| Literature DB >> 22590242 |
Ali A El-Emam, Mohamed A Al-Omar, Hazem A Ghabbour, Hoong-Kun Fun, Tze Shyang Chia.
Abstract
In the title compound, C(14)H(13)N(3)OS(2), the thio-phene ring is disordered over two orientations by ca 180° about the C-C bond axis linking the ring to the rest of the mol-ecule, with a site-occupancy ratio of 0.651 (5):0.349 (5). The central 1,3,4-oxadiazole-2(3H)-thione ring forms dihedral angles of 9.2 (5), 4.6 (11) and 47.70 (7)° with the major and minor parts of the disordered thio-phene ring and the terminal phenyl ring, respectively. In the crystal, no significant inter-molecular hydrogen bonds are observed. The crystal packing is stabilized by π-π inter-actions [centroid-centroid distance = 3.589 (2) Å].Entities:
Year: 2012 PMID: 22590242 PMCID: PMC3344480 DOI: 10.1107/S1600536812014419
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C14H13N3OS2 | |
| Monoclinic, | Cu |
| Hall symbol: -P 2yn | Cell parameters from 587 reflections |
| θ = 4.0–45.3° | |
| µ = 3.32 mm−1 | |
| β = 108.072 (6)° | Needle, colorless |
| 0.92 × 0.16 × 0.09 mm | |
| Bruker SMART APEXII CCD area-detector diffractometer | 2676 independent reflections |
| Radiation source: fine-focus sealed tube | 1516 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 69.5°, θmin = 4.0° |
| Absorption correction: multi-scan ( | |
| 10021 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 2676 reflections | Δρmax = 0.16 e Å−3 |
| 220 parameters | Δρmin = −0.20 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0019 (4) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| S2 | 0.86759 (10) | 0.22270 (15) | 1.02672 (6) | 0.0941 (4) | |
| O1 | 0.6522 (2) | 0.3191 (3) | 0.93576 (13) | 0.0697 (6) | |
| N1 | 0.6491 (2) | 0.2726 (3) | 0.80711 (15) | 0.0627 (7) | |
| N2 | 0.7564 (2) | 0.2228 (3) | 0.86200 (15) | 0.0628 (6) | |
| N3 | 0.8999 (2) | 0.2802 (4) | 0.79288 (16) | 0.0707 (7) | |
| C1 | 0.7617 (3) | 0.2516 (4) | 0.94048 (19) | 0.0672 (8) | |
| C2 | 0.5908 (3) | 0.3288 (4) | 0.85393 (19) | 0.0620 (8) | |
| C3 | 0.4743 (3) | 0.4013 (4) | 0.8291 (2) | 0.0651 (8) | |
| C4 | 0.413 (2) | 0.451 (3) | 0.8829 (15) | 0.093 (8) | 0.651 (5) |
| H4A | 0.4370 | 0.4340 | 0.9396 | 0.111* | 0.651 (5) |
| C5 | 0.2989 (18) | 0.542 (3) | 0.8296 (11) | 0.083 (5) | 0.651 (5) |
| H5A | 0.2436 | 0.5951 | 0.8503 | 0.100* | 0.651 (5) |
| C6 | 0.2904 (15) | 0.533 (2) | 0.7508 (13) | 0.092 (5) | 0.651 (5) |
| H6A | 0.2254 | 0.5768 | 0.7096 | 0.110* | 0.651 (5) |
| S1 | 0.4025 (5) | 0.4400 (7) | 0.7304 (4) | 0.0799 (9) | 0.651 (5) |
