| Literature DB >> 23723844 |
Ali A El-Emam1, Mohamed A Al-Omar, Abdul-Rahman M Al-Obaid, Seik Weng Ng, Edward R T Tiekink.
Abstract
In the title compound, C17H18N4OS2, the 2-thienyl ring is disordered over two co-planar, opposite orientations in a 0.684 (2): 0.316 ratio. The 1,3,4-oxa-diazole ring is almost co-planar with the attached 2-thienyl ring [dihedral angles of 5.34 (19) and 4.8 (5)° for the major and minor components, respectively]. The relative disposition of the thione- and ring-S atoms is anti for the major orientation of the 2-thienyl residue. Overall, the shape of the mol-ecule approximates the letter V. In the crystal, a three-dimensional architecture is consolidated by a combination of weak C-H⋯S and C-H⋯π contacts.Entities:
Year: 2013 PMID: 23723844 PMCID: PMC3647878 DOI: 10.1107/S1600536813009252
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C17H18N4OS2 | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 2605 reflections |
| θ = 3.1–27.5° | |
| µ = 0.31 mm−1 | |
| β = 97.802 (6)° | Prism, light-brown |
| 0.40 × 0.30 × 0.20 mm | |
| Agilent SuperNova Dual diffractometer with Atlas detector | 4083 independent reflections |
| Radiation source: SuperNova (Mo) X-ray Source | 2797 reflections with |
| Mirror monochromator | |
| Detector resolution: 10.4041 pixels mm-1 | θmax = 27.6°, θmin = 3.1° |
| ω scan | |
| Absorption correction: multi-scan ( | |
| 9546 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4083 reflections | (Δ/σ)max = 0.001 |
| 230 parameters | Δρmax = 0.25 e Å−3 |
| 33 restraints | Δρmin = −0.26 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| S1 | 0.51012 (6) | 0.4713 (3) | 0.35472 (6) | 0.0619 (3) | 0.684 (2) |
| S1' | 0.51936 (13) | 0.8668 (6) | 0.43201 (16) | 0.0619 (3) | 0.316 |
| S2 | 0.35703 (2) | 0.65396 (10) | 0.54603 (3) | 0.0727 (2) | |
| O1 | 0.43151 (5) | 0.6708 (2) | 0.47998 (5) | 0.0534 (3) | |
| N1 | 0.41826 (6) | 0.3583 (3) | 0.42460 (7) | 0.0522 (4) | |
| N2 | 0.38163 (6) | 0.3737 (3) | 0.46156 (7) | 0.0509 (4) | |
| N3 | 0.29660 (6) | 0.2250 (3) | 0.41864 (7) | 0.0556 (4) | |
| N4 | 0.22283 (6) | 0.3760 (2) | 0.32601 (6) | 0.0489 (4) | |
| C1 | 0.55629 (17) | 0.6849 (7) | 0.3488 (3) | 0.0629 (13) | 0.684 (2) |
| H1 | 0.5786 | 0.6799 | 0.3215 | 0.076* | 0.684 (2) |
| C2 | 0.5569 (3) | 0.8585 (13) | 0.3874 (2) | 0.0655 (13) | 0.684 (2) |
| H2 | 0.5783 | 0.9889 | 0.3899 | 0.079* | 0.684 (2) |
| C3 | 0.5214 (2) | 0.8105 (7) | 0.4216 (2) | 0.0673 (14) | 0.684 (2) |
| H3 | 0.5180 | 0.9064 | 0.4526 | 0.081* | 0.684 (2) |
