Literature DB >> 22635995

Discovery of a trans-dichloroethene-respiring Dehalogenimonas species in the 1,1,2,2-tetrachloroethane-dechlorinating WBC-2 consortium.

Marie J Manchester1, Laura A Hug, Matt Zarek, Anna Zila, Elizabeth A Edwards.   

Abstract

The WBC-2 consortium is an organohalide-respiring anaerobic microbial enrichment culture capable of dechlorinating 1,1,2,2-tetrachloroethane (TeCA) to ethene. In the WBC-2 culture, TeCA is first transformed to trans-dichloroethene (tDCE) by dichloroelimination; tDCE is subsequently transformed to vinyl chloride (VC) and then to ethene by hydrogenolysis. Analysis of 16S rRNA gene clone libraries from culture DNA revealed sequences from three putative dechlorinating organisms belonging to Dehalococcoides, Dehalobacter, and Dehalogenimonas genera. Quantitative PCR primers were designed for each of these sequences, and their abundance was quantified in enrichment cultures over time. These data revealed that complete dechlorination of TeCA to ethene involves all three organisms. Dehalobacter spp. grew during the dihaloelimination of TeCA to tDCE, while Dehalococcoides and Dehalogenimonas spp. grew during hydrogenolysis of tDCE to ethene. This is the first time a genus other than Dehalococcoides has been implicated in dechlorination of tDCE to VC.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22635995      PMCID: PMC3416446          DOI: 10.1128/AEM.00384-12

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  20 in total

1.  A new mathematical model for relative quantification in real-time RT-PCR.

Authors:  M W Pfaffl
Journal:  Nucleic Acids Res       Date:  2001-05-01       Impact factor: 16.971

2.  MUSCLE: multiple sequence alignment with high accuracy and high throughput.

Authors:  Robert C Edgar
Journal:  Nucleic Acids Res       Date:  2004-03-19       Impact factor: 16.971

3.  Bellerophon: a program to detect chimeric sequences in multiple sequence alignments.

Authors:  Thomas Huber; Geoffrey Faulkner; Philip Hugenholtz
Journal:  Bioinformatics       Date:  2004-04-08       Impact factor: 6.937

4.  Isolation and characterization of Desulfitobacterium sp. strain Y51 capable of efficient dehalogenation of tetrachloroethene and polychloroethanes.

Authors:  A Suyama; R Iwakiri; K Kai; T Tokunaga; N Sera; K Furukawa
Journal:  Biosci Biotechnol Biochem       Date:  2001-07       Impact factor: 2.043

5.  Dehalococcoides mccartyi gen. nov., sp. nov., obligately organohalide-respiring anaerobic bacteria relevant to halogen cycling and bioremediation, belong to a novel bacterial class, Dehalococcoidia classis nov., order Dehalococcoidales ord. nov. and family Dehalococcoidaceae fam. nov., within the phylum Chloroflexi.

Authors:  Frank E Löffler; Jun Yan; Kirsti M Ritalahti; Lorenz Adrian; Elizabeth A Edwards; Konstantinos T Konstantinidis; Jochen A Müller; Heather Fullerton; Stephen H Zinder; Alfred M Spormann
Journal:  Int J Syst Evol Microbiol       Date:  2012-04-27       Impact factor: 2.747

6.  Characterization of two tetrachloroethene-reducing, acetate-oxidizing anaerobic bacteria and their description as Desulfuromonas michiganensis sp. nov.

Authors:  Youlboong Sung; Kirsti M Ritalahti; Robert A Sanford; John W Urbance; Shannon J Flynn; James M Tiedje; Frank E Löffler
Journal:  Appl Environ Microbiol       Date:  2003-05       Impact factor: 4.792

7.  Anaerobic microbial reductive dechlorination of tetrachloroethene to predominately trans-1,2-dichloroethene.

Authors:  Benjamin M Griffin; James M Tiedje; Frank E Löffler
Journal:  Environ Sci Technol       Date:  2004-08-15       Impact factor: 9.028

8.  Characterization of a highly enriched dehalococcoides-containing culture that grows on vinyl chloride and trichloroethene.

Authors:  Melanie Duhamel; Kaiguo Mo; Elizabeth A Edwards
Journal:  Appl Environ Microbiol       Date:  2004-09       Impact factor: 4.792

9.  Vinyl chloride and cis-dichloroethene dechlorination kinetics and microorganism growth under substrate limiting conditions.

