Literature DB >> 33668762

Fantastic Downy Mildew Pathogens and How to Find Them: Advances in Detection and Diagnostics.

Andres F Salcedo1, Savithri Purayannur1, Jeffrey R Standish1, Timothy Miles2, Lindsey Thiessen1, Lina M Quesada-Ocampo1.   

Abstract

Downy mildews affect important crops and cause severe losses in production worldwide. Accurate identification and monitoring of these plant pathogens, especially at early stages of the disease, is fundamental in achieving effective disease control. The rapid development of molecular methods for diagnosis has provided more specific, fast, reliable, sensitive, and portable alternatives for plant pathogen detection and quantification than traditional approaches. In this review, we provide information on the use of molecular markers, serological techniques, and nucleic acid amplification technologies for downy mildew diagnosis, highlighting the benefits and disadvantages of the technologies and target selection. We emphasize the importance of incorporating information on pathogen variability in virulence and fungicide resistance for disease management and how the development and application of diagnostic assays based on standard and promising technologies, including high-throughput sequencing and genomics, are revolutionizing the development of species-specific assays suitable for in-field diagnosis. Our review provides an overview of molecular detection technologies and a practical guide for selecting the best approaches for diagnosis.

Entities:  

Keywords:  downy mildews; molecular diagnostics; plant pathogens

Year:  2021        PMID: 33668762      PMCID: PMC7996204          DOI: 10.3390/plants10030435

Source DB:  PubMed          Journal:  Plants (Basel)        ISSN: 2223-7747


  125 in total

1.  Loop-mediated isothermal amplification of DNA.

Authors:  T Notomi; H Okayama; H Masubuchi; T Yonekawa; K Watanabe; N Amino; T Hase
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

2.  Phylogenetic relationships of Pythium and Phytophthora species based on ITS rDNA, cytochrome oxidase II and beta-tubulin gene sequences.

Authors:  Neilyn O Villa; Koji Kageyama; Takahiro Asano; Haruhisa Suga
Journal:  Mycologia       Date:  2006 May-Jun       Impact factor: 2.696

3.  Tolerance of loop-mediated isothermal amplification to a culture medium and biological substances.

Authors:  Hisatoshi Kaneko; Takashi Kawana; Eiko Fukushima; Tatsuo Suzutani
Journal:  J Biochem Biophys Methods       Date:  2006-08-30

Review 4.  Advances in Diagnostics of Downy Mildews: Lessons Learned from Other Oomycetes and Future Challenges.

Authors:  Sharifa G Crandall; Alamgir Rahman; Lina M Quesada-Ocampo; Frank N Martin; Guillaume J Bilodeau; Timothy D Miles
Journal:  Plant Dis       Date:  2018-01-05       Impact factor: 4.438

Review 5.  Basil Downy Mildew (Peronospora belbahrii): Discoveries and Challenges Relative to Its Control.

Authors:  Christian A Wyenandt; James E Simon; Robert M Pyne; Kathryn Homa; Margaret T McGrath; Shouan Zhang; Richard N Raid; Li-Jun Ma; Robert Wick; Li Guo; Angela Madeiras
Journal:  Phytopathology       Date:  2015-07-09       Impact factor: 4.025

6.  Albugo candida race diversity, ploidy and host-associated microbes revealed using DNA sequence capture on diseased plants in the field.

Authors:  Agathe Jouet; Diane G O Saunders; Mark McMullan; Ben Ward; Oliver Furzer; Florian Jupe; Volkan Cevik; Ingo Hein; Gaetan J A Thilliez; Eric Holub; Cock van Oosterhout; Jonathan D G Jones
Journal:  New Phytol       Date:  2018-10-05       Impact factor: 10.151

7.  A multi-locus phylogeny for Phytophthora utilizing markers derived from complete genome sequences.

Authors:  Jaime E Blair; Michael D Coffey; Sook-Young Park; David M Geiser; Seogchan Kang
Journal:  Fungal Genet Biol       Date:  2007-10-23       Impact factor: 3.495

8.  Metalaxyl Resistance in Phytophthora infestans: Assessing Role of RPA190 Gene and Diversity Within Clonal Lineages.

Authors:  Michael E H Matson; Ian M Small; William E Fry; Howard S Judelson
Journal:  Phytopathology       Date:  2015-11-09       Impact factor: 4.025

Review 9.  CRISPR-Based Diagnosis of Infectious and Noninfectious Diseases.

Authors:  Somayeh Jolany Vangah; Camellia Katalani; Hannah A Booneh; Abbas Hajizade; Adna Sijercic; Gholamreza Ahmadian
Journal:  Biol Proced Online       Date:  2020-09-14       Impact factor: 3.244

10.  Pathogen enrichment sequencing (PenSeq) enables population genomic studies in oomycetes.

Authors:  Gaetan J A Thilliez; Miles R Armstrong; Tze-Yin Lim; Katie Baker; Agathe Jouet; Ben Ward; Cock van Oosterhout; Jonathan D G Jones; Edgar Huitema; Paul R J Birch; Ingo Hein
Journal:  New Phytol       Date:  2018-10-05       Impact factor: 10.151

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.