| C1' | 0.5583 (6) | 0.821 (3) | 0.3787 (6) | 0.0629 (13) | 0.316 (2) |
| H1' | 0.5844 | 0.9250 | 0.3726 | 0.076* | 0.316 (2) |
| C2' | 0.5483 (5) | 0.627 (2) | 0.3469 (7) | 0.0655 (13) | 0.316 (2) |
| H2' | 0.5649 | 0.5826 | 0.3163 | 0.079* | 0.316 (2) |
| C3' | 0.5102 (5) | 0.509 (2) | 0.3670 (6) | 0.0673 (14) | 0.316 (2) |
| H3' | 0.4984 | 0.3649 | 0.3524 | 0.081* | 0.316 (2) |
| C4 | 0.49000 (7) | 0.6179 (3) | 0.41049 (8) | 0.0506 (4) | |
| C5 | 0.44667 (7) | 0.5396 (3) | 0.43703 (8) | 0.0481 (4) | |
| C6 | 0.38888 (7) | 0.5603 (3) | 0.49568 (8) | 0.0524 (5) | |
| C7 | 0.34040 (8) | 0.1950 (3) | 0.46076 (10) | 0.0613 (5) | |
| H7A | 0.3554 | 0.0431 | 0.4552 | 0.074* | |
| H7B | 0.3287 | 0.1934 | 0.4979 | 0.074* | |
| C8 | 0.26756 (8) | 0.4377 (4) | 0.42299 (9) | 0.0685 (6) | |
| H8A | 0.2869 | 0.5698 | 0.4115 | 0.082* | |
| H8B | 0.2619 | 0.4616 | 0.4622 | 0.082* | |
| C9 | 0.21648 (8) | 0.4220 (5) | 0.38539 (9) | 0.0721 (6) | |
| H9A | 0.1961 | 0.2980 | 0.3991 | 0.086* | |
| H9B | 0.1978 | 0.5675 | 0.3876 | 0.086* | |
| C10 | 0.25448 (8) | 0.1688 (3) | 0.32178 (10) | 0.0628 (5) | |
| H10A | 0.2608 | 0.1490 | 0.2827 | 0.075* | |
| H10B | 0.2362 | 0.0320 | 0.3325 | 0.075* | |
| C11 | 0.30534 (8) | 0.1901 (4) | 0.36017 (9) | 0.0632 (6) | |
| H11A | 0.3255 | 0.0493 | 0.3575 | 0.076* | |
| H11B | 0.3247 | 0.3209 | 0.3480 | 0.076* | |
| C12 | 0.17704 (7) | 0.3921 (3) | 0.28724 (8) | 0.0473 (4) | |
| C13 | 0.14489 (8) | 0.5860 (3) | 0.28800 (9) | 0.0573 (5) | |
| H13 | 0.1536 | 0.7033 | 0.3147 | 0.069* | |
| C14 | 0.10056 (9) | 0.6071 (4) | 0.25001 (10) | 0.0654 (6) | |
| H14 | 0.0799 | 0.7384 | 0.2515 | 0.078* | |
| C15 | 0.08620 (9) | 0.4380 (4) | 0.20978 (10) | 0.0670 (6) | |
| H15 | 0.0560 | 0.4528 | 0.1843 | 0.080* | |
| C16 | 0.11754 (9) | 0.2471 (4) | 0.20823 (9) | 0.0658 (6) | |
| H16 | 0.1085 | 0.1314 | 0.1812 | 0.079* | |
| C17 | 0.16222 (8) | 0.2226 (3) | 0.24588 (9) | 0.0579 (5) | |
| H17 | 0.1828 | 0.0913 | 0.2437 | 0.069* |
| S1 | 0.0542 (5) | 0.0638 (7) | 0.0700 (7) | −0.0048 (4) | 0.0171 (5) | −0.0069 (5) |
| S1' | 0.0542 (5) | 0.0638 (7) | 0.0700 (7) | −0.0048 (4) | 0.0171 (5) | −0.0069 (5) |
| S2 | 0.0815 (4) | 0.0786 (4) | 0.0626 (4) | 0.0100 (3) | 0.0265 (3) | 0.0018 (3) |
| O1 | 0.0542 (8) | 0.0540 (7) | 0.0521 (8) | −0.0023 (6) | 0.0082 (6) | 0.0000 (6) |
| N1 | 0.0470 (9) | 0.0554 (9) | 0.0546 (10) | −0.0002 (7) | 0.0086 (7) | 0.0011 (7) |
| N2 | 0.0456 (9) | 0.0535 (8) | 0.0541 (9) | 0.0008 (7) | 0.0089 (7) | 0.0064 (7) |
| N3 | 0.0471 (9) | 0.0608 (9) | 0.0604 (10) | −0.0044 (8) | 0.0124 (8) | 0.0048 (8) |
