Literature DB >> 22590382

3-(2,4-Dichloro-phen-yl)-5-(4-fluoro-phen-yl)-2-methyl-7-(trifluoro-meth-yl)pyrazolo-[1,5-a]pyrimidine.

Ju Liu, Zhi-Qiang Cai, Yang Wang, Ming-Jun Jiang, Li-Feng Xu.   

Abstract

In the title compound, C(20)H(11)Cl(2)F(4)N(3), the central pyrazolo-[1,5-a]pyrimidine unit is almost planar [the mean deviation from the best least-square plane through the nine atoms is 0.006 (2) Å]. The fluoro-benzene ring is rotated out of this plane by 10.3 (3)°, whereas the dichloro-benzene ring is rotated by 46.2 (3)°. The crystal packing is dominated by Cl⋯Cl inter-actions of 3.475 (3) Å and van der Waals inter-actions.

Entities:  

Year:  2012        PMID: 22590382      PMCID: PMC3344620          DOI: 10.1107/S1600536812017345

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of other pyrazolo­[1,5-a]pyrimidine derivatives and for their pharmacological applications, see: Fraley et al. (2012 ▶); Novinson et al. (1976 ▶); Senga et al. (1981 ▶); Suzuki et al. (2001 ▶). For related structures, see: Liu et al. (2012 ▶); Bui et al. (2009 ▶).

Experimental

Crystal data

C20H11Cl2F4N3 M = 440.22 Orthorhombic, a = 9.5361 (19) Å b = 15.941 (3) Å c = 24.853 (5) Å V = 3778.0 (13) Å3 Z = 8 Mo Kα radiation μ = 0.39 mm−1 T = 298 K 0.20 × 0.18 × 0.16 mm

Data collection

Rigaku Saturn diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005) ▶ T min = 0.926, T max = 0.940 34334 measured reflections 4477 independent reflections 3517 reflections with I > 2σ(I) R int = 0.049