| S1A | 0.4022 (12) | 0.4715 (16) | 0.8908 (8) | 0.0785 (19) | 0.349 (5) |
| C6A | 0.293 (3) | 0.522 (6) | 0.825 (3) | 0.125 (17) | 0.349 (5) |
| H6AA | 0.2263 | 0.5592 | 0.8375 | 0.150* | 0.349 (5) |
| C5A | 0.292 (3) | 0.512 (4) | 0.745 (2) | 0.112 (13) | 0.349 (5) |
| H5AA | 0.2322 | 0.5508 | 0.6995 | 0.135* | 0.349 (5) |
| C4A | 0.416 (3) | 0.420 (5) | 0.745 (2) | 0.090 (13) | 0.349 (5) |
| H4AA | 0.4405 | 0.3878 | 0.7008 | 0.108* | 0.349 (5) |
| C7 | 0.8480 (3) | 0.1488 (4) | 0.83120 (19) | 0.0694 (8) | |
| H7A | 0.9088 | 0.0953 | 0.8767 | 0.083* | |
| H7B | 0.8143 | 0.0545 | 0.7918 | 0.083* | |
| C8 | 0.9964 (3) | 0.3838 (6) | 0.8467 (2) | 0.0919 (12) | |
| H8A | 0.9945 | 0.5035 | 0.8255 | 0.138* | |
| H8B | 1.0697 | 0.3280 | 0.8492 | 0.138* | |
| H8C | 0.9887 | 0.3883 | 0.9010 | 0.138* | |
| C9 | 0.8762 (3) | 0.2882 (4) | 0.70804 (19) | 0.0638 (8) | |
| C10 | 0.9562 (3) | 0.3627 (4) | 0.6735 (2) | 0.0806 (10) | |
| H10A | 1.0280 | 0.4050 | 0.7073 | 0.097* | |
| C11 | 0.9293 (5) | 0.3740 (6) | 0.5890 (3) | 0.1074 (15) | |
| H11A | 0.9838 | 0.4249 | 0.5669 | 0.129* | |
| C12 | 0.8256 (6) | 0.3131 (7) | 0.5371 (3) | 0.1167 (17) | |
| H12A | 0.8090 | 0.3218 | 0.4803 | 0.140* | |
| C13 | 0.7459 (4) | 0.2383 (5) | 0.5709 (3) | 0.0997 (14) | |
| H13A | 0.6744 | 0.1965 | 0.5363 | 0.120* | |
| C14 | 0.7697 (3) | 0.2240 (4) | 0.6550 (2) | 0.0766 (9) | |
| H14A | 0.7150 | 0.1717 | 0.6764 | 0.092* |
| S2 | 0.0998 (8) | 0.1138 (8) | 0.0625 (6) | 0.0053 (5) | 0.0162 (5) | −0.0036 (5) |
| O1 | 0.0771 (16) | 0.0794 (14) | 0.0594 (13) | −0.0076 (10) | 0.0311 (12) | −0.0051 (9) |
| N1 | 0.0636 (17) | 0.0670 (14) | 0.0627 (15) | −0.0058 (12) | 0.0270 (14) | −0.0015 (11) |
| N2 | 0.0631 (18) | 0.0750 (15) | 0.0545 (14) | −0.0025 (12) | 0.0245 (14) | −0.0021 (11) |
| N3 | 0.0626 (17) | 0.0918 (18) | 0.0619 (16) | −0.0176 (12) | 0.0255 (14) | −0.0119 (13) |
| C1 | 0.071 (2) | 0.0719 (19) | 0.0627 (19) | −0.0063 (14) | 0.0268 (18) | −0.0024 (13) |
| C2 | 0.068 (2) | 0.0644 (18) | 0.0607 (18) | −0.0118 (14) | 0.0297 (17) | −0.0054 (13) |
| C3 | 0.063 (2) | 0.0739 (19) | 0.065 (2) | −0.0117 (14) | 0.030 (2) | −0.0079 (15) |
| C4 | 0.076 (11) | 0.096 (9) | 0.093 (13) | −0.001 (6) | 0.010 (8) | −0.011 (6) |
| C5 | 0.092 (12) | 0.080 (6) | 0.099 (9) | −0.013 (5) | 0.059 (9) | −0.012 (5) |
| C6 | 0.067 (9) | 0.082 (6) | 0.105 (11) | 0.002 (5) | −0.002 (7) | 0.002 (6) |
| S1 | 0.071 (2) | 0.1025 (17) | 0.0634 (11) | −0.0140 (14) | 0.0171 (11) | −0.0039 (14) |
| S1A | 0.082 (4) | 0.087 (3) | 0.082 (3) | −0.006 (3) | 0.049 (3) | −0.006 (3) |
