Literature DB >> 22589927

9-(4-Hy-droxy-3,5-dimeth-oxy-phen-yl)-3,3,6,6-tetra-methyl-3,4,5,6,7,9-hexa-hydro-1H-xanthene-1,8(2H)-dione.

V Sughanya1, N Sureshbabu.   

Abstract

In the title compound, C(25)H(30)O(6), the two fused cyclo-hexa-none rings have envelope conformations, whereas the central pyran ring is roughly planar [mximum deviation = 0.045 (2) Å]. The pyran and benzene rings are almost perpendicular to each other, making a dihedral angle of 86.32 (2)°. In the crystal, molecules are linked via pairs of O-H⋯O hydrogen bonds, forming inversion dimers.

Entities:  

Year:  2012        PMID: 22589927      PMCID: PMC3344018          DOI: 10.1107/S1600536812010410

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of xanthenes, see: Vang & Stankevich (1960 ▶); Hilderbrand & Weissleder (2007 ▶). For their pharmaceutical properties, see: Lambert et al. (1997 ▶); Poupelin et al. (1978 ▶); Hideo (1981 ▶); Selvanayagam et al. (1996 ▶); Jonathan et al. (1988 ▶). For related structures, see Mehdi et al. (2011 ▶); Odabasoglu et al. (2008 ▶). For the assignment of ring conformations, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C25H30O6 M = 426.49 Triclinic, a = 9.4268 (9) Å b = 10.2468 (10) Å c = 12.6122 (11) Å α = 84.973 (6)° β = 70.377 (5)° γ = 75.676 (6)° V = 1111.83 (18) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 295 K 0.30 × 0.25 × 0.20 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.924, T max = 0.982 20849 measured reflections 5233 independent reflections 2876 reflections with I > 2σ(I) R int = 0.052