Refinement

R[F 2 > 2σ(F 2)] = 0.055 wR(F 2) = 0.153 S = 1.08 4477 reflections 264 parameters H-atom parameters constrained Δρmax = 0.27 e Å−3 Δρmin = −0.34 e Å−3 Data collection: RAPID-AUTO (Rigaku, 1998) ▶; cell refinement: RAPID-AUTO ▶; data reduction: CrystalClear (Rigaku/MSC, 2005) ▶; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812017345/kp2407sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812017345/kp2407Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812017345/kp2407Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H11Cl2F4N3F(000) = 1776
Mr = 440.22Dx = 1.548 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 8300 reflections
a = 9.5361 (19) Åθ = 2.3–27.9°
b = 15.941 (3) ŵ = 0.39 mm1
c = 24.853 (5) ÅT = 298 K
V = 3778.0 (13) Å3Block, yellow
Z = 80.20 × 0.18 × 0.16 mm
Rigaku Saturn diffractometer4477 independent reflections
Radiation source: rotating anode3517 reflections with I > 2σ(I)
Confocal monochromatorRint = 0.049
ω scansθmax = 27.9°, θmin = 2.6°
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005)h = −11→12
Tmin = 0.926, Tmax = 0.940k = −20→20
34334 measured reflectionsl = −32→32
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.055H-atom parameters constrained
wR(F2) = 0.153w = 1/[σ2(Fo2) + (0.0762P)2 + 0.9456P] where P = (Fo2 + 2Fc2)/3
S = 1.08(Δ/σ)max = 0.002
4477 reflectionsΔρmax = 0.27 e Å3
264 parametersΔρmin = −0.34 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0093 (10)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.65368 (10)−0.11103 (5)0.54765 (3)0.0819 (3)
Cl20.61073 (8)0.22387 (4)0.56049 (3)0.0626 (2)
F10.25116 (18)0.44152 (9)0.75453 (7)0.0707 (4)
F20.06282 (16)0.37077 (10)0.75226 (7)0.0726 (5)
F30.1688 (2)0.39016 (11)0.82698 (6)0.0841 (6)
F40.6356 (2)−0.01913 (11)0.96188 (6)0.0839 (5)
N10.44109 (19)0.15634 (11)0.74870 (6)0.0430 (4)
N20.30004 (19)0.27037 (11)0.71649 (6)0.0416 (4)
N30.2542 (2)0.30511 (11)0.66969 (7)0.0467 (4)
C10.4349 (2)0.03787 (14)0.64421 (9)0.0495 (5)
H10.37490.03120.67340.059*
C20.4924 (3)−0.03226 (14)0.62119 (10)0.0557 (6)
H20.4712−0.08540.63430.067*
C30.5822 (3)−0.02252 (15)0.57820 (9)0.0540 (6)
C40.6166 (3)0.05579 (15)0.55899 (9)0.0534 (6)
H40.67850.06170.53030.064*
C50.5576 (2)0.12577 (13)0.58318 (8)0.0442 (5)
C60.4625 (2)0.11903 (13)0.62578 (8)0.0409 (5)
C70.3930 (2)0.19044 (13)0.65241 (8)0.0414 (5)
C80.3106 (2)0.25618 (13)0.63129 (8)0.0440 (5)
C90.2755 (3)0.27527 (16)0.57386 (8)0.0575 (6)
H9A0.18410.30030.57200.086*
H9B0.27630.22430.55330.086*
H9C0.34370.31350.55950.086*
C100.3844 (2)0.20017 (13)0.70785 (8)0.0407 (4)
C110.4124 (2)0.18080 (13)0.79856 (8)0.0417 (5)
C120.4725 (2)0.12953 (13)0.84255 (8)0.0422 (5)
C130.4680 (3)0.15520 (15)0.89601 (9)0.0566 (6)
H130.42720.20640.90480.068*
C140.5237 (3)0.10527 (17)0.93628 (9)0.0644 (7)
H140.52170.12270.97200.077*
C150.5813 (3)0.03045 (15)0.92273 (9)0.0557 (6)
