Literature DB >> 21876141

On the spontaneous collective motion of active matter.

Shenshen Wang1, Peter G Wolynes.   

Abstract

Spontaneous directed motion, a hallmark of cell biology, is unusual in classical statistical physics. Here we study, using both numerical and analytical methods, organized motion in models of the cytoskeleton in which constituents are driven by energy-consuming motors. Although systems driven by small-step motors are described by an effective temperature and are thus quiescent, at higher order in step size, both homogeneous and inhomogeneous, flowing and oscillating behavior emerges. Motors that respond with a negative susceptibility to imposed forces lead to an apparent negative-temperature system in which beautiful structures form resembling the asters seen in cell division.

Mesh:

Year:  2011        PMID: 21876141      PMCID: PMC3174585          DOI: 10.1073/pnas.1112034108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  20 in total

1.  Stability and dynamics of crystals and glasses of motorized particles.

Authors:  Tongye Shen; Peter G Wolynes
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-01       Impact factor: 11.205

2.  In and out of equilibrium.

Authors:  J Kurchan
Journal:  Nature       Date:  2005-01-20       Impact factor: 49.962

3.  Nonequilibrium statistical mechanical models for cytoskeletal assembly: towards understanding tensegrity in cells.

Authors:  Tongye Shen; Peter G Wolynes
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2005-10-26

4.  Intrinsic rates and activation free energies from single-molecule pulling experiments.

Authors:  Olga K Dudko; Gerhard Hummer; Attila Szabo
Journal:  Phys Rev Lett       Date:  2006-03-15       Impact factor: 9.161

5.  Spindle oscillations during asymmetric cell division require a threshold number of active cortical force generators.

Authors:  Jacques Pecreaux; Jens-Christian Röper; Karsten Kruse; Frank Jülicher; Anthony A Hyman; Stephan W Grill; Jonathon Howard
Journal:  Curr Biol       Date:  2006-11-07       Impact factor: 10.834

6.  Generic phase diagram of active polar films.

Authors:  R Voituriez; J F Joanny; J Prost
Journal:  Phys Rev Lett       Date:  2006-01-17       Impact factor: 9.161

7.  Potential landscape and flux framework of nonequilibrium networks: robustness, dissipation, and coherence of biochemical oscillations.

Authors:  Jin Wang; Li Xu; Erkang Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-21       Impact factor: 11.205

8.  Hydrodynamics of cellular cortical flows and the formation of contractile rings.

Authors:  G Salbreux; J Prost; J F Joanny
Journal:  Phys Rev Lett       Date:  2009-07-31       Impact factor: 9.161

9.  Pattern formation in active fluids.

Authors:  Justin S Bois; Frank Jülicher; Stephan W Grill
Journal:  Phys Rev Lett       Date:  2011-01-13       Impact factor: 9.161

10.  Spontaneous oscillation by hair bundles of the bullfrog's sacculus.

Authors:  Pascal Martin; D Bozovic; Y Choe; A J Hudspeth
Journal:  J Neurosci       Date:  2003-06-01       Impact factor: 6.167

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  14 in total

1.  Active contractility in actomyosin networks.

Authors:  Shenshen Wang; Peter G Wolynes
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-09       Impact factor: 11.205

2.  Theory of active transport in filopodia and stereocilia.

Authors:  Pavel I Zhuravlev; Yueheng Lan; Maria S Minakova; Garegin A Papoian
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-18       Impact factor: 11.205

Review 3.  Genomic Energy Landscapes.

Authors:  Bin Zhang; Peter G Wolynes
Journal:  Biophys J       Date:  2016-09-30       Impact factor: 4.033

Review 4.  Frustration in biomolecules.

Authors:  Diego U Ferreiro; Elizabeth A Komives; Peter G Wolynes
Journal:  Q Rev Biophys       Date:  2014-09-16       Impact factor: 5.318

5.  Effective temperature concept evaluated in an active colloid mixture.

Authors:  Ming Han; Jing Yan; Steve Granick; Erik Luijten
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-03       Impact factor: 11.205

Review 6.  Glass-like dynamics in the cell and in cellular collectives.

Authors:  Monirosadat Sadati; Amir Nourhani; Jeffrey J Fredberg; Nader Taheri Qazvini
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2014-01-15

Review 7.  Collective dynamics of processive cytoskeletal motors.

Authors:  R Tyler McLaughlin; Michael R Diehl; Anatoly B Kolomeisky
Journal:  Soft Matter       Date:  2016-01-07       Impact factor: 3.679

8.  Glassy dynamics, cell mechanics, and endothelial permeability.

Authors:  Corey Hardin; Kavitha Rajendran; Greeshma Manomohan; Dhananjay T Tambe; James P Butler; Jeffrey J Fredberg; Roberta Martinelli; Christopher V Carman; Ramaswamy Krishnan
Journal:  J Phys Chem B       Date:  2013-05-30       Impact factor: 2.991

9.  Comparison of explicit and mean-field models of cytoskeletal filaments with crosslinking motors.

Authors:  Adam R Lamson; Jeffrey M Moore; Fang Fang; Matthew A Glaser; Michael J Shelley; Meredith D Betterton
Journal:  Eur Phys J E Soft Matter       Date:  2021-03-29       Impact factor: 1.890

10.  Detecting repetitions and periodicities in proteins by tiling the structural space.

Authors:  R Gonzalo Parra; Rocío Espada; Ignacio E Sánchez; Manfred J Sippl; Diego U Ferreiro
Journal:  J Phys Chem B       Date:  2013-07-05       Impact factor: 2.991

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