Literature DB >> 19450667

Challenges in phenotype definition in the whole-genome era: multivariate models of memory and intelligence.

F W Sabb1, A C Burggren, R G Higier, J Fox, J He, D S Parker, R A Poldrack, W Chu, T D Cannon, N B Freimer, R M Bilder.   

Abstract

Refining phenotypes for the study of neuropsychiatric disorders is of paramount importance in neuroscience. Poor phenotype definition provides the greatest obstacle for making progress in disorders like schizophrenia, bipolar disorder, Attention Deficit/Hyperactivity Disorder (ADHD), and autism. Using freely available informatics tools developed by the Consortium for Neuropsychiatric Phenomics (CNP), we provide a framework for defining and refining latent constructs used in neuroscience research and then apply this strategy to review known genetic contributions to memory and intelligence in healthy individuals. This approach can help us begin to build multi-level phenotype models that express the interactions between constructs necessary to understand complex neuropsychiatric diseases. These results are available online through the http://www.phenowiki.org database. Further work needs to be done in order to provide consensus-building applications for the broadly defined constructs used in neuroscience research.

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Year:  2009        PMID: 19450667      PMCID: PMC2766544          DOI: 10.1016/j.neuroscience.2009.05.013

Source DB:  PubMed          Journal:  Neuroscience        ISSN: 0306-4522            Impact factor:   3.590


  109 in total

1.  A genomewide scan for intelligence identifies quantitative trait loci on 2q and 6p.

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2.  Cholesterol and triglycerides moderate the effect of apolipoprotein E on memory functioning in older adults.

Authors:  Cindy M de Frias; David Bunce; Ake Wahlin; Rolf Adolfsson; Kristel Sleegers; Marc Cruts; Christine Van Broeckhoven; Lars-Göran Nilsson
Journal:  J Gerontol B Psychol Sci Soc Sci       Date:  2007-03       Impact factor: 4.077

3.  The role of APOE epsilon4 in modulating effects of other risk factors for cognitive decline in elderly persons.

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Review 4.  Generalist genes and learning disabilities.

Authors:  Robert Plomin; Yulia Kovas
Journal:  Psychol Bull       Date:  2005-07       Impact factor: 17.737

5.  Apolipoprotein E genotype and cognitive impairment in community-dwelling black older adults.

Authors:  Dylan G Harwood; Warren W Barker; Raymond L Ownby; Michael Mullan; Ranjan Duara
Journal:  Int J Psychiatry Med       Date:  2002       Impact factor: 1.210

Review 6.  Interaction between BDNF and serotonin: role in mood disorders.

Authors:  Keri Martinowich; Bai Lu
Journal:  Neuropsychopharmacology       Date:  2007-09-19       Impact factor: 7.853

7.  Large-scale genetic fine mapping and genotype-phenotype associations implicate polymorphism in the IL2RA region in type 1 diabetes.

Authors:  Christopher E Lowe; Jason D Cooper; Todd Brusko; Neil M Walker; Deborah J Smyth; Rebecca Bailey; Kirsi Bourget; Vincent Plagnol; Sarah Field; Mark Atkinson; David G Clayton; Linda S Wicker; John A Todd
Journal:  Nat Genet       Date:  2007-08-05       Impact factor: 38.330

8.  The functional COMT polymorphism, Val 158 Met, is associated with logical memory and the personality trait intellect/imagination in a cohort of healthy 79 year olds.

Authors:  Sarah E Harris; Alan F Wright; Caroline Hayward; John M Starr; Lawrence J Whalley; Ian J Deary
Journal:  Neurosci Lett       Date:  2005-09-02       Impact factor: 3.046

9.  Genome-wide quantitative trait locus association scan of general cognitive ability using pooled DNA and 500K single nucleotide polymorphism microarrays.

Authors:  L M Butcher; O S P Davis; I W Craig; R Plomin
Journal:  Genes Brain Behav       Date:  2008-01-22       Impact factor: 3.449

10.  The brain-derived neurotrophic factor Val66Met polymorphism is associated with age-related change in reasoning skills.

Authors:  S E Harris; H Fox; A F Wright; C Hayward; J M Starr; L J Whalley; I J Deary
Journal:  Mol Psychiatry       Date:  2006-05       Impact factor: 15.992

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  18 in total

1.  Impact of phenotype definition on genome-wide association signals: empirical evaluation in human immunodeficiency virus type 1 infection.

Authors:  Evangelos Evangelou; Jacques Fellay; Sara Colombo; Javier Martinez-Picado; Niels Obel; David B Goldstein; Amalio Telenti; John P A Ioannidis
Journal:  Am J Epidemiol       Date:  2011-04-13       Impact factor: 4.897

Review 2.  The genetics of cognitive impairment in schizophrenia: a phenomic perspective.

Authors:  Robert M Bilder; Andrew Howe; Nic Novak; Fred W Sabb; D Stott Parker
Journal:  Trends Cogn Sci       Date:  2011-08-02       Impact factor: 20.229

3.  From the genome to the phenome and back: linking genes with human brain function and structure using genetically informed neuroimaging.

Authors:  H R Siebner; J H Callicott; T Sommer; V S Mattay
Journal:  Neuroscience       Date:  2009-09-12       Impact factor: 3.590

Review 4.  Schizophrenia, "Just the Facts" 6. Moving ahead with the schizophrenia concept: from the elephant to the mouse.

Authors:  Matcheri S Keshavan; Henry A Nasrallah; Rajiv Tandon
Journal:  Schizophr Res       Date:  2011-02-12       Impact factor: 4.939

Review 5.  Meta-analysis methods for genome-wide association studies and beyond.

Authors:  Evangelos Evangelou; John P A Ioannidis
Journal:  Nat Rev Genet       Date:  2013-05-09       Impact factor: 53.242

6.  Genetic complexity of episodic memory: a twin approach to studies of aging.

Authors:  William S Kremen; Matthew S Panizzon; Carol E Franz; Kelly M Spoon; Eero Vuoksimaa; Kristen C Jacobson; Terrie Vasilopoulos; Hong Xian; Jeanne M McCaffery; Brinda K Rana; Rosemary Toomey; Ruth McKenzie; Michael J Lyons
Journal:  Psychol Aging       Date:  2014-06

Review 7.  Neurocognitive functioning and genetic variation in patients with primary brain tumours.

Authors:  Jeffrey S Wefel; Kyle R Noll; Michael E Scheurer
Journal:  Lancet Oncol       Date:  2016-03-02       Impact factor: 41.316

8.  Neurogenetic effects on cognition in aging brains: a window of opportunity for intervention?

Authors:  Ivar Reinvang; Ian J Deary; Anders M Fjell; Vidar M Steen; Thomas Espeseth; Raja Parasuraman
Journal:  Front Aging Neurosci       Date:  2010-11-02       Impact factor: 5.750

Review 9.  Genetics of cognition in epilepsy.

Authors:  Robyn M Busch; Imad Najm; Bruce P Hermann; Charis Eng
Journal:  Epilepsy Behav       Date:  2014-06-25       Impact factor: 2.937

10.  The neuropsychology of schizophrenia circa 2009.

Authors:  Robert M Bilder
Journal:  Neuropsychol Rev       Date:  2009-08-13       Impact factor: 7.444

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