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.157 S = 0.98 5233 reflections 288 parameters H-atom parameters constrained Δρmax = 0.28 e Å−3 Δρmin = −0.21 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2 and SAINT (Bruker, 2004 ▶); data reduction: SAINT and XPREP (Bruker, 2004 ▶); program(s) used to solve structure: SIR92 (Altomare et al., 1993 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812010410/im2356sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812010410/im2356Isup5.hkl Supplementary material file. DOI: 10.1107/S1600536812010410/im2356Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C25H30O6Z = 2
Mr = 426.49F(000) = 456
Triclinic, P1Dx = 1.274 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 9.4268 (9) ÅCell parameters from 5637 reflections
b = 10.2468 (10) Åθ = 2.4–27.5°
c = 12.6122 (11) ŵ = 0.09 mm1
α = 84.973 (6)°T = 295 K
β = 70.377 (5)°Block, colourless
γ = 75.676 (6)°0.30 × 0.25 × 0.20 mm
V = 1111.83 (18) Å3
Bruker Kappa APEXII CCD diffractometer5233 independent reflections
Radiation source: fine-focus sealed tube2876 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.052
ω and φ scanθmax = 28.3°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Bruker, 2004)h = −12→12
Tmin = 0.924, Tmax = 0.982k = −13→13
20849 measured reflectionsl = −16→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.051H-atom parameters constrained
wR(F2) = 0.157w = 1/[σ2(Fo2) + (0.0666P)2 + 0.3374P] where P = (Fo2 + 2Fc2)/3
S = 0.98(Δ/σ)max < 0.001
5233 reflectionsΔρmax = 0.28 e Å3
288 parametersΔρmin = −0.21 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.008 (2)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.2424 (2)0.1023 (2)0.33354 (14)0.0336 (5)
C20.1297 (3)0.0482 (2)0.30200 (15)0.0418 (5)
H2A0.03100.06570.36210.050*
H2B0.1666−0.04860.29230.050*
C30.1076 (3)0.1131 (2)0.19256 (16)0.0466 (6)
C40.2682 (3)0.0985 (3)0.10508 (16)0.0509 (6)
H4A0.30680.00520.08140.061*
H4B0.25770.15240.03980.061*
C50.3873 (2)0.1383 (2)0.14149 (15)0.0381 (5)
C60.3614 (2)0.1462 (2)0.26230 (14)0.0337 (5)
C70.4681 (2)0.2063 (2)0.29943 (14)0.0354 (5)
H70.57480.15610.26360.042*
C80.4297 (2)0.1905 (2)0.42567 (15)0.0367 (5)
C90.5320 (3)0.2232 (2)0.47906 (17)0.0471 (6)
C100.4874 (3)0.2148 (3)0.60591 (17)0.0525 (6)
H10A0.52320.28330.63150.063*
H10B0.54110.12790.62630.063*
C110.3143 (3)0.2328 (2)0.66833 (16)0.0451 (6)
C120.2551 (3)0.1381 (2)0.61580 (15)0.0427 (5)
H12A0.29150.04640.63830.051*
H12B0.14290.15980.64460.051*
C130.3068 (2)0.1463 (2)0.49008 (14)0.0349 (5)
C140.0234 (3)0.2601 (3)0.2129 (2)0.0638 (7)
H14A0.08340.30680.23750.096*
H14B−0.07580.26630.26980.096*
H14C0.00940.30020.14430.096*
C150.0135 (4)0.0391 (3)0.1523 (2)0.0787 (9)
H15A−0.08790.04880.20700.118*
H15B0.0644−0.05470.14290.118*
H15C0.00470.07650.08170.118*
