Literature DB >> 21975554

Protein fluxes along the filopodium as a framework for understanding the growth-retraction dynamics: the interplay between diffusion and active transport.

Pavel I Zhuravlev1, Garegin A Papoian.   

Abstract

We present a picture of filopodial growth and retraction from physics perspective, where we emphasize the significance of the role played by protein fluxes due to spatially extended nature of the filopodium. We review a series of works, which used stochastic simulations and mean field analytical modeling to find the concentration profile of G-actin inside a filopodium, which, in turn, determines the stationary filopodial length. In addition to extensively reviewing the prior works, we also report some new results on the role of active transport in regulating the length of filopodia. We model a filopodium where delivery of actin monomers towards the tip can occur both through passive diffusion and active transport by myosin motors. We found that the concentration profile of G-actin along the filopodium is rather non-trivial, containing a narrow minimum near the base followed by a broad maximum. For efficient enough actin transport, this non-monotonous shape is expected to occur under a broad set of conditions. We also raise the issue of slow approach to the stationary length and the possibility of multiple steady state solutions.

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Year:  2011        PMID: 21975554      PMCID: PMC3218612          DOI: 10.4161/cam.5.5.17868

Source DB:  PubMed          Journal:  Cell Adh Migr        ISSN: 1933-6918            Impact factor:   3.405


  59 in total

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4.  Formin is a processive motor that requires profilin to accelerate actin assembly and associated ATP hydrolysis.

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Review 5.  The making of filopodia.

Authors:  Jan Faix; Klemens Rottner
Journal:  Curr Opin Cell Biol       Date:  2005-12-06       Impact factor: 8.382

6.  Absolute rate theories of epigenetic stability.

Authors:  Aleksandra M Walczak; José N Onuchic; Peter G Wolynes
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-16       Impact factor: 11.205

7.  A variational approach to the stochastic aspects of cellular signal transduction.

Authors:  Yueheng Lan; Peter G Wolynes; Garegin A Papoian
Journal:  J Chem Phys       Date:  2006-09-28       Impact factor: 3.488

8.  Limits of filopodium stability.

Authors:  Sander Pronk; Phillip L Geissler; Daniel A Fletcher
Journal:  Phys Rev Lett       Date:  2008-06-23       Impact factor: 9.161

9.  Dynamics of thin filopodia during sea urchin gastrulation.

Authors:  J Miller; S E Fraser; D McClay
Journal:  Development       Date:  1995-08       Impact factor: 6.868

10.  F- and G-actin concentrations in lamellipodia of moving cells.

Authors:  Stefan A Koestler; Klemens Rottner; Frank Lai; Jennifer Block; Marlene Vinzenz; J Victor Small
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View more
  5 in total

1.  Membrane tension, myosin force, and actin turnover maintain actin treadmill in the nerve growth cone.

Authors:  Erin M Craig; David Van Goor; Paul Forscher; Alex Mogilner
Journal:  Biophys J       Date:  2012-04-03       Impact factor: 4.033

2.  Theory of active transport in filopodia and stereocilia.

Authors:  Pavel I Zhuravlev; Yueheng Lan; Maria S Minakova; Garegin A Papoian
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-18       Impact factor: 11.205

3.  Steric Effects Induce Geometric Remodeling of Actin Bundles in Filopodia.

Authors:  Ulrich Dobramysl; Garegin A Papoian; Radek Erban
Journal:  Biophys J       Date:  2016-05-10       Impact factor: 4.033

4.  Remarkable structural transformations of actin bundles are driven by their initial polarity, motor activity, crosslinking, and filament treadmilling.

Authors:  Aravind Chandrasekaran; Arpita Upadhyaya; Garegin A Papoian
Journal:  PLoS Comput Biol       Date:  2019-07-09       Impact factor: 4.475

5.  MEDYAN: Mechanochemical Simulations of Contraction and Polarity Alignment in Actomyosin Networks.

Authors:  Konstantin Popov; James Komianos; Garegin A Papoian
Journal:  PLoS Comput Biol       Date:  2016-04-27       Impact factor: 4.475

  5 in total

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