Literature DB >> 26726035

The regulation and functions of the nuclear RNA exosome complex.

Cornelia Kilchert1, Sina Wittmann1, Lidia Vasiljeva1.   

Abstract

The RNA exosome complex is the most versatile RNA-degradation machine in eukaryotes. The exosome has a central role in several aspects of RNA biogenesis, including RNA maturation and surveillance. Moreover, it is emerging as an important player in regulating the expression levels of specific mRNAs in response to environmental cues and during cell differentiation and development. Although the mechanisms by which RNA is targeted to (or escapes from) the exosome are still not fully understood, general principles have begun to emerge, which we discuss in this Review. In addition, we introduce and discuss novel, previously unappreciated functions of the nuclear exosome, including in transcription regulation and in the maintenance of genome stability.

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Year:  2016        PMID: 26726035     DOI: 10.1038/nrm.2015.15

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  170 in total

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2.  Regulation of axon guidance by compartmentalized nonsense-mediated mRNA decay.

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4.  Importance of polyadenylation in the selective elimination of meiotic mRNAs in growing S. pombe cells.

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5.  Nuclear surveillance and degradation of hypomodified initiator tRNAMet in S. cerevisiae.

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Journal:  Genes Dev       Date:  2004-05-14       Impact factor: 11.361

6.  The homologous recombination machinery modulates the formation of RNA-DNA hybrids and associated chromosome instability.

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Journal:  Elife       Date:  2013-06-11       Impact factor: 8.140

7.  Deletion of the nuclear exosome component RRP6 leads to continued accumulation of the histone mRNA HTB1 in S-phase of the cell cycle in Saccharomyces cerevisiae.

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8.  Widespread exon skipping triggers degradation by nuclear RNA surveillance in fission yeast.

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Review 9.  Out of balance: R-loops in human disease.

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10.  The Nrd1-Nab3-Sen1 termination complex interacts with the Ser5-phosphorylated RNA polymerase II C-terminal domain.

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  149 in total

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Journal:  Nucleic Acids Res       Date:  2020-09-04       Impact factor: 16.971

3.  The RNA exosome contributes to gene expression regulation during stem cell differentiation.

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Journal:  Nucleic Acids Res       Date:  2018-11-30       Impact factor: 16.971

Review 4.  DNA-launched live-attenuated vaccines for biodefense applications.

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5.  The cryptic unstable transcripts are associated with developmentally regulated gene expression in blood-stage Plasmodium falciparum.

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6.  Targeting the nuclear RNA exosome: Poly(A) binding proteins enter the stage.

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Journal:  RNA Biol       Date:  2017-04-19       Impact factor: 4.652

7.  Gene length as a biological timer to establish temporal transcriptional regulation.

Authors:  Killeen S Kirkconnell; Brian Magnuson; Michelle T Paulsen; Brian Lu; Karan Bedi; Mats Ljungman
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Review 8.  The GATA factor revolution in hematology.

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9.  Transcriptional Pause Sites Delineate Stable Nucleosome-Associated Premature Polyadenylation Suppressed by U1 snRNP.

Authors:  Anthony C Chiu; Hiroshi I Suzuki; Xuebing Wu; Dig B Mahat; Andrea J Kriz; Phillip A Sharp
Journal:  Mol Cell       Date:  2018-02-01       Impact factor: 17.970

10.  Helicase-Dependent RNA Decay Illuminated by a Cryo-EM Structure of a Human Nuclear RNA Exosome-MTR4 Complex.

Authors:  Eva-Maria Weick; M Rhyan Puno; Kurt Januszyk; John C Zinder; Michael A DiMattia; Christopher D Lima
Journal:  Cell       Date:  2018-06-14       Impact factor: 41.582

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