C160.2298 (3)0.3783 (3)0.6599 (2)0.0667 (7)
H16A0.24080.40100.58250.100*
H16B0.27310.43650.68930.100*
H16C0.12200.38950.70260.100*
C170.2863 (3)0.1950 (3)0.79273 (17)0.0620 (7)
H17A0.32180.25490.82710.093*
H17B0.34190.10410.79870.093*
H17C0.17760.20250.83030.093*
C190.4554 (2)0.3532 (2)0.26216 (15)0.0356 (5)
C200.5677 (2)0.3897 (2)0.16956 (15)0.0386 (5)
H200.65740.32590.13430.046*
C210.5475 (2)0.5199 (2)0.12944 (15)0.0395 (5)
C220.4165 (2)0.6183 (2)0.18321 (16)0.0401 (5)
C230.3081 (2)0.5825 (2)0.27940 (16)0.0401 (5)
C240.3262 (2)0.4511 (2)0.31724 (15)0.0402 (5)
H240.25100.42790.38040.048*
C250.7846 (3)0.4710 (3)−0.02256 (19)0.0637 (7)
H25A0.84800.44130.02460.096*
H25B0.84120.5123−0.08940.096*
H25C0.75650.3952−0.04280.096*
C260.1124 (3)0.6717 (3)0.44614 (19)0.0619 (7)
H26A0.04580.61060.45880.093*
H26B0.05240.75800.47750.093*
H26C0.18990.63710.48150.093*
O10.21042 (15)0.10108 (15)0.44842 (10)0.0387 (4)
O20.50511 (17)0.16061 (16)0.07249 (11)0.0510 (4)
O30.6537 (2)0.2498 (2)0.42231 (14)0.0770 (6)
O40.18392 (19)0.68547 (17)0.33083 (12)0.0575 (5)
O50.39109 (19)0.74774 (16)0.14607 (12)0.0555 (5)
H50.44870.75210.08130.073 (9)*
O60.64868 (18)0.56614 (16)0.03654 (12)0.0530 (4)
U11U22U33U12U13U23
C10.0421 (11)0.0337 (13)0.0199 (9)−0.0064 (9)−0.0053 (8)0.0003 (7)
C20.0538 (13)0.0461 (15)0.0271 (10)−0.0215 (11)−0.0090 (9)0.0029 (9)
C30.0586 (14)0.0583 (17)0.0297 (11)−0.0259 (13)−0.0163 (10)0.0083 (9)
C40.0692 (15)0.0593 (17)0.0239 (10)−0.0193 (13)−0.0115 (10)−0.0005 (9)
C50.0487 (12)0.0331 (13)0.0237 (9)−0.0060 (10)−0.0028 (9)−0.0005 (8)
C60.0393 (11)0.0327 (12)0.0232 (9)−0.0061 (9)−0.0047 (8)0.0018 (7)
C70.0339 (10)0.0413 (13)0.0235 (9)−0.0062 (9)−0.0024 (8)0.0024 (8)
C80.0402 (11)0.0398 (14)0.0252 (9)−0.0066 (10)−0.0068 (8)0.0025 (8)
C90.0458 (13)0.0583 (17)0.0372 (11)−0.0162 (12)−0.0113 (10)0.0029 (10)
C100.0585 (14)0.0681 (18)0.0382 (12)−0.0219 (13)−0.0209 (11)0.0044 (10)
C110.0577 (14)0.0515 (16)0.0275 (10)−0.0153 (12)−0.0139 (9)0.0006 (9)
C120.0507 (13)0.0514 (15)0.0238 (9)−0.0152 (11)−0.0083 (9)0.0050 (9)
C130.0396 (11)0.0395 (13)0.0230 (9)−0.0082 (9)−0.0081 (8)0.0028 (8)
C140.0564 (15)0.067 (2)0.0646 (16)−0.0124 (14)−0.0213 (13)0.0180 (13)
C150.103 (2)0.117 (3)0.0458 (14)−0.067 (2)−0.0367 (15)0.0168 (14)
C160.0893 (19)0.054 (2)0.0497 (14)−0.0081 (15)−0.0184 (13)−0.0075 (12)
C170.0836 (18)0.080 (2)0.0302 (11)−0.0318 (16)−0.0193 (12)0.0020 (11)
C190.0387 (11)0.0428 (14)0.0248 (9)−0.0140 (10)−0.0070 (8)0.0025 (8)
C200.0378 (11)0.0470 (15)0.0287 (10)−0.0140 (10)−0.0055 (8)0.0012 (9)
C210.0462 (12)0.0481 (15)0.0247 (10)−0.0206 (11)−0.0064 (9)0.0047 (9)
C220.0519 (13)0.0386 (14)0.0315 (10)−0.0147 (11)−0.0140 (9)0.0054 (9)
C230.0441 (12)0.0416 (15)0.0308 (10)−0.0077 (10)−0.0088 (9)−0.0005 (9)
C240.0423 (12)0.0449 (15)0.0264 (10)−0.0136 (10)−0.0009 (8)0.0045 (8)