| N4 | 0.0457 (8) | 0.0541 (8) | 0.0491 (9) | −0.0023 (7) | 0.0142 (7) | −0.0106 (7) |
| C1 | 0.052 (2) | 0.058 (3) | 0.083 (3) | −0.0088 (18) | 0.025 (2) | 0.003 (2) |
| C2 | 0.061 (2) | 0.062 (3) | 0.075 (3) | −0.0087 (19) | 0.015 (2) | 0.0010 (19) |
| C3 | 0.078 (3) | 0.056 (3) | 0.068 (3) | 0.006 (2) | 0.011 (2) | −0.0046 (19) |
| C1' | 0.052 (2) | 0.058 (3) | 0.083 (3) | −0.0088 (18) | 0.025 (2) | 0.003 (2) |
| C2' | 0.061 (2) | 0.062 (3) | 0.075 (3) | −0.0087 (19) | 0.015 (2) | 0.0010 (19) |
| C3' | 0.078 (3) | 0.056 (3) | 0.068 (3) | 0.006 (2) | 0.011 (2) | −0.0046 (19) |
| C4 | 0.0448 (10) | 0.0544 (10) | 0.0516 (11) | 0.0005 (8) | 0.0032 (8) | 0.0050 (8) |
| C5 | 0.0453 (10) | 0.0513 (10) | 0.0464 (10) | 0.0046 (8) | 0.0018 (8) | 0.0041 (8) |
| C6 | 0.0522 (11) | 0.0542 (10) | 0.0505 (11) | 0.0052 (9) | 0.0065 (9) | 0.0097 (9) |
| C7 | 0.0594 (13) | 0.0566 (11) | 0.0689 (14) | −0.0061 (10) | 0.0121 (10) | 0.0156 (10) |
| C8 | 0.0593 (13) | 0.0951 (15) | 0.0518 (12) | 0.0152 (12) | 0.0097 (10) | −0.0165 (11) |
| C9 | 0.0537 (12) | 0.1097 (17) | 0.0543 (13) | 0.0173 (12) | 0.0127 (10) | −0.0143 (12) |
| C10 | 0.0535 (12) | 0.0641 (12) | 0.0714 (14) | 0.0021 (10) | 0.0102 (10) | −0.0198 (10) |
| C11 | 0.0507 (12) | 0.0677 (12) | 0.0729 (15) | 0.0054 (10) | 0.0142 (10) | −0.0162 (10) |
| C12 | 0.0469 (10) | 0.0488 (9) | 0.0491 (10) | −0.0100 (8) | 0.0165 (8) | −0.0018 (8) |
| C13 | 0.0612 (12) | 0.0507 (10) | 0.0609 (13) | −0.0047 (10) | 0.0120 (10) | −0.0051 (9) |
| C14 | 0.0651 (14) | 0.0591 (12) | 0.0713 (15) | 0.0052 (10) | 0.0072 (11) | 0.0040 (11) |
| C15 | 0.0656 (14) | 0.0697 (13) | 0.0628 (14) | −0.0044 (11) | −0.0026 (11) | 0.0052 (11) |
| C16 | 0.0708 (14) | 0.0665 (13) | 0.0575 (13) | −0.0078 (11) | −0.0003 (11) | −0.0100 (10) |
| C17 | 0.0606 (12) | 0.0551 (10) | 0.0585 (12) | −0.0020 (9) | 0.0098 (10) | −0.0077 (9) |
| S1—C4 | 1.708 (2) | C3'—C4 | 1.371 (9) |
| S1—C1 | 1.738 (3) | C3'—H3' | 0.9300 |
| S1'—C4 | 1.666 (3) | C4—C5 | 1.441 (3) |
| S1'—C1' | 1.748 (9) | C7—H7A | 0.9700 |
| S2—C6 | 1.636 (2) | C7—H7B | 0.9700 |
| O1—C5 | 1.367 (2) | C8—C9 | 1.505 (3) |
| O1—C6 | 1.377 (2) | C8—H8A | 0.9700 |
| N1—C5 | 1.288 (2) | C8—H8B | 0.9700 |
| N1—N2 | 1.386 (2) | C9—H9A | 0.9700 |
| N2—C6 | 1.338 (2) | C9—H9B | 0.9700 |
| N2—C7 | 1.485 (2) | C10—C11 | 1.512 (3) |
| N3—C7 | 1.425 (3) | C10—H10A | 0.9700 |
| N3—C8 | 1.447 (3) | C10—H10B | 0.9700 |
| N3—C11 | 1.449 (3) | C11—H11A | 0.9700 |
| N4—C12 | 1.411 (2) | C11—H11B | 0.9700 |
| N4—C10 | 1.458 (2) | C12—C13 | 1.395 (3) |
| N4—C9 | 1.463 (2) | C12—C17 | 1.396 (3) |
