Literature DB >> 24027622

3D Prostate Segmentation of Ultrasound Images Combining Longitudinal Image Registration and Machine Learning.

Xiaofeng Yang1, Baowei Fei.   

Abstract

We developed a three-dimensional (3D) segmentation method for transrectal ultrasound (TRUS) images, which is based on longitudinal image registration and machine learning. Using longitudinal images of each individual patient, we register previously acquired images to the new images of the same subject. Three orthogonal Gabor filter banks were used to extract texture features from each registered image. Patient-specific Gabor features from the registered images are used to train kernel support vector machines (KSVMs) and then to segment the newly acquired prostate image. The segmentation method was tested in TRUS data from five patients. The average surface distance between our and manual segmentation is 1.18 ± 0.31 mm, indicating that our automatic segmentation method based on longitudinal image registration is feasible for segmenting the prostate in TRUS images.

Entities:  

Keywords:  Transrectal ultrasound (TRUS); image registration; image segmentation; machine learning; prostate cancer; support vector machine (SVM)

Year:  2012        PMID: 24027622      PMCID: PMC3767004          DOI: 10.1117/12.912188

Source DB:  PubMed          Journal:  Proc SPIE Int Soc Opt Eng        ISSN: 0277-786X


  40 in total

1.  A three-dimensional deformable model for segmentation of human prostate from ultrasound images.

Authors:  A Ghanei; H Soltanian-Zadeh; A Ratkewicz; F F Yin
Journal:  Med Phys       Date:  2001-10       Impact factor: 4.071

2.  Prostate boundary segmentation from 2D ultrasound images.

Authors:  H M Ladak; F Mao; Y Wang; D B Downey; D A Steinman; A Fenster
Journal:  Med Phys       Date:  2000-08       Impact factor: 4.071

3.  Automatic 3D registration for interventional MRI-guided treatment of prostate cancer.

Authors:  Baowei Fei; Jeffrey L Duerk; David L Wilson
Journal:  Comput Aided Surg       Date:  2002

4.  Slice-to-volume registration and its potential application to interventional MRI-guided radio-frequency thermal ablation of prostate cancer.

Authors:  Baowei Fei; Jeffrey L Duerk; Daniel T Boll; Jonathan S Lewin; David L Wilson
Journal:  IEEE Trans Med Imaging       Date:  2003-04       Impact factor: 10.048

5.  Segmentation of prostate boundaries from ultrasound images using statistical shape model.

Authors:  Dinggang Shen; Yiqiang Zhan; Christos Davatzikos
Journal:  IEEE Trans Med Imaging       Date:  2003-04       Impact factor: 10.048

6.  Combined 18F-FDG and 11C-methionine PET scans in patients with newly progressive metastatic prostate cancer.

Authors:  Rodolfo Nuñez; Homer A Macapinlac; Henry W D Yeung; Tim Akhurst; Shangde Cai; Iman Osman; Mithat Gonen; Elyn Riedel; Howard I Scher; Steven M Larson
Journal:  J Nucl Med       Date:  2002-01       Impact factor: 10.057

7.  Synthesis and evaluation of 18F-labeled choline as an oncologic tracer for positron emission tomography: initial findings in prostate cancer.

Authors:  T R DeGrado; R E Coleman; S Wang; S W Baldwin; M D Orr; C N Robertson; T J Polascik; D T Price
Journal:  Cancer Res       Date:  2001-01-01       Impact factor: 12.701

8.  Edge-guided boundary delineation in prostate ultrasound images.

Authors:  S D Pathak; V Chalana; D R Haynor; Y Kim
Journal:  IEEE Trans Med Imaging       Date:  2000-12       Impact factor: 10.048

9.  11C-acetate PET imaging of prostate cancer.

Authors:  Nobuyuki Oyama; Hironobu Akino; Hiroshi Kanamaru; Yuji Suzuki; Satoshi Muramoto; Yoshiharu Yonekura; Norihiro Sadato; Kazutaka Yamamoto; Kenichiro Okada
Journal:  J Nucl Med       Date:  2002-02       Impact factor: 10.057

10.  Parametric shape modeling using deformable superellipses for prostate segmentation.

Authors:  Lixin Gong; Sayan D Pathak; David R Haynor; Paul S Cho; Yongmin Kim
Journal:  IEEE Trans Med Imaging       Date:  2004-03       Impact factor: 10.048

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  12 in total

1.  Automatic Segmentation of Right Ventricle on Ultrasound Images Using Sparse Matrix Transform and Level Set.

Authors:  Xulei Qin; Zhibin Cong; Luma V Halig; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2013-03-13

2.  Prostate CT segmentation method based on nonrigid registration in ultrasound-guided CT-based HDR prostate brachytherapy.

Authors:  Xiaofeng Yang; Peter Rossi; Tomi Ogunleye; David M Marcus; Ashesh B Jani; Hui Mao; Walter J Curran; Tian Liu
Journal:  Med Phys       Date:  2014-11       Impact factor: 4.071

3.  A New CT Prostate Segmentation for CT-Based HDR Brachytherapy.

Authors:  Xiaofeng Yang; Peter Rossi; Tomi Ogunleye; Ashesh B Jani; Walter J Curran; Tian Liu
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2014

4.  Accuracy Evaluation of a 3D Ultrasound-guided Biopsy System.

Authors:  Walter J Wooten; Jonathan A Nye; David M Schuster; Peter T Nieh; Viraj A Master; John R Votaw; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2013-03-14

Review 5.  Machine learning for medical ultrasound: status, methods, and future opportunities.

Authors:  Laura J Brattain; Brian A Telfer; Manish Dhyani; Joseph R Grajo; Anthony E Samir
Journal:  Abdom Radiol (NY)       Date:  2018-04

6.  Ultrasound prostate segmentation based on multidirectional deeply supervised V-Net.

Authors:  Yang Lei; Sibo Tian; Xiuxiu He; Tonghe Wang; Bo Wang; Pretesh Patel; Ashesh B Jani; Hui Mao; Walter J Curran; Tian Liu; Xiaofeng Yang
Journal:  Med Phys       Date:  2019-05-29       Impact factor: 4.071

7.  Combining Population and Patient-Specific Characteristics for Prostate Segmentation on 3D CT Images.

Authors:  Ling Ma; Rongrong Guo; Zhiqiang Tian; Rajesh Venkataraman; Saradwata Sarkar; Xiabi Liu; Funmilayo Tade; David M Schuster; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2016-03-21

8.  Random Walk Based Segmentation for the Prostate on 3D Transrectal Ultrasound Images.

Authors:  Ling Ma; Rongrong Guo; Zhiqiang Tian; Rajesh Venkataraman; Saradwata Sarkar; Xiabi Liu; Peter T Nieh; Viraj V Master; David M Schuster; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2016-03-18

9.  Multi-atlas-based Segmentation of the Parotid Glands of MR Images in Patients Following Head-and-neck Cancer Radiotherapy.

Authors:  Guanghui Cheng; Xiaofeng Yang; Ning Wu; Zhijian Xu; Hongfu Zhao; Yuefeng Wang; Tian Liu
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2013-02-28

10.  Deeply supervised 3D fully convolutional networks with group dilated convolution for automatic MRI prostate segmentation.

Authors:  Bo Wang; Yang Lei; Sibo Tian; Tonghe Wang; Yingzi Liu; Pretesh Patel; Ashesh B Jani; Hui Mao; Walter J Curran; Tian Liu; Xiaofeng Yang
Journal:  Med Phys       Date:  2019-02-19       Impact factor: 4.071

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