C250.0559 (15)0.077 (2)0.0435 (13)−0.0255 (14)0.0073 (11)0.0093 (12)
C260.0513 (14)0.066 (2)0.0489 (14)0.0000 (13)0.0002 (11)−0.0063 (12)
O10.0433 (8)0.0533 (10)0.0188 (6)−0.0185 (7)−0.0048 (6)0.0037 (6)
O20.0561 (9)0.0598 (12)0.0250 (7)−0.0165 (8)0.0044 (7)0.0004 (6)
O30.0588 (11)0.1335 (19)0.0502 (10)−0.0510 (12)−0.0144 (9)0.0094 (10)
O40.0634 (10)0.0447 (11)0.0443 (9)0.0036 (8)−0.0047 (8)0.0056 (7)
O50.0733 (11)0.0444 (11)0.0366 (9)−0.0133 (9)−0.0053 (8)0.0110 (7)
O60.0582 (10)0.0533 (11)0.0370 (8)−0.0234 (8)0.0034 (7)0.0084 (7)
C1—C61.330 (2)C14—H14A0.9600
C1—O11.377 (2)C14—H14B0.9600
C1—C21.486 (3)C14—H14C0.9600
C2—C31.534 (3)C15—H15A0.9600
C2—H2A0.9700C15—H15B0.9600
C2—H2B0.9700C15—H15C0.9600
C3—C141.518 (3)C16—H16A0.9600
C3—C151.524 (3)C16—H16B0.9600
C3—C41.525 (3)C16—H16C0.9600
C4—C51.498 (3)C17—H17A0.9600
C4—H4A0.9700C17—H17B0.9600
C4—H4B0.9700C17—H17C0.9600
C5—O21.218 (2)C19—C201.383 (2)
C5—C61.466 (2)C19—C241.386 (3)
C6—C71.511 (3)C20—C211.376 (3)
C7—C81.513 (2)C20—H200.9300
C7—C191.525 (3)C21—O61.373 (2)
C7—H70.9800C21—C221.394 (3)
C8—C131.331 (3)C22—O51.358 (2)
C8—C91.460 (3)C22—C231.388 (3)
C9—O31.213 (2)C23—C241.378 (3)
C9—C101.512 (3)C23—O41.379 (3)
C10—C111.527 (3)C24—H240.9300
C10—H10A0.9700C25—O61.419 (3)
C10—H10B0.9700C25—H25A0.9600
C11—C161.520 (3)C25—H25B0.9600
C11—C121.523 (3)C25—H25C0.9600
C11—C171.532 (3)C26—O41.394 (3)
C12—C131.495 (2)C26—H26A0.9600
C12—H12A0.9700C26—H26B0.9600
C12—H12B0.9700C26—H26C0.9600
C13—O11.374 (2)O5—H50.8200
C6—C1—O1122.65 (17)O1—C13—C12110.98 (15)
C6—C1—C2125.82 (16)C3—C14—H14A109.5
O1—C1—C2111.53 (15)C3—C14—H14B109.5
C1—C2—C3111.07 (16)H14A—C14—H14B109.5
C1—C2—H2A109.4C3—C14—H14C109.5
C3—C2—H2A109.4H14A—C14—H14C109.5
C1—C2—H2B109.4H14B—C14—H14C109.5
C3—C2—H2B109.4C3—C15—H15A109.5
H2A—C2—H2B108.0C3—C15—H15B109.5
C14—C3—C15109.6 (2)H15A—C15—H15B109.5
C14—C3—C4111.30 (18)C3—C15—H15C109.5
C15—C3—C4109.35 (19)H15A—C15—H15C109.5
C14—C3—C2109.76 (18)H15B—C15—H15C109.5
C15—C3—C2109.56 (18)C11—C16—H16A109.5
C4—C3—C2107.25 (18)C11—C16—H16B109.5
C5—C4—C3116.38 (16)H16A—C16—H16B109.5
C5—C4—H4A108.2C11—C16—H16C109.5
C3—C4—H4A108.2H16A—C16—H16C109.5
C5—C4—H4B108.2H16B—C16—H16C109.5
C3—C4—H4B108.2C11—C17—H17A109.5
H4A—C4—H4B107.3C11—C17—H17B109.5
O2—C5—C6120.52 (19)H17A—C17—H17B109.5
O2—C5—C4120.89 (17)C11—C17—H17C109.5
C6—C5—C4118.57 (17)H17A—C17—H17C109.5
C1—C6—C5117.83 (18)H17B—C17—H17C109.5
C1—C6—C7123.52 (16)C20—C19—C24119.02 (19)
C5—C6—C7118.64 (16)C20—C19—C7120.75 (18)
C6—C7—C8109.05 (15)C24—C19—C7120.14 (16)
C6—C7—C19110.37 (15)C21—C20—C19120.34 (19)
C8—C7—C19112.14 (16)C21—C20—H20119.8
C6—C7—H7108.4C19—C20—H20119.8
C8—C7—H7108.4O6—C21—C20125.29 (19)
C19—C7—H7108.4O6—C21—C22113.83 (19)
C13—C8—C9118.53 (17)C20—C21—C22120.88 (18)
C13—C8—C7122.46 (18)O5—C22—C23118.68 (19)
C9—C8—C7119.01 (17)O5—C22—C21122.90 (18)
