Literature DB >> 22694982

Improved methods to identify stable, highly heritable subtypes of opioid use and related behaviors.

Jiangwen Sun1, Jinbo Bi, Grace Chan, David Oslin, Lindsay Farrer, Joel Gelernter, Henry R Kranzler.   

Abstract

Although there is evidence that opioid dependence (OD) is heritable, efforts to identify genes contributing to risk for the disorder have been hampered by its complex etiology and variable clinical manifestations. Decomposition of a complex set of opioid users into homogeneous subgroups could enhance genetic analysis. We applied a series of data mining techniques, including multiple correspondence analysis, variable selection and cluster analysis, to 69 opioid-related measures from 5390 subjects aggregated from family-based and case-control genetic studies to identify homogeneous subtypes and estimate their heritability. Novel aspects of this work include our use of (1) heritability estimates of specific clinical features of OD to enhance the heritability of the subtypes and (2) a k-medoids clustering method in combination with hierarchical clustering to yield replicable clusters that are less sensitive to noise than previous methods. We identified five homogeneous groups, including two large groups comprised of 762 and 1353 heavy opioid users, with estimated heritability of 0.69 and 0.76, respectively. These methods represent a promising approach to the identification of highly heritable subtypes in complex, heterogeneous disorders. Published by Elsevier Ltd.

Entities:  

Mesh:

Year:  2012        PMID: 22694982      PMCID: PMC3395719          DOI: 10.1016/j.addbeh.2012.05.010

Source DB:  PubMed          Journal:  Addict Behav        ISSN: 0306-4603            Impact factor:   3.913


  18 in total

1.  Specificity of genetic and environmental risk factors for use and abuse/dependence of cannabis, cocaine, hallucinogens, sedatives, stimulants, and opiates in male twins.

Authors:  Kenneth S Kendler; Kristen C Jacobson; Carol A Prescott; Michael C Neale
Journal:  Am J Psychiatry       Date:  2003-04       Impact factor: 18.112

2.  Typologies of drug dependence: comparative validity of a multivariate and four univariate models.

Authors:  Debasish Basu; Samuel A Ball; Richard Feinn; Joel Gelernter; Henry R Kranzler
Journal:  Drug Alcohol Depend       Date:  2004-03-08       Impact factor: 4.492

3.  Genomewide linkage scan for opioid dependence and related traits.

Authors:  Joel Gelernter; Carolien Panhuysen; Marsha Wilcox; Victor Hesselbrock; Bruce Rounsaville; James Poling; Roger Weiss; Susan Sonne; Hongyu Zhao; Lindsay Farrer; Henry R Kranzler
Journal:  Am J Hum Genet       Date:  2006-03-16       Impact factor: 11.025

4.  Subtypes of alcohol dependence in a nationally representative sample.

Authors:  Howard B Moss; Chiung M Chen; Hsiao-ye Yi
Journal:  Drug Alcohol Depend       Date:  2007-06-26       Impact factor: 4.492

5.  Diagnostic reliability of the Semi-structured Assessment for Drug Dependence and Alcoholism (SSADDA).

Authors:  Amira Pierucci-Lagha; Joel Gelernter; Richard Feinn; Joseph F Cubells; Deborah Pearson; Alisha Pollastri; Lindsay Farrer; Henry R Kranzler
Journal:  Drug Alcohol Depend       Date:  2005-12-12       Impact factor: 4.492

6.  Empirically derived subtypes of opioid use and related behaviors.

Authors:  Grace Chan; Joel Gelernter; David Oslin; Lindsay Farrer; Henry R Kranzler
Journal:  Addiction       Date:  2011-04-28       Impact factor: 6.526

7.  A multi-site study of alcohol subtypes: classification and overlap of unidimensional and multi-dimensional typologies.

Authors:  Elizabeth E Epstein; Erich Labouvie; Barbara S McCrady; Noelle K Jensen; Jumi Hayaki
Journal:  Addiction       Date:  2002-08       Impact factor: 6.526

Review 8.  Challenges in phenotype definition in the whole-genome era: multivariate models of memory and intelligence.

