Literature DB >> 22710399

Basic Caenorhabditis elegans methods: synchronization and observation.

Montserrat Porta-de-la-Riva1, Laura Fontrodona, Alberto Villanueva, Julián Cerón.   

Abstract

Research into the molecular and developmental biology of the nematode Caenorhabditis elegans was begun in the early seventies by Sydney Brenner and it has since been used extensively as a model organism. C. elegans possesses key attributes such as simplicity, transparency and short life cycle that have made it a suitable experimental system for fundamental biological studies for many years. Discoveries in this nematode have broad implications because many cellular and molecular processes that control animal development are evolutionary conserved. C. elegans life cycle goes through an embryonic stage and four larval stages before animals reach adulthood. Development can take 2 to 4 days depending on the temperature. In each of the stages several characteristic traits can be observed. The knowledge of its complete cell lineage together with the deep annotation of its genome turn this nematode into a great model in fields as diverse as the neurobiology, aging, stem cell biology and germ line biology. An additional feature that makes C. elegans an attractive model to work with is the possibility of obtaining populations of worms synchronized at a specific stage through a relatively easy protocol. The ease of maintaining and propagating this nematode added to the possibility of synchronization provide a powerful tool to obtain large amounts of worms, which can be used for a wide variety of small or high-throughput experiments such as RNAi screens, microarrays, massive sequencing, immunoblot or in situ hybridization, among others. Because of its transparency, C. elegans structures can be distinguished under the microscope using Differential Interference Contrast microscopy, also known as Nomarski microscopy. The use of a fluorescent DNA binder, DAPI (4',6-diamidino-2-phenylindole), for instance, can lead to the specific identification and localization of individual cells, as well as subcellular structures/defects associated to them.

Entities:  

Mesh:

Year:  2012        PMID: 22710399      PMCID: PMC3607348          DOI: 10.3791/4019

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  17 in total

Review 1.  Autophagy and longevity: lessons from C. elegans.

Authors:  Kailiang Jia; Beth Levine
Journal:  Adv Exp Med Biol       Date:  2010       Impact factor: 2.622

Review 2.  Maintenance of C. elegans.

Authors:  Theresa Stiernagle
Journal:  WormBook       Date:  2006-02-11

3.  Post-embryonic cell lineages of the nematode, Caenorhabditis elegans.

Authors:  J E Sulston; H R Horvitz
Journal:  Dev Biol       Date:  1977-03       Impact factor: 3.582

4.  The postembryonic cell lineages of the hermaphrodite and male gonads in Caenorhabditis elegans.

Authors:  J Kimble; D Hirsh
Journal:  Dev Biol       Date:  1979-06       Impact factor: 3.582

5.  Genetic analysis of Caenorhabditis elegans glp-1 mutants suggests receptor interaction or competition.

Authors:  Anita S-R Pepper; Darrell J Killian; E Jane Albert Hubbard
Journal:  Genetics       Date:  2003-01       Impact factor: 4.562

Review 6.  Caenorhabditis elegans as a model for stem cell biology.

Authors:  Pradeep M Joshi; Misty R Riddle; Nareg J V Djabrayan; Joel H Rothman
Journal:  Dev Dyn       Date:  2010-05       Impact factor: 3.780

7.  The mechanism of the paralysing action of tetramisole on Ascaris somatic muscle.

Authors:  J Aceves; D Erlij; R Martínez-Marañón
Journal:  Br J Pharmacol       Date:  1970-05       Impact factor: 8.739

8.  A redox-sensitive peroxiredoxin that is important for longevity has tissue- and stress-specific roles in stress resistance.

Authors:  Monika Oláhová; Sarah R Taylor; Siavash Khazaipoul; Jinling Wang; Brian A Morgan; Kunihiro Matsumoto; T Keith Blackwell; Elizabeth A Veal
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-08       Impact factor: 11.205

9.  Identification of potential therapeutic drugs for huntington's disease using Caenorhabditis elegans.

Authors:  Cindy Voisine; Hemant Varma; Nicola Walker; Emily A Bates; Brent R Stockwell; Anne C Hart
Journal:  PLoS One       Date:  2007-06-06       Impact factor: 3.240

10.  Age- and calorie-independent life span extension from dietary restriction by bacterial deprivation in Caenorhabditis elegans.

