Literature DB >> 22683267

Rrp6p controls mRNA poly(A) tail length and its decoration with poly(A) binding proteins.

Manfred Schmid1, Mathias Bach Poulsen, Pawel Olszewski, Vicent Pelechano, Cyril Saguez, Ishaan Gupta, Lars M Steinmetz, Claire Moore, Torben Heick Jensen.   

Abstract

Poly(A) (pA) tail binding proteins (PABPs) control mRNA polyadenylation, stability, and translation. In a purified system, S. cerevisiae PABPs, Pab1p and Nab2p, are individually sufficient to provide normal pA tail length. However, it is unknown how this occurs in more complex environments. Here we find that the nuclear exosome subunit Rrp6p counteracts the in vitro and in vivo extension of mature pA tails by the noncanonical pA polymerase Trf4p. Moreover, PABP loading onto nascent pA tails is controlled by Rrp6p; while Pab1p is the major PABP, Nab2p only associates in the absence of Rrp6p. This is because Rrp6p can interact with Nab2p and displace it from pA tails, potentially leading to RNA turnover, as evidenced for certain pre-mRNAs. We suggest that a nuclear mRNP surveillance step involves targeting of Rrp6p by Nab2p-bound pA-tailed RNPs and that pre-mRNA abundance is regulated at this level.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22683267      PMCID: PMC3408791          DOI: 10.1016/j.molcel.2012.05.005

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  38 in total

1.  Identification of a regulated pathway for nuclear pre-mRNA turnover.

Authors:  C Bousquet-Antonelli; C Presutti; D Tollervey
Journal:  Cell       Date:  2000-09-15       Impact factor: 41.582

2.  The major yeast poly(A)-binding protein is associated with cleavage factor IA and functions in premessenger RNA 3'-end formation.

Authors:  L Minvielle-Sebastia; P J Preker; T Wiederkehr; Y Strahm; W Keller
Journal:  Proc Natl Acad Sci U S A       Date:  1997-07-22       Impact factor: 11.205

3.  Deletion of the PAT1 gene affects translation initiation and suppresses a PAB1 gene deletion in yeast.

Authors:  F Wyers; M Minet; M E Dufour; L T Vo; F Lacroute
Journal:  Mol Cell Biol       Date:  2000-05       Impact factor: 4.272

4.  Yeast Pab1 interacts with Rna15 and participates in the control of the poly(A) tail length in vitro.

Authors:  N Amrani; M Minet; M Le Gouar; F Lacroute; F Wyers
Journal:  Mol Cell Biol       Date:  1997-07       Impact factor: 4.272

5.  Dual requirement for yeast hnRNP Nab2p in mRNA poly(A) tail length control and nuclear export.

Authors:  Ronald E Hector; Keith R Nykamp; Sonia Dheur; James T Anderson; Priscilla J Non; Carl R Urbinati; Scott M Wilson; Lionel Minvielle-Sebastia; Maurice S Swanson
Journal:  EMBO J       Date:  2002-04-02       Impact factor: 11.598

6.  Capped mRNA degradation intermediates accumulate in the yeast spb8-2 mutant.

Authors:  R Boeck; B Lapeyre; C E Brown; A B Sachs
Journal:  Mol Cell Biol       Date:  1998-09       Impact factor: 4.272

7.  Nuclear surveillance and degradation of hypomodified initiator tRNAMet in S. cerevisiae.

Authors:  Sujatha Kadaba; Anna Krueger; Tamyra Trice; Annette M Krecic; Alan G Hinnebusch; James Anderson
Journal:  Genes Dev       Date:  2004-05-14       Impact factor: 11.361

8.  Nuclear retention of unspliced mRNAs in yeast is mediated by perinuclear Mlp1.

Authors:  Vincent Galy; Olivier Gadal; Micheline Fromont-Racine; Alper Romano; Alain Jacquier; Ulf Nehrbass
Journal:  Cell       Date:  2004-01-09       Impact factor: 41.582

9.  Poly(A) tail length control in Saccharomyces cerevisiae occurs by message-specific deadenylation.

Authors:  C E Brown; A B Sachs
Journal:  Mol Cell Biol       Date:  1998-11       Impact factor: 4.272

10.  mRNP quality control goes regulatory.

Authors:  Oliver Mühlemann; Torben Heick Jensen
Journal:  Trends Genet       Date:  2011-12-09       Impact factor: 11.639

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  43 in total

Review 1.  The regulation and functions of the nuclear RNA exosome complex.

Authors:  Cornelia Kilchert; Sina Wittmann; Lidia Vasiljeva
Journal:  Nat Rev Mol Cell Biol       Date:  2016-01-04       Impact factor: 94.444

Review 2.  The multitasking polyA tail: nuclear RNA maturation, degradation and export.

Authors:  Agnieszka Tudek; Marta Lloret-Llinares; Torben Heick Jensen
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-11-05       Impact factor: 6.237

3.  The RNA exosome shapes the expression of key protein-coding genes.

Authors:  Mengjun Wu; Evdoxia Karadoulama; Marta Lloret-Llinares; Jerome Olivier Rouviere; Christian Skov Vaagensø; Martin Moravec; Bingnan Li; Jingwen Wang; Guifen Wu; Maria Gockert; Vicent Pelechano; Torben Heick Jensen; Albin Sandelin
Journal:  Nucleic Acids Res       Date:  2020-09-04       Impact factor: 16.971

4.  The cytoplasmic mRNA degradation factor Pat1 is required for rRNA processing.

Authors:  Mridula Muppavarapu; Susanne Huch; Tracy Nissan
Journal:  RNA Biol       Date:  2016-02-26       Impact factor: 4.652

Review 5.  Transcription termination and the control of the transcriptome: why, where and how to stop.

Authors:  Odil Porrua; Domenico Libri
Journal:  Nat Rev Mol Cell Biol       Date:  2015-02-04       Impact factor: 94.444

6.  Targeting the nuclear RNA exosome: Poly(A) binding proteins enter the stage.

Authors:  Nicola Meola; Torben Heick Jensen
Journal:  RNA Biol       Date:  2017-04-19       Impact factor: 4.652

Review 7.  RNA Exosome and Non-coding RNA-Coupled Mechanisms in AID-Mediated Genomic Alterations.

Authors:  Brice Laffleur; Uttiya Basu; Junghyun Lim
Journal:  J Mol Biol       Date:  2017-01-07       Impact factor: 5.469

8.  The Evolutionarily-conserved Polyadenosine RNA Binding Protein, Nab2, Cooperates with Splicing Machinery to Regulate the Fate of pre-mRNA.

Authors:  Sharon Soucek; Yi Zeng; Deepti L Bellur; Megan Bergkessel; Kevin J Morris; Qiudong Deng; Duc Duong; Nicholas T Seyfried; Christine Guthrie; Jonathan P Staley; Milo B Fasken; Anita H Corbett
Journal:  Mol Cell Biol       Date:  2016-08-15       Impact factor: 4.272

Review 9.  Poly(A) binding proteins: are they all created equal?

Authors:  Dixie J Goss; Frida Esther Kleiman
Journal:  Wiley Interdiscip Rev RNA       Date:  2012-12-13       Impact factor: 9.957

Review 10.  Rrp6: Integrated roles in nuclear RNA metabolism and transcription termination.

Authors:  Melanie J Fox; Amber L Mosley
Journal:  Wiley Interdiscip Rev RNA       Date:  2015-11-26       Impact factor: 9.957

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