Authors:  F W Sabb; A C Burggren; R G Higier; J Fox; J He; D S Parker; R A Poldrack; W Chu; T D Cannon; N B Freimer; R M Bilder
Journal:  Neuroscience       Date:  2009-05-18       Impact factor: 3.590

9.  The validity of cocaine dependence subtypes.

Authors:  Henry R Kranzler; Marsha Wilcox; Roger D Weiss; Kathleen Brady; Victor Hesselbrock; Bruce Rounsaville; Lindsay Farrer; Joel Gelernter
Journal:  Addict Behav       Date:  2007-05-24       Impact factor: 3.913

Review 10.  The genetics of alcohol and other drug dependence.

Authors:  Danielle M Dick; Arpana Agrawal
Journal:  Alcohol Res Health       Date:  2008
View more
  26 in total

1.  Characteristics and course of dependence in cocaine-dependent individuals who never used alcohol or marijuana or used cocaine first.

Authors:  Carolyn E Sartor; Henry R Kranzler; Joel Gelernter
Journal:  J Stud Alcohol Drugs       Date:  2014-05       Impact factor: 2.582

2.  Characterization of DSM-IV Opioid Dependence Among Individuals of European Ancestry.

Authors:  Leslie A Brick; Lauren Micalizzi; Valerie S Knopik; Rohan H C Palmer
Journal:  J Stud Alcohol Drugs       Date:  2019-05       Impact factor: 2.582

3.  Psychometric modeling of abuse and dependence symptoms across six illicit substances indicates novel dimensions of misuse.

Authors:  Shaunna L Clark; Nathan A Gillespie; Daniel E Adkins; Kenneth S Kendler; Michael C Neale
Journal:  Addict Behav       Date:  2015-10-17       Impact factor: 3.913

4.  Comparing the utility of homogeneous subtypes of cocaine use and related behaviors with DSM-IV cocaine dependence as traits for genetic association analysis.

Authors:  Jinbo Bi; Joel Gelernter; Jiangwen Sun; Henry R Kranzler
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2013-12-11       Impact factor: 3.568

Review 5.  Alcohol Dependence Genetics: Lessons Learned From Genome-Wide Association Studies (GWAS) and Post-GWAS Analyses.

Authors:  Amy B Hart; Henry R Kranzler
Journal:  Alcohol Clin Exp Res       Date:  2015-06-25       Impact factor: 3.455

6.  Collaborative Phenotype Inference from Comorbid Substance Use Disorders and Genotypes.

Authors:  Jin Lu; Jiangwen Sun; Xinyu Wang; Henry R Kranzler; Joel Gelernter; Jinbo Bi
Journal:  Proceedings (IEEE Int Conf Bioinformatics Biomed)       Date:  2017-12-18

7.  Multiview comodeling to improve subtyping and genetic association of complex diseases.

Authors:  Jiangwen Sun; Jinbo Bi; Henry R Kranzler
Journal:  IEEE J Biomed Health Inform       Date:  2014-03       Impact factor: 5.772

8.  Rate of progression from first use to dependence on cocaine or opioids: a cross-substance examination of associated demographic, psychiatric, and childhood risk factors.

Authors:  Carolyn E Sartor; Henry R Kranzler; Joel Gelernter
Journal:  Addict Behav       Date:  2013-10-18       Impact factor: 3.913

Review 9.  Personalized medicine and opioid analgesic prescribing for chronic pain: opportunities and challenges.

Authors:  Stephen Bruehl; A Vania Apkarian; Jane C Ballantyne; Ann Berger; David Borsook; Wen G Chen; John T Farrar; Jennifer A Haythornthwaite; Susan D Horn; Michael J Iadarola; Charles E Inturrisi; Lixing Lao; Sean Mackey; Jianren Mao; Andrea Sawczuk; George R Uhl; James Witter; Clifford J Woolf; Jon-Kar Zubieta; Yu Lin
Journal:  J Pain       Date:  2013-02       Impact factor: 5.820

Review 10.  Addictions Neuroclinical Assessment: A Neuroscience-Based Framework for Addictive Disorders.

Authors:  Laura E Kwako; Reza Momenan; Raye Z Litten; George F Koob; David Goldman
Journal:  Biol Psychiatry       Date:  2015-11-17       Impact factor: 13.382

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.