Literature DB >> 22593169

Cryphonectria nitschkei virus 1 structure shows that the capsid protein of chrysoviruses is a duplicated helix-rich fold conserved in fungal double-stranded RNA viruses.

Josué Gómez-Blanco1, Daniel Luque, José M González, José L Carrascosa, Carlos Alfonso, Benes Trus, Wendy M Havens, Said A Ghabrial, José R Castón.   

Abstract

Cryoelectron microscopy reconstruction of Cryphonectria nitschkei virus 1, a double-stranded RNA (dsRNA) virus, shows that the capsid protein (60 copies/particle) is formed by a repeated helical core, indicative of gene duplication. This unusual organization is common to chrysoviruses. The arrangement of many of these putative α-helices is conserved in the totivirus L-A capsid protein, suggesting a shared motif. Our results indicate that a 120-subunit T=1 capsid is a conserved architecture that optimizes dsRNA replication and organization.

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Year:  2012        PMID: 22593169      PMCID: PMC3421698          DOI: 10.1128/JVI.00802-12

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  15 in total

1.  Molecular characterization of Penicillium chrysogenum virus: reconsideration of the taxonomy of the genus Chrysovirus.

Authors:  Daohong Jiang; Said A Ghabrial
Journal:  J Gen Virol       Date:  2004-07       Impact factor: 3.891

2.  UCSF Chimera--a visualization system for exploratory research and analysis.

Authors:  Eric F Pettersen; Thomas D Goddard; Conrad C Huang; Gregory S Couch; Daniel M Greenblatt; Elaine C Meng; Thomas E Ferrin
Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

3.  Common ancestry of herpesviruses and tailed DNA bacteriophages.

Authors:  Matthew L Baker; Wen Jiang; Frazer J Rixon; Wah Chiu
Journal:  J Virol       Date:  2005-12       Impact factor: 5.103

4.  Structural polymorphism of the major capsid protein of a double-stranded RNA virus: an amphipathic alpha helix as a molecular switch.

Authors:  Irene Saugar; Daniel Luque; Ana Oña; José F Rodríguez; José L Carrascosa; Benes L Trus; José R Castón
Journal:  Structure       Date:  2005-07       Impact factor: 5.006

5.  L-A virus at 3.4 A resolution reveals particle architecture and mRNA decapping mechanism.

Authors:  Hisashi Naitow; Jinghua Tang; Mary Canady; Reed B Wickner; John E Johnson
Journal:  Nat Struct Biol       Date:  2002-10

6.  Image processing for electron microscopy single-particle analysis using XMIPP.

Authors:  Sjors H W Scheres; Rafael Núñez-Ramírez; Carlos O S Sorzano; José María Carazo; Roberto Marabini
Journal:  Nat Protoc       Date:  2008       Impact factor: 13.491

Review 7.  What does structure tell us about virus evolution?

Authors:  Dennis H Bamford; Jonathan M Grimes; David I Stuart
Journal:  Curr Opin Struct Biol       Date:  2005-11-03       Impact factor: 6.809

8.  Infectious bursal disease virus capsid assembly and maturation by structural rearrangements of a transient molecular switch.

Authors:  Daniel Luque; Irene Saugar; José F Rodríguez; Nuria Verdaguer; Damiá Garriga; Carmen San Martín; Javier A Velázquez-Muriel; Benes L Trus; José L Carrascosa; José R Castón
Journal:  J Virol       Date:  2007-04-18       Impact factor: 5.103

9.  Atomic structure reveals the unique capsid organization of a dsRNA virus.

Authors:  Junhua Pan; Liping Dong; Li Lin; Wendy F Ochoa; Robert S Sinkovits; Wendy M Havens; Max L Nibert; Timothy S Baker; Said A Ghabrial; Yizhi Jane Tao
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-25       Impact factor: 11.205

Review 10.  Structure unifies the viral universe.

Authors:  Nicola G A Abrescia; Dennis H Bamford; Jonathan M Grimes; David I Stuart
Journal:  Annu Rev Biochem       Date:  2012-04-05       Impact factor: 23.643

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  7 in total

1.  Hypovirulence of the phytopathogenic fungus Botryosphaeria dothidea: association with a coinfecting chrysovirus and a partitivirus.

Authors:  LiPing Wang; JingJing Jiang; YanFen Wang; Ni Hong; Fangpeng Zhang; WenXing Xu; GuoPing Wang
Journal:  J Virol       Date:  2014-04-23       Impact factor: 5.103

2.  Cryo-EM near-atomic structure of a dsRNA fungal virus shows ancient structural motifs preserved in the dsRNA viral lineage.

Authors:  Daniel Luque; Josué Gómez-Blanco; Damiá Garriga; Axel F Brilot; José M González; Wendy M Havens; José L Carrascosa; Benes L Trus; Nuria Verdaguer; Said A Ghabrial; José R Castón
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-12       Impact factor: 11.205

3.  Heterodimers as the Structural Unit of the T=1 Capsid of the Fungal Double-Stranded RNA Rosellinia necatrix Quadrivirus 1.

Authors:  Daniel Luque; Carlos P Mata; Fernando González-Camacho; José M González; Josué Gómez-Blanco; Carlos Alfonso; Germán Rivas; Wendy M Havens; Satoko Kanematsu; Nobuhiro Suzuki; Said A Ghabrial; Benes L Trus; José R Castón
Journal:  J Virol       Date:  2016-11-28       Impact factor: 5.103

Review 4.  3D structures of fungal partitiviruses.

Authors:  Max L Nibert; Jinghua Tang; Jiatao Xie; Aaron M Collier; Said A Ghabrial; Timothy S Baker; Yizhi J Tao
Journal:  Adv Virus Res       Date:  2013       Impact factor: 9.937

5.  Acquisition of functions on the outer capsid surface during evolution of double-stranded RNA fungal viruses.

Authors:  Carlos P Mata; Daniel Luque; Josué Gómez-Blanco; Javier M Rodríguez; José M González; Nobuhiro Suzuki; Said A Ghabrial; José L Carrascosa; Benes L Trus; José R Castón
Journal:  PLoS Pathog       Date:  2017-12-08       Impact factor: 6.823

6.  Three-dimensional structure of victorivirus HvV190S suggests coat proteins in most totiviruses share a conserved core.

Authors:  Sarah E Dunn; Hua Li; Giovanni Cardone; Max L Nibert; Said A Ghabrial; Timothy S Baker
Journal:  PLoS Pathog       Date:  2013-03-14       Impact factor: 6.823

Review 7.  Capsid Structure of dsRNA Fungal Viruses.

Authors:  Daniel Luque; Carlos P Mata; Nobuhiro Suzuki; Said A Ghabrial; José R Castón
Journal:  Viruses       Date:  2018-09-07       Impact factor: 5.048

  7 in total

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