5.917

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  24 in total

1.  Evolutionary Conservation and Diversification of Puf RNA Binding Proteins and Their mRNA Targets.

Authors:  Gregory J Hogan; Patrick O Brown; Daniel Herschlag
Journal:  PLoS Biol       Date:  2015-11-20       Impact factor: 8.029

2.  Comparative Analyses of Mitochondrial Genomes Provide Evolutionary Insights Into Nematode-Trapping Fungi.

Authors:  Ying Zhang; Guangzhu Yang; Meiling Fang; Chu Deng; Ke-Qin Zhang; Zefen Yu; Jianping Xu
Journal:  Front Microbiol       Date:  2020-04-15       Impact factor: 5.640

3.  Natural diversity in the predatory behavior facilitates the establishment of a robust model strain for nematode-trapping fungi.

Authors:  Ching-Ting Yang; Guillermo Vidal-Diez de Ulzurrun; A Pedro Gonçalves; Hung-Che Lin; Ching-Wen Chang; Tsung-Yu Huang; Sheng-An Chen; Cheng-Kuo Lai; Isheng J Tsai; Frank C Schroeder; Jason E Stajich; Yen-Ping Hsueh
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-11       Impact factor: 11.205

4.  New insights from molecular phylogenetics of amoebophagous fungi (Zoopagomycota, Zoopagales).

Authors:  Daniele Corsaro; Martina Köhsler; Claudia Wylezich; Danielle Venditti; Julia Walochnik; Rolf Michel
Journal:  Parasitol Res       Date:  2017-11-23       Impact factor: 2.289

5.  Genome-scale phylogenetics reveals a monophyletic Zoopagales (Zoopagomycota, Fungi).

Authors:  William J Davis; Kevin R Amses; Gerald L Benny; Derreck Carter-House; Ying Chang; Igor Grigoriev; Matthew E Smith; Joseph W Spatafora; Jason E Stajich; Timothy Y James
Journal:  Mol Phylogenet Evol       Date:  2019-01-11       Impact factor: 4.286

6.  Dating the diversification of the major lineages of Ascomycota (Fungi).

Authors:  María Prieto; Mats Wedin
Journal:  PLoS One       Date:  2013-06-14       Impact factor: 3.240

7.  Proteolytic activity of extracellular products from Arthrobotrys musiformis and their effect in vitro against Haemonchus contortus infective larvae.

Authors:  Perla María Del Carmen Acevedo-Ramírez; Juan Antonio Figueroa-Castillo; Raúl Ulloa-Arvizú; Luz Gisela Martínez-García; Alberto Guevara-Flores; Juan Luis Rendón; Rosa Ofelia Valero-Coss; Pedro Mendoza-de Gives; Héctor Quiroz-Romero
Journal:  Vet Rec Open       Date:  2015-05-16

8.  Drechslerella stenobrocha genome illustrates the mechanism of constricting rings and the origin of nematode predation in fungi.

Authors:  Keke Liu; Weiwei Zhang; Yiling Lai; Meichun Xiang; Xiuna Wang; Xinyu Zhang; Xingzhong Liu
Journal:  BMC Genomics       Date:  2014-02-08       Impact factor: 3.969

9.  Genetic diversity and recombination in natural populations of the nematode-trapping fungus Arthrobotrys oligospora from China.

Authors:  Ying Zhang; Min Qiao; Jianping Xu; Yang Cao; Ke-Qin Zhang; Ze-Fen Yu
Journal:  Ecol Evol       Date:  2013-01-07       Impact factor: 2.912

10.  Genomic mechanisms accounting for the adaptation to parasitism in nematode-trapping fungi.

Authors:  Tejashwari Meerupati; Karl-Magnus Andersson; Eva Friman; Dharmendra Kumar; Anders Tunlid; Dag Ahrén
Journal:  PLoS Genet       Date:  2013-11-14       Impact factor: 5.917

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