Authors:  Erica D Smith; Tammi L Kaeberlein; Brynn T Lydum; Jennifer Sager; K Linnea Welton; Brian K Kennedy; Matt Kaeberlein
Journal:  BMC Dev Biol       Date:  2008-05-05       Impact factor: 1.978

View more
  116 in total

1.  Swimming Induced Paralysis to Assess Dopamine Signaling in Caenorhabditis elegans.

Authors:  Sirisha Kudumala; Serena Sossi; Lucia Carvelli
Journal:  J Vis Exp       Date:  2019-04-03       Impact factor: 1.355

2.  Plate-based Large-scale Cultivation of Caenorhabditis elegans: Sample Preparation for the Study of Metabolic Alterations in Diabetes.

Authors:  Katharina Kohl; Thomas Fleming; Kübra Acunman; Hans-Peter Hammes; Michael Morcos; Andrea Schlotterer
Journal:  J Vis Exp       Date:  2018-08-24       Impact factor: 1.355

3.  Ordering Single Cells and Single Embryos in 3D Confinement: A New Device for High Content Screening.

Authors:  Viktoria Wollrab; David Caballero; Raghavan Thiagarajan; Daniel Riveline
Journal:  J Vis Exp       Date:  2016-09-18       Impact factor: 1.355

4.  Observation and Quantification of Telomere and Repetitive Sequences Using Fluorescence In Situ Hybridization (FISH) with PNA Probes in Caenorhabditis elegans.

Authors:  Beomseok Seo; Junho Lee
Journal:  J Vis Exp       Date:  2016-08-04       Impact factor: 1.355

5.  In Situ Detection of Ribonucleoprotein Complex Assembly in the C. elegans Germline using Proximity Ligation Assay.

Authors:  Nicholas J Day; Xiaobo Wang; Ekaterina Voronina
Journal:  J Vis Exp       Date:  2020-05-05       Impact factor: 1.355

6.  NHJ-1 Is Required for Canonical Nonhomologous End Joining in Caenorhabditis elegans.

Authors:  Aleksandar Vujin; Steven J Jones; Monique Zetka
Journal:  Genetics       Date:  2020-05-26       Impact factor: 4.562

7.  Loss of the proteostasis factor AIRAPL causes myeloid transformation by deregulating IGF-1 signaling.

Authors:  Fernando G Osorio; Clara Soria-Valles; Olaya Santiago-Fernández; Teresa Bernal; María Mittelbrunn; Enrique Colado; Francisco Rodríguez; Elena Bonzon-Kulichenko; Jesús Vázquez; Montserrat Porta-de-la-Riva; Julián Cerón; Antonio Fueyo; Juan Li; Anthony R Green; José M P Freije; Carlos López-Otín
Journal:  Nat Med       Date:  2015-12-21       Impact factor: 53.440

8.  Caenorhabditis elegans: An important tool for dissecting microRNA functions.

Authors:  Ziwen Zhu; Duo Zhang; Heedoo Lee; Yang Jin
Journal:  Biomed Genet Genom       Date:  2016-07-25

9.  Using a Microfluidics Device for Mechanical Stimulation and High Resolution Imaging of C. elegans.

Authors:  Holger Fehlauer; Adam L Nekimken; Anna A Kim; Beth L Pruitt; Miriam B Goodman; Michael Krieg
Journal:  J Vis Exp       Date:  2018-02-19       Impact factor: 1.355

10.  High-speed label-free confocal microscopy of Caenorhabditis elegans with near infrared spectrally encoded confocal microscopy.

Authors:  Sadaf Rashtchian; Khaled Youssef; Pouya Rezai; Nima Tabatabaei
Journal:  Biomed Opt Express       Date:  2021-05-25       Impact factor: 3.732

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.