Literature DB >> 22622014

Up-frameshift protein 1 (UPF1): multitalented entertainer in RNA decay.

N Imamachi1, H Tani, N Akimitsu.   

Abstract

Up-frameshift protein 1 (UPF1) is an evolutionarily conserved protein with RNA/DNA-dependent ATPase and RNA helicase activity. The protein is well known for its central role in nonsense-mediated mRNA decay (NMD), which eliminates aberrant mRNAs harboring premature termination codon (PTC), preventing the accumulation of nonfunctional or potentially harmful truncated proteins. NMD is also involved in the regulation of the state-levels of many normal physiological mRNAs. Moreover UPF1 is not only a key player in NMD but is also involved in non-NMD RNA degradation, such as staufen1 (STAU1)-mediated mRNA decay (SMD) and replication-dependent histone mRNA decay. Thus, UPF1 is an important factor for the RNA quality control system and the regulation of physiological gene expression. Further, recent studies have clarified that UPF1 contributes to DNA replication, DNA repair, telomere metabolism, and stabilization of HIV-1 genomic RNA. In the review, we summarize numerous functions of UPF1.

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Year:  2012        PMID: 22622014

Source DB:  PubMed          Journal:  Drug Discov Ther        ISSN: 1881-7831


  23 in total

Review 1.  Nonsense-mediated mRNA decay: an intricate machinery that shapes transcriptomes.

Authors:  Søren Lykke-Andersen; Torben Heick Jensen
Journal:  Nat Rev Mol Cell Biol       Date:  2015-09-23       Impact factor: 94.444

2.  Identification of hundreds of novel UPF1 target transcripts by direct determination of whole transcriptome stability.

Authors:  Hidenori Tani; Naoto Imamachi; Kazi Abdus Salam; Rena Mizutani; Kenichi Ijiri; Takuma Irie; Tetsushi Yada; Yutaka Suzuki; Nobuyoshi Akimitsu
Journal:  RNA Biol       Date:  2012-10-12       Impact factor: 4.652

Review 3.  Cellular RNA helicases and HIV-1: insights from genome-wide, proteomic, and molecular studies.

Authors:  Chia-Yen Chen; Xiang Liu; Kathleen Boris-Lawrie; Amit Sharma; Kuan-Teh Jeang
Journal:  Virus Res       Date:  2012-07-16       Impact factor: 3.303

4.  A Staufen1-mediated decay pathway influences the local transcriptome in axons.

Authors:  Ju Youn Kim; Alessia Deglincerti; Samie R Jaffrey
Journal:  Translation (Austin)       Date:  2017-12-12

Review 5.  Upf proteins: highly conserved factors involved in nonsense mRNA mediated decay.

Authors:  Puneet Gupta; Yan-Ruide Li
Journal:  Mol Biol Rep       Date:  2017-12-27       Impact factor: 2.316

Review 6.  Genome-wide technology for determining RNA stability in mammalian cells: historical perspective and recent advantages based on modified nucleotide labeling.

Authors:  Hidenori Tani; Nobuyoshi Akimitsu
Journal:  RNA Biol       Date:  2012-10-01       Impact factor: 4.652

7.  Control of myogenesis by rodent SINE-containing lncRNAs.

Authors:  Jiashi Wang; Chenguang Gong; Lynne E Maquat
Journal:  Genes Dev       Date:  2013-04-04       Impact factor: 11.361

Review 8.  The growth arrest-specific transcript 5 (GAS5): a pivotal tumor suppressor long noncoding RNA in human cancers.

Authors:  Chenhui Ma; Xuefei Shi; Qingqing Zhu; Qian Li; Yafang Liu; Yanwen Yao; Yong Song
Journal:  Tumour Biol       Date:  2015-12-03

9.  The Rpe65 rd12 allele exerts a semidominant negative effect on vision in mice.

Authors:  Charles B Wright; Micah A Chrenek; Wei Feng; Shannon E Getz; Todd Duncan; Machelle T Pardue; Yue Feng; T Michael Redmond; Jeffrey H Boatright; John M Nickerson
Journal:  Invest Ophthalmol Vis Sci       Date:  2014-04-17       Impact factor: 4.799

Review 10.  How Dysregulated Ion Channels and Transporters Take a Hand in Esophageal, Liver, and Colorectal Cancer.

Authors:  Christian Stock
Journal:  Rev Physiol Biochem Pharmacol       Date:  2021       Impact factor: 5.545

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