C160.5893 (3)0.00274 (14)0.87055 (10)0.0562 (6)
H160.6305−0.04860.86240.067*
C170.5345 (3)0.05311 (14)0.83055 (9)0.0499 (5)
H170.53920.03550.79490.060*
C180.3272 (2)0.25229 (13)0.80901 (8)0.0448 (5)
H180.30900.26850.84430.054*
C190.2727 (2)0.29661 (13)0.76758 (8)0.0428 (5)
C200.1884 (3)0.37488 (14)0.77517 (9)0.0499 (5)
U11U22U33U12U13U23
Cl10.1165 (7)0.0593 (4)0.0700 (5)0.0266 (4)0.0131 (4)−0.0112 (3)
Cl20.0768 (5)0.0527 (4)0.0582 (4)−0.0109 (3)0.0173 (3)0.0097 (3)
F10.0777 (10)0.0447 (8)0.0896 (11)0.0045 (7)0.0037 (8)0.0058 (7)
F20.0491 (9)0.0751 (10)0.0938 (12)0.0153 (7)−0.0084 (8)−0.0075 (9)
F30.1183 (15)0.0839 (11)0.0501 (9)0.0531 (10)0.0102 (8)−0.0051 (7)
F40.1151 (14)0.0751 (11)0.0615 (9)0.0177 (10)−0.0265 (9)0.0221 (8)
N10.0519 (10)0.0432 (9)0.0341 (8)0.0063 (8)0.0011 (7)0.0031 (7)
N20.0484 (10)0.0413 (9)0.0350 (8)0.0070 (7)−0.0006 (7)0.0019 (7)
N30.0564 (11)0.0457 (10)0.0382 (9)0.0073 (8)−0.0067 (8)0.0046 (7)
C10.0567 (14)0.0476 (12)0.0442 (11)−0.0017 (10)0.0107 (10)0.0050 (9)
C20.0717 (16)0.0405 (11)0.0549 (13)−0.0022 (11)0.0065 (11)0.0046 (10)
C30.0676 (15)0.0467 (12)0.0476 (12)0.0093 (11)0.0010 (11)−0.0059 (10)
C40.0631 (15)0.0569 (14)0.0403 (11)0.0036 (11)0.0107 (10)−0.0007 (9)
C50.0525 (13)0.0451 (11)0.0352 (10)−0.0032 (9)0.0033 (9)0.0032 (8)
C60.0475 (12)0.0417 (10)0.0335 (9)−0.0014 (9)−0.0009 (8)−0.0003 (8)
C70.0485 (12)0.0413 (11)0.0345 (9)0.0007 (9)0.0022 (8)0.0017 (8)
C80.0518 (13)0.0428 (11)0.0374 (10)−0.0006 (9)−0.0029 (8)0.0024 (8)
C90.0748 (17)0.0587 (14)0.0389 (11)0.0084 (12)−0.0087 (11)0.0016 (10)
C100.0463 (11)0.0394 (10)0.0364 (10)0.0042 (8)0.0017 (8)0.0035 (8)
C110.0481 (12)0.0412 (11)0.0357 (10)0.0035 (9)0.0029 (8)0.0023 (8)
C120.0501 (12)0.0402 (10)0.0363 (10)0.0005 (9)−0.0005 (8)0.0034 (8)
C130.0766 (17)0.0541 (13)0.0392 (11)0.0139 (12)0.0002 (11)0.0021 (10)
C140.089 (2)0.0681 (16)0.0360 (11)0.0103 (14)−0.0060 (12)0.0032 (10)
C150.0661 (15)0.0544 (13)0.0465 (12)0.0013 (11)−0.0125 (11)0.0155 (10)
C160.0677 (16)0.0443 (12)0.0567 (14)0.0089 (11)−0.0113 (11)0.0048 (10)
C170.0630 (15)0.0459 (12)0.0409 (11)0.0067 (10)−0.0064 (10)0.0000 (9)
C180.0529 (13)0.0452 (11)0.0362 (10)0.0071 (9)0.0056 (9)0.0022 (8)
C190.0463 (12)0.0432 (11)0.0388 (10)0.0033 (9)0.0033 (8)0.0009 (8)
C200.0559 (14)0.0485 (12)0.0453 (12)0.0114 (10)0.0021 (10)0.0000 (9)
Cl1—C31.741 (2)C7—C101.389 (3)
Cl2—C51.738 (2)C7—C81.411 (3)
F1—C201.323 (3)C8—C91.497 (3)
F2—C201.328 (3)C9—H9A0.9600
F3—C201.324 (3)C9—H9B0.9600
F4—C151.356 (3)C9—H9C0.9600
N1—C111.327 (2)C11—C181.424 (3)
N1—C101.346 (2)C11—C121.480 (3)
N2—N31.360 (2)C12—C171.386 (3)
N2—C191.362 (2)C12—C131.391 (3)
N2—C101.395 (3)C13—C141.385 (3)
N3—C81.345 (3)C13—H130.9300
C1—C21.370 (3)C14—C151.355 (4)
C1—C61.397 (3)C14—H140.9300
C1—H10.9300C15—C161.372 (3)
C2—C31.378 (3)C16—C171.381 (3)
C2—H20.9300C16—H160.9300
C3—C41.376 (3)C17—H170.9300
C4—C51.387 (3)C18—C191.353 (3)