Authors:  Alison M Cupples; Alfred M Spormann; Perry L McCarty
Journal:  Environ Sci Technol       Date:  2004-02-15       Impact factor: 9.028

10.  Anaerobic degradation of toluene and o-xylene by a methanogenic consortium.

Authors:  E A Edwards; D Grbić-Galić
Journal:  Appl Environ Microbiol       Date:  1994-01       Impact factor: 4.792

View more
  10 in total

1.  Normalized Quantitative PCR Measurements as Predictors for Ethene Formation at Sites Impacted with Chlorinated Ethenes.

Authors:  Katherine Clark; Dora M Taggart; Brett R Baldwin; Kirsti M Ritalahti; Robert W Murdoch; Janet K Hatt; Frank E Löffler
Journal:  Environ Sci Technol       Date:  2018-11-08       Impact factor: 9.028

2.  Isotopic effects of PCE induced by organohalide-respiring bacteria.

Authors:  Simon Leitner; Harald Berger; Markus Gorfer; Thomas G Reichenauer; Andrea Watzinger
Journal:  Environ Sci Pollut Res Int       Date:  2017-09-15       Impact factor: 4.223

3.  Dehalogenation of Chlorinated Ethenes to Ethene by a Novel Isolate, "Candidatus Dehalogenimonas etheniformans".

Authors:  Gao Chen; Fadime Kara Murdoch; Yongchao Xie; Robert W Murdoch; Yiru Cui; Yi Yang; Jun Yan; Trent A Key; Frank E Löffler
Journal:  Appl Environ Microbiol       Date:  2022-06-08       Impact factor: 5.005

4.  Dehalogenimonas sp. Strain WBC-2 Genome and Identification of Its trans-Dichloroethene Reductive Dehalogenase, TdrA.

Authors:  Olivia Molenda; Andrew T Quaile; Elizabeth A Edwards
Journal:  Appl Environ Microbiol       Date:  2015-10-09       Impact factor: 4.792

5.  Diversity of reductive dehalogenase genes from environmental samples and enrichment cultures identified with degenerate primer PCR screens.

Authors:  Laura A Hug; Elizabeth A Edwards
Journal:  Front Microbiol       Date:  2013-11-19       Impact factor: 5.640

6.  Distribution of Dehalococcoidia in the Anaerobic Deep Water of a Remote Meromictic Crater Lake and Detection of Dehalococcoidia-Derived Reductive Dehalogenase Homologous Genes.

Authors:  Corinne Biderre-Petit; Eric Dugat-Bony; Mickaël Mege; Nicolas Parisot; Lorenz Adrian; Anne Moné; Jérémie Denonfoux; Eric Peyretaillade; Didier Debroas; Delphine Boucher; Pierre Peyret
Journal:  PLoS One       Date:  2016-01-06       Impact factor: 3.240

7.  Complete Genome Sequence of Dehalococcoides mccartyi Strain WBC-2, Capable of Anaerobic Reductive Dechlorination of Vinyl Chloride.

Authors:  Olivia Molenda; Shuiquan Tang; Elizabeth A Edwards
Journal:  Genome Announc       Date:  2016-12-22

Review 8.  Dehalogenases: From Improved Performance to Potential Microbial Dehalogenation Applications.

Authors:  Thiau-Fu Ang; Jonathan Maiangwa; Abu Bakar Salleh; Yahaya M Normi; Thean Chor Leow
Journal:  Molecules       Date:  2018-05-07       Impact factor: 4.411

Review 9.  Overview of organohalide-respiring bacteria and a proposal for a classification system for reductive dehalogenases.

Authors:  Laura A Hug; Farai Maphosa; David Leys; Frank E Löffler; Hauke Smidt; Elizabeth A Edwards; Lorenz Adrian
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-03-11       Impact factor: 6.237

10.  Chlorinated Electron Acceptor Abundance Drives Selection of Dehalococcoides mccartyi (D. mccartyi) Strains in Dechlorinating Enrichment Cultures and Groundwater Environments.

Authors:  Alfredo Pérez-de-Mora; Anna Lacourt; Michaye L McMaster; Xiaoming Liang; Sandra M Dworatzek; Elizabeth A Edwards
Journal:  Front Microbiol       Date:  2018-05-17       Impact factor: 5.640

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.