O3—C9—C8120.50 (19)C23—C22—C21118.42 (19)
O3—C9—C10120.9 (2)C24—C23—O4123.88 (18)
C8—C9—C10118.48 (18)C24—C23—C22120.51 (19)
C9—C10—C11115.06 (18)O4—C23—C22115.60 (19)
C9—C10—H10A108.5C23—C24—C19120.71 (18)
C11—C10—H10A108.5C23—C24—H24119.6
C9—C10—H10B108.5C19—C24—H24119.6
C11—C10—H10B108.5O6—C25—H25A109.5
H10A—C10—H10B107.5O6—C25—H25B109.5
C16—C11—C12110.94 (19)H25A—C25—H25B109.5
C16—C11—C10110.21 (19)O6—C25—H25C109.5
C12—C11—C10107.87 (18)H25A—C25—H25C109.5
C16—C11—C17108.95 (19)H25B—C25—H25C109.5
C12—C11—C17108.65 (18)O4—C26—H26A109.5
C10—C11—C17110.20 (19)O4—C26—H26B109.5
C13—C12—C11112.93 (17)H26A—C26—H26B109.5
C13—C12—H12A109.0O4—C26—H26C109.5
C11—C12—H12A109.0H26A—C26—H26C109.5
C13—C12—H12B109.0H26B—C26—H26C109.5
C11—C12—H12B109.0C13—O1—C1118.10 (14)
H12A—C12—H12B107.8C23—O4—C26116.45 (17)
C8—C13—O1123.71 (16)C22—O5—H5109.5
C8—C13—C12125.31 (18)C21—O6—C25116.86 (18)
C6—C1—C2—C3−30.4 (3)C10—C11—C12—C13−48.2 (2)
O1—C1—C2—C3150.19 (18)C17—C11—C12—C13−167.64 (19)
C1—C2—C3—C14−69.1 (2)C9—C8—C13—O1−173.90 (19)
C1—C2—C3—C15170.5 (2)C7—C8—C13—O15.3 (3)
C1—C2—C3—C451.9 (2)C9—C8—C13—C125.7 (3)
C14—C3—C4—C571.9 (2)C7—C8—C13—C12−175.1 (2)
C15—C3—C4—C5−166.9 (2)C11—C12—C13—C822.5 (3)
C2—C3—C4—C5−48.2 (3)C11—C12—C13—O1−157.83 (18)
C3—C4—C5—O2−162.6 (2)C6—C7—C19—C20−102.2 (2)
C3—C4—C5—C619.2 (3)C8—C7—C19—C20136.03 (18)
O1—C1—C6—C5177.92 (18)C6—C7—C19—C2474.3 (2)
C2—C1—C6—C5−1.4 (3)C8—C7—C19—C24−47.5 (2)
O1—C1—C6—C7−3.6 (3)C24—C19—C20—C21−3.3 (3)
C2—C1—C6—C7177.01 (19)C7—C19—C20—C21173.18 (18)
O2—C5—C6—C1−170.53 (19)C19—C20—C21—O6−177.93 (18)
C4—C5—C6—C17.7 (3)C19—C20—C21—C222.2 (3)
O2—C5—C6—C711.0 (3)O6—C21—C22—O50.7 (3)
C4—C5—C6—C7−170.83 (19)C20—C21—C22—O5−179.44 (18)
C1—C6—C7—C87.4 (3)O6—C21—C22—C23−178.83 (17)
C5—C6—C7—C8−174.20 (17)C20—C21—C22—C231.1 (3)
C1—C6—C7—C19−116.2 (2)O5—C22—C23—C24177.31 (19)
C5—C6—C7—C1962.2 (2)C21—C22—C23—C24−3.2 (3)
C6—C7—C8—C13−8.1 (3)O5—C22—C23—O4−1.7 (3)
C19—C7—C8—C13114.5 (2)C21—C22—C23—O4177.83 (18)
C6—C7—C8—C9171.07 (18)O4—C23—C24—C19−179.03 (18)
C19—C7—C8—C9−66.4 (2)C22—C23—C24—C192.1 (3)
C13—C8—C9—O3172.1 (2)C20—C19—C24—C231.2 (3)
C7—C8—C9—O3−7.1 (3)C7—C19—C24—C23−175.31 (18)
C13—C8—C9—C10−4.4 (3)C8—C13—O1—C1−0.4 (3)
C7—C8—C9—C10176.45 (19)C12—C13—O1—C1179.94 (16)
O3—C9—C10—C11158.3 (2)C6—C1—O1—C13−0.5 (3)
C8—C9—C10—C11−25.3 (3)C2—C1—O1—C13178.95 (17)
C9—C10—C11—C16−70.9 (3)C24—C23—O4—C2627.8 (3)
C9—C10—C11—C1250.4 (3)C22—C23—O4—C26−153.2 (2)
C9—C10—C11—C17168.8 (2)C20—C21—O6—C250.3 (3)
C16—C11—C12—C1372.6 (2)C22—C21—O6—C25−179.86 (19)
D—H···AD—HH···AD···AD—H···A
O5—H5···O2i0.822.022.762 (2)151
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O5—H5⋯O2i0.822.022.762 (2)151

Symmetry code: (i) .

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-02-12

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