| Literature DB >> 22586464 |
Serge A Wich1, Michael Krützen, Adriano R Lameira, Alexander Nater, Natasha Arora, Meredith L Bastian, Ellen Meulman, Helen C Morrogh-Bernard, S Suci Utami Atmoko, Joko Pamungkas, Dyah Perwitasari-Farajallah, Madeleine E Hardus, Maria van Noordwijk, Carel P van Schaik.
Abstract
BACKGROUND: Several studies suggested great ape cultures, arguing that human cumulative culture presumably evolved from such a foundation. These focused on conspicuous behaviours, and showed rich geographic variation, which could not be attributed to known ecological or genetic differences. Although geographic variation within call types (accents) has previously been reported for orang-utans and other primate species, we examine geographic variation in the presence/absence of discrete call types (dialects). Because orang-utans have been shown to have geographic variation that is not completely explicable by genetic or ecological factors we hypothesized that this will be similar in the call domain and predict that discrete call type variation between populations will be found. METHODOLOGY/PRINCIPALEntities:
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Year: 2012 PMID: 22586464 PMCID: PMC3346723 DOI: 10.1371/journal.pone.0036180
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Orang-utan call spectrograms.
Spectrograms of orang-utan calls: a) ‘nest smacks’; b) ‘raspberries’; c) ‘harmonic uuhs’; d) ‘throat scrapes’. The nest smack and raspberry are produced by orangutans during nest building. The harmonic uuh and throatscrape are produced by mothers towards infants that are separated from them and functions as a ‘come-hither’ call because infants return to the mother after these calls.
Figure 2HVR-I haplotype median-joining network.
A median-joining network showing HVR-I haplotypes in the different populations in relation to orang-utan calls: nesting calls and mother-infant calls. The size of each circle corresponds with the number of individuals with this particular haplotype, with the smallest circles representing one individual with this particular haplotype. Black dots indicate mutational steps connecting the sampled haplotypes, and thus represent haplotypes that were not sampled and may or may not exist. Each number on the network indicates a single base-pair mutation. First letter code in blue refers to the kind of nesting call (r = ’raspberry‘; s = ’nest smack‘; - = no call). Second letter code refers to the mother-infant call (u = ’harmonic uuh‘; t = ’throat scrape‘; - = no call).
Orang-utan site information.
| Site(start of study) | Coordinates/habitat | No. hrs of focal observation | Individuals observed nesting (# making calls) | Mother-infant pairs observed (making call) | No. of sequenced individuals |
| Tuanan (B) (2003–) | 2° 09′ S 114° 26′ E/Peat swamp | >15,000 | 21 (21) | 8 (8) | 20 |
| Sg. Lading (B)(2005–2007) | 2° 15′ S 114° 22′ E/Peat swamp | >2,000 | 6 (0) | 4 (0) | 24 |
| Sabangau (B) (2003–) | 2° 19′ S 114° 00′ E/Peat swamp | >3,000 | 19 (18) | 4 (0) | 21 |
| Ketambe (S) (1971–) | 3° 41′ N 97° 39′ E/Dryland | >15,000 | 20 (0) | 6 (5) | 16 |
| Suaq (S) (1994–) | 3° 04′ N 97° 26′ E/Peat swamp/dryland | >10,000 | 28 (25) | 12 (0) | 15 |
Note: (B) = Borneo, (S) = Sumatra. For the number of individuals making nests, we only included individuals that were followed for more than 10 nights, because after this number of night nests most orang-utans that occur in sites were they make nest calls were found to have made a nest call. At sites where mother-infant calls were heard, they occur once every 7.8 mother-infant follow hours for Ketambe (994 total follow hours) and 42.6 follow hours for Tuanan (5827 total follow hours). At the three sites were these calls were not heard, many more follow hours have been collected (Sabangau: 1709 hrs; Sg. Lading: 2140 hrs; and Suaq: 7665 hrs).
Figure 3Average genetic distance between pairs of sites.
Average genetic distance (maximum composite likelihood distance of HVR-I haplotypes, see Material and Methods) between pairs of sites in five orangutan populations, for two different situations: where nesting calls and mother-infant calls are the same in both sites, and where the two sites are different. If genes play a role in the production of these calls, pairs of sites with the same behavioural state should show smaller average genetic distance than pairs of sites with different behavioural states.
Figure 4Cumulative distribution of randomised genetic differentiation values (GDV) among populations.
GDVs were generated as follows: the observed behavioural states were randomly assigned to each of the 5 sites a thousand times, thereby producing site pairs with the same, but also with different behavioural states compared to those that were originally observed for each randomisation. For each randomisation, we then calculated GDV, defined as the difference between the averaged genetic maximum composite likelihood distance among sites pairs with different behavioural states and the averaged genetic maximum composite likelihood distance among site pairs with the same behavioural state. If genetic similarity played a role in the observed pattern, the observed GDVs are expected to be positive. The star indicates the value actually observed in this study.