| C1—C2 | 1.349 (5) | C13—C14 | 1.374 (3) |
| C1—H1 | 0.9300 | C13—H13 | 0.9300 |
| C2—C3 | 1.342 (7) | C14—C15 | 1.375 (3) |
| C2—H2 | 0.9300 | C14—H14 | 0.9300 |
| C3—C4 | 1.379 (5) | C15—C16 | 1.370 (3) |
| C3—H3 | 0.9300 | C15—H15 | 0.9300 |
| C1'—C2' | 1.349 (8) | C16—C17 | 1.379 (3) |
| C1'—H1' | 0.9300 | C16—H16 | 0.9300 |
| C2'—C3' | 1.344 (10) | C17—H17 | 0.9300 |
| C2'—H2' | 0.9300 | ||
| C4—S1—C1 | 90.4 (2) | N2—C7—H7A | 108.3 |
| C4—S1'—C1' | 86.7 (6) | N3—C7—H7B | 108.3 |
| C5—O1—C6 | 106.05 (14) | N2—C7—H7B | 108.3 |
| C5—N1—N2 | 103.39 (14) | H7A—C7—H7B | 107.4 |
| C6—N2—N1 | 112.28 (15) | N3—C8—C9 | 109.90 (18) |
| C6—N2—C7 | 126.94 (16) | N3—C8—H8A | 109.7 |
| N1—N2—C7 | 120.78 (15) | C9—C8—H8A | 109.7 |
| C7—N3—C8 | 115.60 (17) | N3—C8—H8B | 109.7 |
| C7—N3—C11 | 115.92 (16) | C9—C8—H8B | 109.7 |
| C8—N3—C11 | 109.70 (16) | H8A—C8—H8B | 108.2 |
| C12—N4—C10 | 116.68 (15) | N4—C9—C8 | 111.87 (16) |
| C12—N4—C9 | 114.66 (14) | N4—C9—H9A | 109.2 |
| C10—N4—C9 | 110.64 (17) | C8—C9—H9A | 109.2 |
| C2—C1—S1 | 114.1 (6) | N4—C9—H9B | 109.2 |
| C2—C1—H1 | 122.9 | C8—C9—H9B | 109.2 |
| S1—C1—H1 | 122.9 | H9A—C9—H9B | 107.9 |
| C3—C2—C1 | 108.2 (7) | N4—C10—C11 | 110.80 (16) |
| C3—C2—H2 | 125.9 | N4—C10—H10A | 109.5 |
| C1—C2—H2 | 125.9 | C11—C10—H10A | 109.5 |
| C2—C3—C4 | 119.4 (5) | N4—C10—H10B | 109.5 |
| C2—C3—H3 | 120.3 | C11—C10—H10B | 109.5 |
| C4—C3—H3 | 120.3 | H10A—C10—H10B | 108.1 |
| C2'—C1'—S1' | 115.9 (14) | N3—C11—C10 | 110.26 (16) |
| C2'—C1'—H1' | 122.0 | N3—C11—H11A | 109.6 |
| S1'—C1'—H1' | 122.0 | C10—C11—H11A | 109.6 |
| C3'—C2'—C1' | 108.4 (16) | N3—C11—H11B | 109.6 |
| C3'—C2'—H2' | 125.8 | C10—C11—H11B | 109.6 |
| C1'—C2'—H2' | 125.8 | H11A—C11—H11B | 108.1 |
| C2'—C3'—C4 | 114.7 (12) | C13—C12—C17 | 116.86 (19) |
| C2'—C3'—H3' | 122.7 | C13—C12—N4 | 120.30 (16) |
| C4—C3'—H3' | 122.7 | C17—C12—N4 | 122.82 (17) |
| C3'—C4—C3 | 103.2 (6) | C14—C13—C12 | 121.24 (19) |
| C3'—C4—C5 | 126.4 (6) | C14—C13—H13 | 119.4 |
| C3—C4—C5 | 130.4 (2) | C12—C13—H13 | 119.4 |
| C3'—C4—S1' | 114.2 (6) | C13—C14—C15 | 121.3 (2) |
| C5—C4—S1' | 119.33 (17) | C13—C14—H14 | 119.3 |
| C3—C4—S1 | 107.6 (2) | C15—C14—H14 | 119.3 |
| C5—C4—S1 | 121.91 (15) | C16—C15—C14 | 118.2 (2) |
| S1'—C4—S1 | 118.65 (15) | C16—C15—H15 | 120.9 |
| N1—C5—O1 | 113.36 (16) | C14—C15—H15 | 120.9 |
| N1—C5—C4 | 127.95 (17) | C15—C16—C17 | 121.5 (2) |
| O1—C5—C4 | 118.66 (16) | C15—C16—H16 | 119.3 |
| N2—C6—O1 | 104.91 (15) | C17—C16—H16 | 119.3 |
| N2—C6—S2 | 131.15 (15) | C16—C17—C12 | 120.94 (19) |