C4—H40.9300C18—H180.9300
C5—C61.398 (3)C19—C201.496 (3)
C6—C71.474 (3)
C11—N1—C10117.98 (18)N1—C10—N2122.14 (18)
N3—N2—C19127.64 (17)C7—C10—N2106.04 (17)
N3—N2—C10112.34 (16)N1—C11—C18121.53 (18)
C19—N2—C10120.02 (17)N1—C11—C12116.59 (18)
C8—N3—N2104.03 (16)C18—C11—C12121.88 (18)
C2—C1—C6122.9 (2)C17—C12—C13118.5 (2)
C2—C1—H1118.6C17—C12—C11119.43 (19)
C6—C1—H1118.6C13—C12—C11122.08 (19)
C1—C2—C3118.7 (2)C14—C13—C12120.6 (2)
C1—C2—H2120.6C14—C13—H13119.7
C3—C2—H2120.6C12—C13—H13119.7
C4—C3—C2121.3 (2)C15—C14—C13118.8 (2)
C4—C3—Cl1119.35 (19)C15—C14—H14120.6
C2—C3—Cl1119.35 (19)C13—C14—H14120.6
C3—C4—C5118.8 (2)C14—C15—F4119.3 (2)
C3—C4—H4120.6C14—C15—C16122.7 (2)
C5—C4—H4120.6F4—C15—C16118.0 (2)
C4—C5—C6122.00 (19)C15—C16—C17118.2 (2)
C4—C5—Cl2117.68 (16)C15—C16—H16120.9
C6—C5—Cl2120.28 (16)C17—C16—H16120.9
C1—C6—C5116.20 (19)C16—C17—C12121.2 (2)
C1—C6—C7118.89 (18)C16—C17—H17119.4
C5—C6—C7124.89 (18)C12—C17—H17119.4
C10—C7—C8104.67 (18)C19—C18—C11119.89 (19)
C10—C7—C6123.92 (18)C19—C18—H18120.1
C8—C7—C6131.06 (18)C11—C18—H18120.1
N3—C8—C7112.92 (18)C18—C19—N2118.42 (19)
N3—C8—C9118.01 (19)C18—C19—C20123.09 (19)
C7—C8—C9129.0 (2)N2—C19—C20118.45 (18)
C8—C9—H9A109.5F1—C20—F3107.1 (2)
C8—C9—H9B109.5F1—C20—F2106.34 (19)
H9A—C9—H9B109.5F3—C20—F2107.4 (2)
C8—C9—H9C109.5F1—C20—C19112.21 (19)
H9A—C9—H9C109.5F3—C20—C19110.62 (18)
H9B—C9—H9C109.5F2—C20—C19112.9 (2)
N1—C10—C7131.82 (19)
C19—N2—N3—C8179.8 (2)N3—N2—C10—C70.4 (2)
C10—N2—N3—C80.0 (2)C19—N2—C10—C7−179.44 (19)
C6—C1—C2—C30.5 (4)C10—N1—C11—C18−1.4 (3)
C1—C2—C3—C41.3 (4)C10—N1—C11—C12178.00 (18)
C1—C2—C3—Cl1−178.8 (2)N1—C11—C12—C17−10.3 (3)
C2—C3—C4—C5−1.0 (4)C18—C11—C12—C17169.2 (2)
Cl1—C3—C4—C5179.13 (19)N1—C11—C12—C13170.2 (2)
C3—C4—C5—C6−1.1 (4)C18—C11—C12—C13−10.3 (3)
C3—C4—C5—Cl2176.46 (19)C17—C12—C13—C14−0.3 (4)
C2—C1—C6—C5−2.4 (4)C11—C12—C13—C14179.2 (2)
C2—C1—C6—C7178.6 (2)C12—C13—C14—C15−0.8 (4)
C4—C5—C6—C12.7 (3)C13—C14—C15—F4−179.7 (3)
Cl2—C5—C6—C1−174.81 (17)C13—C14—C15—C161.4 (5)
C4—C5—C6—C7−178.3 (2)C14—C15—C16—C17−0.9 (4)
Cl2—C5—C6—C74.2 (3)F4—C15—C16—C17−179.8 (2)
C1—C6—C7—C1046.2 (3)C15—C16—C17—C12−0.2 (4)
C5—C6—C7—C10−132.7 (2)C13—C12—C17—C160.8 (4)
C1—C6—C7—C8−125.9 (3)C11—C12—C17—C16−178.7 (2)
C5—C6—C7—C855.2 (3)N1—C11—C18—C190.4 (3)
N2—N3—C8—C7−0.4 (2)C12—C11—C18—C19−179.0 (2)
N2—N3—C8—C9177.5 (2)C11—C18—C19—N20.9 (3)
C10—C7—C8—N30.6 (3)C11—C18—C19—C20−176.8 (2)
C6—C7—C8—N3173.9 (2)N3—N2—C19—C18179.1 (2)
C10—C7—C8—C9−177.0 (2)C10—N2—C19—C18−1.1 (3)
C6—C7—C8—C9−3.8 (4)N3—N2—C19—C20−3.2 (3)
C11—N1—C10—C7−179.4 (2)C10—N2—C19—C20176.65 (19)
C11—N1—C10—N21.2 (3)C18—C19—C20—F1115.6 (2)
C8—C7—C10—N1−180.0 (2)N2—C19—C20—F1−62.1 (3)
C6—C7—C10—N16.1 (4)C18—C19—C20—F3−3.9 (3)
C8—C7—C10—N2−0.6 (2)N2—C19—C20—F3178.4 (2)
C6—C7—C10—N2−174.44 (19)C18—C19—C20—F2−124.3 (2)
N3—N2—C10—N1179.88 (19)N2—C19—C20—F258.1 (3)
C19—N2—C10—N10.0 (3)
  7 in total