| C6A | 0.044 (17) | 0.13 (3) | 0.20 (3) | 0.002 (14) | 0.03 (2) | −0.03 (2) |
| C5A | 0.077 (18) | 0.18 (3) | 0.09 (2) | −0.040 (14) | 0.050 (15) | 0.024 (17) |
| C4A | 0.044 (12) | 0.130 (18) | 0.11 (3) | 0.011 (9) | 0.041 (15) | 0.031 (12) |
| C7 | 0.070 (2) | 0.0747 (19) | 0.067 (2) | 0.0020 (15) | 0.0258 (17) | 0.0004 (15) |
| C8 | 0.077 (3) | 0.115 (3) | 0.080 (2) | −0.026 (2) | 0.020 (2) | −0.016 (2) |
| C9 | 0.065 (2) | 0.0672 (17) | 0.0646 (19) | 0.0082 (14) | 0.0283 (17) | −0.0042 (13) |
| C10 | 0.088 (3) | 0.078 (2) | 0.090 (3) | 0.0077 (17) | 0.048 (2) | 0.0057 (17) |
| C11 | 0.147 (4) | 0.096 (3) | 0.109 (4) | 0.034 (3) | 0.082 (3) | 0.026 (3) |
| C12 | 0.175 (5) | 0.110 (4) | 0.072 (3) | 0.050 (3) | 0.049 (3) | 0.013 (2) |
| C13 | 0.117 (4) | 0.099 (3) | 0.072 (2) | 0.027 (2) | 0.014 (3) | −0.010 (2) |
| C14 | 0.080 (2) | 0.080 (2) | 0.070 (2) | 0.0079 (17) | 0.024 (2) | −0.0098 (16) |
| S2—C1 | 1.632 (3) | C6A—C5A | 1.35 (6) |
| O1—C2 | 1.364 (3) | C6A—H6AA | 0.9300 |
| O1—C1 | 1.382 (4) | C5A—C4A | 1.63 (5) |
| N1—C2 | 1.283 (4) | C5A—H5AA | 0.9300 |
| N1—N2 | 1.385 (3) | C4A—H4AA | 0.9300 |
| N2—C1 | 1.339 (4) | C7—H7A | 0.9700 |
| N2—C7 | 1.464 (4) | C7—H7B | 0.9700 |
| N3—C9 | 1.388 (4) | C8—H8A | 0.9600 |
| N3—C7 | 1.423 (4) | C8—H8B | 0.9600 |
| N3—C8 | 1.455 (4) | C8—H8C | 0.9600 |
| C2—C3 | 1.432 (4) | C9—C10 | 1.386 (4) |
| C3—C4 | 1.388 (19) | C9—C14 | 1.400 (5) |
| C3—C4A | 1.39 (3) | C10—C11 | 1.379 (5) |
| C3—S1A | 1.641 (12) | C10—H10A | 0.9300 |
| C3—S1 | 1.663 (6) | C11—C12 | 1.360 (6) |
| C4—C5 | 1.55 (3) | C11—H11A | 0.9300 |
| C4—H4A | 0.9300 | C12—C13 | 1.377 (6) |
| C5—C6 | 1.32 (3) | C12—H12A | 0.9300 |
| C5—H5A | 0.9300 | C13—C14 | 1.378 (5) |
| C6—S1 | 1.641 (19) | C13—H13A | 0.9300 |
| C6—H6A | 0.9300 | C14—H14A | 0.9300 |
| S1A—C6A | 1.49 (5) | ||
| C2—O1—C1 | 106.2 (2) | C6A—C5A—C4A | 107 (3) |
| C2—N1—N2 | 103.6 (2) | C6A—C5A—H5AA | 126.3 |
| C1—N2—N1 | 112.3 (3) | C4A—C5A—H5AA | 126.3 |
| C1—N2—C7 | 127.7 (3) | C3—C4A—C5A | 102 (2) |
| N1—N2—C7 | 119.9 (2) | C3—C4A—H4AA | 128.9 |
| C9—N3—C7 | 122.2 (3) | C5A—C4A—H4AA | 128.9 |
| C9—N3—C8 | 120.1 (3) | N3—C7—N2 | 112.9 (3) |
| C7—N3—C8 | 116.7 (3) | N3—C7—H7A | 109.0 |
| N2—C1—O1 | 104.5 (3) | N2—C7—H7A | 109.0 |
| N2—C1—S2 | 131.6 (3) | N3—C7—H7B | 109.0 |
| O1—C1—S2 | 123.9 (2) | N2—C7—H7B | 109.0 |
| N1—C2—O1 | 113.4 (3) | H7A—C7—H7B | 107.8 |
| N1—C2—C3 | 127.3 (3) | N3—C8—H8A | 109.5 |
| O1—C2—C3 | 119.3 (3) | N3—C8—H8B | 109.5 |
| C4—C3—C4A | 116.9 (19) | H8A—C8—H8B | 109.5 |