| O1—C6—S2 | 123.94 (15) | C16—C17—H17 | 119.5 |
| N3—C7—N2 | 116.10 (15) | C12—C17—H17 | 119.5 |
| N3—C7—H7A | 108.3 | ||
| C5—N1—N2—C6 | −0.7 (2) | S1'—C4—C5—O1 | −1.2 (3) |
| C5—N1—N2—C7 | 179.54 (16) | S1—C4—C5—O1 | −177.46 (15) |
| C4—S1—C1—C2 | 0.5 (3) | N1—N2—C6—O1 | 0.5 (2) |
| S1—C1—C2—C3 | 1.9 (5) | C7—N2—C6—O1 | −179.85 (16) |
| C1—C2—C3—C4 | −4.4 (7) | N1—N2—C6—S2 | −179.55 (15) |
| C4—S1'—C1'—C2' | 0.4 (9) | C7—N2—C6—S2 | 0.1 (3) |
| S1'—C1'—C2'—C3' | −2.3 (13) | C5—O1—C6—N2 | −0.01 (18) |
| C1'—C2'—C3'—C4 | 3.5 (16) | C5—O1—C6—S2 | −179.99 (14) |
| C2'—C3'—C4—C3 | −5.5 (13) | C8—N3—C7—N2 | −61.8 (2) |
| C2'—C3'—C4—C5 | 175.2 (9) | C11—N3—C7—N2 | 68.7 (2) |
| C2'—C3'—C4—S1' | −3.4 (17) | C6—N2—C7—N3 | 97.8 (2) |
| C2'—C3'—C4—S1 | 152 (10) | N1—N2—C7—N3 | −82.5 (2) |
| C2—C3—C4—C3' | 6.7 (7) | C7—N3—C8—C9 | −166.94 (17) |
| C2—C3—C4—C5 | −174.1 (4) | C11—N3—C8—C9 | 59.7 (2) |
| C2—C3—C4—S1' | −164 (2) | C12—N4—C9—C8 | −171.40 (17) |
| C2—C3—C4—S1 | 4.7 (7) | C10—N4—C9—C8 | 54.1 (2) |
| C1'—S1'—C4—C3' | 1.7 (11) | N3—C8—C9—N4 | −56.9 (3) |
| C1'—S1'—C4—C3 | 12 (2) | C12—N4—C10—C11 | 172.40 (16) |
| C1'—S1'—C4—C5 | −177.1 (6) | C9—N4—C10—C11 | −54.1 (2) |
| C1'—S1'—C4—S1 | −0.7 (6) | C7—N3—C11—C10 | 166.26 (16) |
| C1—S1—C4—C3' | −26 (9) | C8—N3—C11—C10 | −60.6 (2) |
| C1—S1—C4—C3 | −2.6 (4) | N4—C10—C11—N3 | 57.9 (2) |
| C1—S1—C4—C5 | 176.2 (2) | C10—N4—C12—C13 | −179.25 (17) |
| C1—S1—C4—S1' | −0.1 (3) | C9—N4—C12—C13 | 49.1 (2) |
| N2—N1—C5—O1 | 0.74 (19) | C10—N4—C12—C17 | −1.0 (2) |
| N2—N1—C5—C4 | −177.59 (17) | C9—N4—C12—C17 | −132.6 (2) |
| C6—O1—C5—N1 | −0.5 (2) | C17—C12—C13—C14 | 0.5 (3) |
| C6—O1—C5—C4 | 178.00 (15) | N4—C12—C13—C14 | 178.91 (17) |
| C3'—C4—C5—N1 | −1.5 (9) | C12—C13—C14—C15 | 0.0 (3) |
| C3—C4—C5—N1 | 179.4 (4) | C13—C14—C15—C16 | −0.4 (3) |
| S1'—C4—C5—N1 | 177.1 (2) | C14—C15—C16—C17 | 0.3 (3) |
| S1—C4—C5—N1 | 0.8 (3) | C15—C16—C17—C12 | 0.2 (3) |
| C3'—C4—C5—O1 | −179.8 (9) | C13—C12—C17—C16 | −0.6 (3) |
| C3—C4—C5—O1 | 1.1 (4) | N4—C12—C17—C16 | −178.96 (17) |
| H··· | ||||
| C9—H9 | 0.97 | 2.77 | 3.618 (3) | 146 |
| C1—H1··· | 0.93 | 2.72 | 3.545 (6) | 148 |
| C11—H11 | 0.97 | 2.98 | 3.600 (2) | 123 |
| C15—H15··· | 0.93 | 2.95 | 3.743 (3) | 144 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the O1,N1,N2,C5,C6 ring
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C9—H9 | 0.97 | 2.77 | 3.618 (3) | 146 |
| C1—H1⋯ | 0.93 | 2.72 | 3.545 (6) | 148 |
| C11—H11 | 0.97 | 2.98 | 3.600 (2) | 123 |
| C15—H15⋯ | 0.93 | 2.95 | 3.743 (3) | 144 |
Symmetry codes: (i) ; (ii) ; (iii) .