Literature DB >> 17494736

Evolution of nematode-trapping cells of predatory fungi of the Orbiliaceae based on evidence from rRNA-encoding DNA and multiprotein sequences.

Ying Yang1, Ence Yang, Zhiqiang An, Xingzhong Liu.   

Abstract

Among fungi, the basic life strategies are saprophytism, parasitism, and predation. Fungi in Orbiliaceae (Ascomycota) prey on animals by means of specialized trapping structures. Five types of trapping devices are recognized, but their evolutionary origins and divergence are not well understood. Based on comprehensive phylogenetic analysis of nucleotide sequences of three protein-coding genes (RNA polymerase II subunit gene, rpb2; elongation factor 1-alpha gene, ef1-alpha; and ss tubulin gene, bt) and ribosomal DNA in the internal transcribed spacer region, we have demonstrated that the initial trapping structure evolved along two lineages yielding two distinct trapping mechanisms: one developed into constricting rings and the other developed into adhesive traps. Among adhesive trapping devices, the adhesive network separated from the others early and evolved at a steady and gentle speed. The adhesive knob evolved through stalk elongation, with a final development of nonconstricting rings. Our data suggest that the derived adhesive traps are at a highly differentiated stage. The development of trapping devices is felicitous proof of adaptive evolution.

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Year:  2007        PMID: 17494736      PMCID: PMC1895958          DOI: 10.1073/pnas.0702770104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  17 in total

1.  Ribosomal DNA and resolution of branching order among the ascomycota: how many nucleotides are enough?

Authors:  M L Berbee; D A Carmean; K Winka
Journal:  Mol Phylogenet Evol       Date:  2000-12       Impact factor: 4.286

2.  Phylogenetic relationships among ascomycetes: evidence from an RNA polymerse II subunit.

Authors:  Y J Liu; S Whelen; B D Hall
Journal:  Mol Biol Evol       Date:  1999-12       Impact factor: 16.240

3.  Molecular evidence for the early colonization of land by fungi and plants.

Authors:  D S Heckman; D M Geiser; B R Eidell; R L Stauffer; N L Kardos; S B Hedges
Journal:  Science       Date:  2001-08-10       Impact factor: 47.728

4.  Evolution of complex fruiting-body morphologies in homobasidiomycetes.

Authors:  David S Hibbett; Manfred Binder
Journal:  Proc Biol Sci       Date:  2002-10-07       Impact factor: 5.349

Review 5.  NEMATODE- TRAPPING FUNGI. AN INTRIGUING GROUP OF CARNIVOROUS PLANTS INHABIT THE MICROBIAL WORLD.

Authors:  D PRAMER
Journal:  Science       Date:  1964-04-24       Impact factor: 47.728

6.  The timing of eukaryotic evolution: does a relaxed molecular clock reconcile proteins and fossils?

Authors:  Emmanuel J P Douzery; Elizabeth A Snell; Eric Bapteste; Frédéric Delsuc; Hervé Philippe
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-19       Impact factor: 11.205

7.  Phylogenetics and evolution of nematode-trapping fungi (Orbiliales) estimated from nuclear and protein coding genes.

Authors:  Yan Li; Kevin D Hyde; Rajesh Jeewon; Lei Cai; Dhanasekaran Vijaykrishna; Keqin Zhang
Journal:  Mycologia       Date:  2005 Sep-Oct       Impact factor: 2.696

8.  Molecular data from 27 proteins do not support a Precambrian origin of land plants.

Authors:  Michael J Sanderson
Journal:  Am J Bot       Date:  2003-06       Impact factor: 3.844

9.  Phylogeny of nematode-trapping fungi based on 18S rDNA sequences.

Authors:  D Ahrén; B M Ursing; A Tunlid
Journal:  FEMS Microbiol Lett       Date:  1998-01-15       Impact factor: 2.742

10.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors:  J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

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  35 in total

1.  RNA-Seq reveals the molecular mechanism of trapping and killing of root-knot nematodes by nematode-trapping fungi.

Authors:  Ramesh Pandit; Reena Patel; Namrata Patel; Vaibhav Bhatt; Chaitanya Joshi; Pawan Kumar Singh; Anju Kunjadia
Journal:  World J Microbiol Biotechnol       Date:  2017-03-04       Impact factor: 3.312

2.  Underground leaves of Philcoxia trap and digest nematodes.

Authors:  Caio G Pereira; Daniela P Almenara; Carlos E Winter; Peter W Fritsch; Hans Lambers; Rafael S Oliveira
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-09       Impact factor: 11.205

3.  Identification of cellulose-responsive bacterial and fungal communities in geographically and edaphically different soils by using stable isotope probing.

Authors:  Stephanie A Eichorst; Cheryl R Kuske
Journal:  Appl Environ Microbiol       Date:  2012-01-27       Impact factor: 4.792

Review 4.  How carnivorous fungi use three-celled constricting rings to trap nematodes.

Authors:  Keke Liu; Jianqing Tian; Meichun Xiang; Xingzhong Liu
Journal:  Protein Cell       Date:  2012-04-20       Impact factor: 14.870

5.  Origin and evolution of carnivorism in the Ascomycota (fungi).

Authors:  Ence Yang; Lingling Xu; Ying Yang; Xinyu Zhang; Meichun Xiang; Chengshu Wang; Zhiqiang An; Xingzhong Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-19       Impact factor: 11.205

6.  Evolutionary Conservation and Diversification of Puf RNA Binding Proteins and Their mRNA Targets.

Authors:  Gregory J Hogan; Patrick O Brown; Daniel Herschlag
Journal:  PLoS Biol       Date:  2015-11-20       Impact factor: 8.029

7.  Comparative Analyses of Mitochondrial Genomes Provide Evolutionary Insights Into Nematode-Trapping Fungi.

Authors:  Ying Zhang; Guangzhu Yang; Meiling Fang; Chu Deng; Ke-Qin Zhang; Zefen Yu; Jianping Xu
Journal:  Front Microbiol       Date:  2020-04-15       Impact factor: 5.640

8.  PCR primers with enhanced specificity for nematode-trapping fungi (Orbiliales).

Authors:  Matthew E Smith; Bruce A Jaffee
Journal:  Microb Ecol       Date:  2008-10-18       Impact factor: 4.552

9.  Natural diversity in the predatory behavior facilitates the establishment of a robust model strain for nematode-trapping fungi.

Authors:  Ching-Ting Yang; Guillermo Vidal-Diez de Ulzurrun; A Pedro Gonçalves; Hung-Che Lin; Ching-Wen Chang; Tsung-Yu Huang; Sheng-An Chen; Cheng-Kuo Lai; Isheng J Tsai; Frank C Schroeder; Jason E Stajich; Yen-Ping Hsueh
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-11       Impact factor: 11.205

10.  Proteome of the nematode-trapping cells of the fungus Monacrosporium haptotylum.

Authors:  Karl-Magnus Andersson; Tejashwari Meerupati; Fredrik Levander; Eva Friman; Dag Ahrén; Anders Tunlid
Journal:  Appl Environ Microbiol       Date:  2013-06-14       Impact factor: 4.792

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