1.  Optimization of a pyrazolo[1,5-a]pyrimidine class of KDR kinase inhibitors: improvements in physical properties enhance cellular activity and pharmacokinetics.

Authors:  Mark E Fraley; Robert S Rubino; William F Hoffman; Scott R Hambaugh; Kenneth L Arrington; Randall W Hungate; Mark T Bilodeau; Andrew J Tebben; Ruth Z Rutledge; Richard L Kendall; Rosemary C McFall; William R Huckle; Kathleen E Coll; Kenneth A Thomas
Journal:  Bioorg Med Chem Lett       Date:  2002-12-16       Impact factor: 2.823

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Synthesis and biological evaluations of condensed pyridine and condensed pyrimidine-based HMG-CoA reductase inhibitors.

Authors:  M Suzuki; H Iwasaki; Y Fujikawa; M Sakashita; M Kitahara; R Sakoda
Journal:  Bioorg Med Chem Lett       Date:  2001-05-21       Impact factor: 2.823

4.  Synthesis and antischistosomal activity of certain pyrazolo[1,5-a]pyrimidines.

Authors:  K Senga; T Novinson; H R Wilson; R K Robins
Journal:  J Med Chem       Date:  1981-05       Impact factor: 7.446

5.  Novel heterocyclic nitrofurfural hydrazones. In vivo antirypanosomal activity.

Authors:  T Novinsion; B Bhooshan; T Okabe; G R Revankar; R K Robins; K Senga; H R Wilson
Journal:  J Med Chem       Date:  1976-04       Impact factor: 7.446

6.  The nature of halogen...halogen interactions: a model derived from experimental charge-density analysis.

Authors:  Thai Thanh Thu Bui; Slimane Dahaoui; Claude Lecomte; Gautam R Desiraju; Enrique Espinosa
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

7.  1-(2,4-Dichloro-phen-yl)-5-(2-nitro-anilino)-1H-pyrazole-4-carbonitrile.

Authors:  Ju Liu; Zhi-Qiang Cai; Yang Wang; Chun-Yan Li; Li-Feng Xu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-24
  7 in total
  1 in total

1.  3-(2,4-Dichloro-phen-yl)-5-(4-fluoro-phen-yl)-2-phenyl-7-(trifluoro-meth-yl)pyrazolo-[1,5-a]pyrimidine.

Authors:  Ju Liu; Zhi-Qiang Cai; Yang Wang; Yu-Li Sang; Li-Feng Xu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-31
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.