Literature DB >> 22711803

Theory of active transport in filopodia and stereocilia.

Pavel I Zhuravlev1, Yueheng Lan, Maria S Minakova, Garegin A Papoian.   

Abstract

The biological processes in elongated organelles of living cells are often regulated by molecular motor transport. We determined spatial distributions of motors in such organelles, corresponding to a basic scenario when motors only walk along the substrate, bind, unbind, and diffuse. We developed a mean-field model, which quantitatively reproduces elaborate stochastic simulation results as well as provides a physical interpretation of experimentally observed distributions of Myosin IIIa in stereocilia and filopodia. The mean-field model showed that the jamming of the walking motors is conspicuous, and therefore damps the active motor flux. However, when the motor distributions are coupled to the delivery of actin monomers toward the tip, even the concentration bump of G actin that they create before they jam is enough to speed up the diffusion to allow for severalfold longer filopodia. We found that the concentration profile of G actin along the filopodium is rather nontrivial, containing a narrow minimum near the base followed by a broad maximum. For efficient enough actin transport, this nonmonotonous shape is expected to occur under a broad set of conditions. We also find that the stationary motor distribution is universal for the given set of model parameters regardless of the organelle length, which follows from the form of the kinetic equations and the boundary conditions.

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Year:  2012        PMID: 22711803      PMCID: PMC3390872          DOI: 10.1073/pnas.1200160109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  29 in total

Review 1.  Extension of filopodia by motor-dependent actin assembly.

Authors:  M P Sheetz; D B Wayne; A L Pearlman
Journal:  Cell Motil Cytoskeleton       Date:  1992

2.  Protein fluxes along the filopodium as a framework for understanding the growth-retraction dynamics: the interplay between diffusion and active transport.

Authors:  Pavel I Zhuravlev; Garegin A Papoian
Journal:  Cell Adh Migr       Date:  2011 Sep-Oct       Impact factor: 3.405

3.  Adiabatic and non-adiabatic non-equilibrium stochastic dynamics of single regulating genes.

Authors:  Haidong Feng; Bo Han; Jin Wang
Journal:  J Phys Chem B       Date:  2010-12-28       Impact factor: 2.991

4.  A variational approach to the stochastic aspects of cellular signal transduction.

Authors:  Yueheng Lan; Peter G Wolynes; Garegin A Papoian
Journal:  J Chem Phys       Date:  2006-09-28       Impact factor: 3.488

5.  Dynamical control of the shape and size of stereocilia and microvilli.

Authors:  Jacques Prost; Camilla Barbetta; Jean-François Joanny
Journal:  Biophys J       Date:  2007-05-25       Impact factor: 4.033

Review 6.  Dynamic length regulation of sensory stereocilia.

Authors:  Uri Manor; Bechara Kachar
Journal:  Semin Cell Dev Biol       Date:  2008-07-25       Impact factor: 7.727

7.  On the spontaneous collective motion of active matter.

Authors:  Shenshen Wang; Peter G Wolynes
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-29       Impact factor: 11.205

8.  Regulation of stereocilia length by myosin XVa and whirlin depends on the actin-regulatory protein Eps8.

Authors:  Uri Manor; Andrea Disanza; M'Hamed Grati; Leonardo Andrade; Harrison Lin; Pier Paolo Di Fiore; Giorgio Scita; Bechara Kachar
Journal:  Curr Biol       Date:  2011-01-13       Impact factor: 10.834

9.  A comparison of deterministic and stochastic simulations of neuronal vesicle release models.

Authors:  Charin Modchang; Suhita Nadkarni; Thomas M Bartol; Wannapong Triampo; Terrence J Sejnowski; Herbert Levine; Wouter-Jan Rappel
Journal:  Phys Biol       Date:  2010-05-26       Impact factor: 2.583

10.  Dynamics of thin filopodia during sea urchin gastrulation.

Authors:  J Miller; S E Fraser; D McClay
Journal:  Development       Date:  1995-08       Impact factor: 6.868

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  16 in total

1.  Active cargo positioning in antiparallel transport networks.

Authors:  Mathieu Richard; Carles Blanch-Mercader; Hajer Ennomani; Wenxiang Cao; Enrique M De La Cruz; Jean-François Joanny; Frank Jülicher; Laurent Blanchoin; Pascal Martin
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-09       Impact factor: 11.205

2.  Speed and Diffusion of Kinesin-2 Are Competing Limiting Factors in Flagellar Length-Control Model.

Authors:  Rui Ma; Nathan L Hendel; Wallace F Marshall; Hongmin Qin
Journal:  Biophys J       Date:  2020-04-22       Impact factor: 4.033

3.  Physical model for the geometry of actin-based cellular protrusions.

Authors:  G Orly; M Naoz; N S Gov
Journal:  Biophys J       Date:  2014-08-05       Impact factor: 4.033

4.  Force Production by a Bundle of Growing Actin Filaments Is Limited by Its Mechanical Properties.

Authors:  Jean-Louis Martiel; Alphée Michelot; Rajaa Boujemaa-Paterski; Laurent Blanchoin; Julien Berro
Journal:  Biophys J       Date:  2019-11-06       Impact factor: 4.033

5.  How the formation of amyloid plaques and neurofibrillary tangles may be related: a mathematical modelling study.

Authors:  I A Kuznetsov; A V Kuznetsov
Journal:  Proc Math Phys Eng Sci       Date:  2018-02-07       Impact factor: 2.704

6.  Dynamic motions of molecular motors in the actin cytoskeleton.

Authors:  Wonyeong Jung; A Pasha Tabatabai; Jacob J Thomas; S M Ali Tabei; Michael P Murrell; Taeyoon Kim
Journal:  Cytoskeleton (Hoboken)       Date:  2019-12-09

7.  A Biophysical Model for the Staircase Geometry of Stereocilia.

Authors:  Gilad Orly; Uri Manor; Nir S Gov
Journal:  PLoS One       Date:  2015-07-24       Impact factor: 3.240

8.  Geometrical and mechanical properties control actin filament organization.

Authors:  Gaëlle Letort; Antonio Z Politi; Hajer Ennomani; Manuel Théry; Francois Nedelec; Laurent Blanchoin
Journal:  PLoS Comput Biol       Date:  2015-05-27       Impact factor: 4.475

9.  Competition and compensation: dissecting the biophysical and functional differences between the class 3 myosin paralogs, myosins 3a and 3b.

Authors:  Uri Manor; M'hamed Grati; Christopher M Yengo; Bechara Kachar; Nir S Gov
Journal:  Bioarchitecture       Date:  2012-09-01

10.  MEDYAN: Mechanochemical Simulations of Contraction and Polarity Alignment in Actomyosin Networks.

Authors:  Konstantin Popov; James Komianos; Garegin A Papoian
Journal:  PLoS Comput Biol       Date:  2016-04-27       Impact factor: 4.475

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