| C4—C3—C2 | 124.6 (12) | N3—C8—H8C | 109.5 |
| C4A—C3—C2 | 118.5 (15) | H8A—C8—H8C | 109.5 |
| C4A—C3—S1A | 115.5 (15) | H8B—C8—H8C | 109.5 |
| C2—C3—S1A | 126.0 (6) | C10—C9—N3 | 121.1 (3) |
| C4—C3—S1 | 114.3 (12) | C10—C9—C14 | 118.1 (3) |
| C2—C3—S1 | 121.0 (3) | N3—C9—C14 | 120.7 (3) |
| S1A—C3—S1 | 112.7 (6) | C11—C10—C9 | 120.1 (4) |
| C3—C4—C5 | 106.2 (16) | C11—C10—H10A | 119.9 |
| C3—C4—H4A | 126.9 | C9—C10—H10A | 119.9 |
| C5—C4—H4A | 126.9 | C12—C11—C10 | 122.1 (4) |
| C6—C5—C4 | 110.7 (15) | C12—C11—H11A | 119.0 |
| C6—C5—H5A | 124.7 | C10—C11—H11A | 119.0 |
| C4—C5—H5A | 124.7 | C11—C12—C13 | 118.2 (4) |
| C5—C6—S1 | 115.3 (13) | C11—C12—H12A | 120.9 |
| C5—C6—H6A | 122.4 | C13—C12—H12A | 120.9 |
| S1—C6—H6A | 122.4 | C12—C13—C14 | 121.4 (5) |
| C6—S1—C3 | 93.3 (8) | C12—C13—H13A | 119.3 |
| C6A—S1A—C3 | 96.2 (18) | C14—C13—H13A | 119.3 |
| C5A—C6A—S1A | 118 (3) | C13—C14—C9 | 120.1 (4) |
| C5A—C6A—H6AA | 120.8 | C13—C14—H14A | 120.0 |
| S1A—C6A—H6AA | 120.8 | C9—C14—H14A | 120.0 |
| C2—N1—N2—C1 | −0.7 (3) | C2—C3—S1—C6 | −175.1 (6) |
| C2—N1—N2—C7 | 179.4 (2) | S1A—C3—S1—C6 | −0.3 (8) |
| N1—N2—C1—O1 | 1.3 (3) | C4A—C3—S1A—C6A | 3 (3) |
| C7—N2—C1—O1 | −178.9 (3) | C2—C3—S1A—C6A | −179.0 (19) |
| N1—N2—C1—S2 | −177.7 (2) | S1—C3—S1A—C6A | 6 (2) |
| C7—N2—C1—S2 | 2.1 (5) | C3—S1A—C6A—C5A | −6 (4) |
| C2—O1—C1—N2 | −1.3 (3) | S1A—C6A—C5A—C4A | 7 (5) |
| C2—O1—C1—S2 | 177.8 (2) | C4—C3—C4A—C5A | 4 (3) |
| N2—N1—C2—O1 | −0.2 (3) | C2—C3—C4A—C5A | −177.8 (14) |
| N2—N1—C2—C3 | 178.2 (3) | S1A—C3—C4A—C5A | 1 (3) |
| C1—O1—C2—N1 | 1.0 (3) | S1—C3—C4A—C5A | −52 (19) |
| C1—O1—C2—C3 | −177.6 (3) | C6A—C5A—C4A—C3 | −4 (4) |
| N1—C2—C3—C4 | 176.5 (11) | C9—N3—C7—N2 | −106.3 (3) |
| O1—C2—C3—C4 | −5.2 (11) | C8—N3—C7—N2 | 85.5 (4) |
| N1—C2—C3—C4A | −2.0 (17) | C1—N2—C7—N3 | −107.6 (3) |
| O1—C2—C3—C4A | 176.4 (17) | N1—N2—C7—N3 | 72.2 (3) |
| N1—C2—C3—S1A | 179.8 (5) | C7—N3—C9—C10 | −154.3 (3) |
| O1—C2—C3—S1A | −1.9 (6) | C8—N3—C9—C10 | 13.5 (4) |
| N1—C2—C3—S1 | −6.1 (5) | C7—N3—C9—C14 | 26.8 (4) |
| O1—C2—C3—S1 | 172.2 (3) | C8—N3—C9—C14 | −165.3 (3) |
| C4A—C3—C4—C5 | −8 (2) | N3—C9—C10—C11 | −178.1 (3) |
| C2—C3—C4—C5 | 173.5 (10) | C14—C9—C10—C11 | 0.8 (5) |
| S1A—C3—C4—C5 | 55 (29) | C9—C10—C11—C12 | −0.3 (6) |
| S1—C3—C4—C5 | −4.1 (17) | C10—C11—C12—C13 | 0.1 (6) |
| C3—C4—C5—C6 | 4 (2) | C11—C12—C13—C14 | −0.3 (6) |
| C4—C5—C6—S1 | −3 (2) | C12—C13—C14—C9 | 0.8 (5) |
| C5—C6—S1—C3 | 0.2 (15) | C10—C9—C14—C13 | −1.0 (5) |
| C4—C3—S1—C6 | 2.6 (12) | N3—C9—C14—C13 | 177.9 (3) |
| C4A—C3—S1—C6 | 129 (20) |