Literature DB >> 22706046

Microsatellite markers for characterization of native and introduced populations of Plasmopara viticola, the causal agent of grapevine downy mildew.

Mélanie Rouxel1, Daciana Papura, Marilise Nogueira, Virginie Machefer, Damien Dezette, Sylvie Richard-Cervera, Sébastien Carrere, Pere Mestre, François Delmotte.   

Abstract

We reported 31 microsatellite markers that have been developed from microsatellite-enriched and direct shotgun pyrosequencing libraries of Plasmopara viticola, the causal agent of grapevine downy mildew. These markers were optimized for population genetics applications and used to characterize 96 P. viticola isolates from three European and three North American populations.

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Year:  2012        PMID： 22706046      PMCID： PMC3416634          DOI： 10.1128/AEM.01255-12

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  9 in total

1.  Apparent heterozygote deficiencies observed in DNA typing data and their implications in forensic applications.

Authors:  R Chakraborty; M De Andrade; S P Daiger; B Budowle
Journal:  Ann Hum Genet       Date:  1992-01       Impact factor: 1.670

2.  Challenges of microsatellite isolation in fungi.

Authors:  Cyril Dutech; Jérome Enjalbert; Elisabeth Fournier; François Delmotte; Benoit Barrès; Jean Carlier; Didier Tharreau; Tatiana Giraud
Journal:  Fungal Genet Biol       Date:  2007-06-02       Impact factor: 3.495

3.  SciRoKo: a new tool for whole genome microsatellite search and investigation.

Authors:  Robert Kofler; Christian Schlötterer; Tamas Lelley
Journal:  Bioinformatics       Date:  2007-04-26       Impact factor: 6.937

4.  Fast, cost-effective development of species-specific microsatellite markers by genomic sequencing.

Authors:  Jawad Abdelkrim; Bruce Robertson; Jo-Ann Stanton; Neil Gemmell
Journal:  Biotechniques       Date:  2009-03       Impact factor: 1.993

5.  QDD: a user-friendly program to select microsatellite markers and design primers from large sequencing projects.

Authors:  Emese Meglécz; Caroline Costedoat; Vincent Dubut; André Gilles; Thibaut Malausa; Nicolas Pech; Jean-François Martin
Journal:  Bioinformatics       Date:  2009-12-10       Impact factor: 6.937

6.  High-throughput microsatellite isolation through 454 GS-FLX Titanium pyrosequencing of enriched DNA libraries.

Authors:  Thibaut Malausa; André Gilles; Emese Meglécz; Hélène Blanquart; Stéphanie Duthoy; Caroline Costedoat; Vincent Dubut; Nicolas Pech; Philippe Castagnone-Sereno; Christophe Délye; Nicolas Feau; Pascal Frey; Philippe Gauthier; Thomas Guillemaud; Laurent Hazard; Valérie Le Corre; Brigitte Lung-Escarmant; Pierre-Jean G Malé; Stéphanie Ferreira; Jean-François Martin
Journal:  Mol Ecol Resour       Date:  2011-02-21       Impact factor: 7.090

7.  Characterization of single-nucleotide-polymorphism markers for Plasmopara viticola, the causal agent of grapevine downy mildew.

Authors:  F Delmotte; V Machefer; X Giresse; S Richard-Cervera; M P Latorse; R Beffa
Journal:  Appl Environ Microbiol       Date:  2011-09-16       Impact factor: 4.792

8.  At least two origins of fungicide resistance in grapevine downy mildew populations.

Authors:  Wei-Jen Chen; François Delmotte; Sylvie Richard-Cervera; Lisette Douence; Charles Greif; Marie-France Corio-Costet
Journal:  Appl Environ Microbiol       Date:  2007-06-22       Impact factor: 4.792

9.  Comparison of random and SSR-enriched shotgun pyrosequencing for microsatellite discovery and single multiplex PCR optimization in Acacia harpophylla F. Muell. Ex Benth.

Authors:  Olivier Lepais; Cecile F E Bacles
Journal:  Mol Ecol Resour       Date:  2011-03-16       Impact factor: 7.090
  9 in total
  2 in total

1.  Adaptation of a plant pathogen to partial host resistance: selection for greater aggressiveness in grapevine downy mildew.

Authors:  Chloé E L Delmas; Frédéric Fabre; Jérôme Jolivet; Isabelle D Mazet; Sylvie Richart Cervera; Laurent Delière; François Delmotte
Journal:  Evol Appl       Date:  2016-02-24       Impact factor: 5.183

Review 2.  Fantastic Downy Mildew Pathogens and How to Find Them: Advances in Detection and Diagnostics.

Authors:  Andres F Salcedo; Savithri Purayannur; Jeffrey R Standish; Timothy Miles; Lindsey Thiessen; Lina M Quesada-Ocampo
Journal:  Plants (Basel)       Date:  2021-02-25
  2 in total

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