Literature DB >> 22582385

Genome sequence of Xanthomonas citri pv. mangiferaeindicae strain LMG 941.

Samriti Midha1, Manish Ranjan, Vikas Sharma, Anil Kumar Pinnaka, Prabhu B Patil.   

Abstract

We report the 5.1-Mb genome sequence of Xanthomonas citri pv. mangiferaeindicae strain LMG 941, the causal agent of bacterial black spot in mango. Apart from evolutionary studies, the draft genome will be a valuable resource for the epidemiological studies and quarantine of this phytopathogen.

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Year:  2012        PMID： 22582385      PMCID： PMC3370635          DOI： 10.1128/JB.00433-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  6 in total

1.  Genome sequence of Xanthomonas axonopodis pv. punicae strain LMG 859.

Authors:  Vikas Sharma; Samriti Midha; Manish Ranjan; Anil Kumar Pinnaka; Prabhu B Patil
Journal:  J Bacteriol       Date:  2012-05       Impact factor: 3.490

2.  Genetic diversity of citrus bacterial canker pathogens preserved in herbarium specimens.

Authors:  Wenbin Li; Qijian Song; Ronald H Brlansky; John S Hartung
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-12       Impact factor: 11.205

3.  A new bacterial disease of Mangifera indica L.

Authors:  M K PATEL; L MONIZ; Y S KULKARNI
Journal:  Curr Sci       Date:  1948-06       Impact factor: 1.102

4.  Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic Xanthomonas spp.

Authors:  Adam J Bogdanove; Ralf Koebnik; Hong Lu; Ayako Furutani; Samuel V Angiuoli; Prabhu B Patil; Marie-Anne Van Sluys; Robert P Ryan; Damien F Meyer; Sang-Wook Han; Gudlur Aparna; Misha Rajaram; Arthur L Delcher; Adam M Phillippy; Daniela Puiu; Michael C Schatz; Martin Shumway; Daniel D Sommer; Cole Trapnell; Faiza Benahmed; George Dimitrov; Ramana Madupu; Diana Radune; Steven Sullivan; Gopaljee Jha; Hiromichi Ishihara; Sang-Won Lee; Alok Pandey; Vikas Sharma; Malinee Sriariyanun; Boris Szurek; Casiana M Vera-Cruz; Karin S Dorman; Pamela C Ronald; Valérie Verdier; J Maxwell Dow; Ramesh V Sonti; Seiji Tsuge; Volker P Brendel; Pablo D Rabinowicz; Jan E Leach; Frank F White; Steven L Salzberg
Journal:  J Bacteriol       Date:  2011-07-22       Impact factor: 3.490

5.  The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes.

Authors:  F Meyer; D Paarmann; M D'Souza; R Olson; E M Glass; M Kubal; T Paczian; A Rodriguez; R Stevens; A Wilke; J Wilkening; R A Edwards
Journal:  BMC Bioinformatics       Date:  2008-09-19       Impact factor: 3.169

6.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971
  6 in total
  8 in total

1.  Ecological and Evolutionary Insights into Xanthomonas citri Pathovar Diversity.

Authors:  Kanika Bansal; Samriti Midha; Sanjeet Kumar; Prabhu B Patil
Journal:  Appl Environ Microbiol       Date:  2017-04-17       Impact factor: 4.792

2.  Genomic insights into the evolutionary origin of Xanthomonas axonopodis pv. citri and its ecological relatives.

Authors:  Samriti Midha; Prabhu B Patil
Journal:  Appl Environ Microbiol       Date:  2014-08-01       Impact factor: 4.792

3.  Ecological genomics in Xanthomonas: the nature of genetic adaptation with homologous recombination and host shifts.

Authors:  Chao-Li Huang; Pei-Hua Pu; Hao-Jen Huang; Huang-Mo Sung; Hung-Jiun Liaw; Yi-Min Chen; Chien-Ming Chen; Ming-Ban Huang; Naoki Osada; Takashi Gojobori; Tun-Wen Pai; Yu-Tin Chen; Chi-Chuan Hwang; Tzen-Yuh Chiang
Journal:  BMC Genomics       Date:  2015-03-15       Impact factor: 3.969

4.  Complete Genome Sequence of Xanthomonas citri pv. anacardii Strain IBSBF2579 from Brazil.

Authors:  Wilson José Silva Junior; Antonio Roberto Gomes Farias; Nelson Bernardi Lima; Ana Maria Benko-Iseppon; Flávia Aburjaile; Valdir Queiroz Balbino; Raul Maia Falcão; Sérgio de Sa Leitão Paiva Júnior; Lucas Christian Sousa-Paula; Rosa Lima Ramos Mariano; Elineide Barbosa Souza; Marco Aurélio Siqueira Gama
Journal:  Genome Announc       Date:  2018-02-01

5.  Comparative genomic and transcriptome analyses of pathotypes of Xanthomonas citri subsp. citri provide insights into mechanisms of bacterial virulence and host range.

Authors:  Neha Jalan; Dibyendu Kumar; Maxuel O Andrade; Fahong Yu; Jeffrey B Jones; James H Graham; Frank F White; João C Setubal; Nian Wang
Journal:  BMC Genomics       Date:  2013-08-14       Impact factor: 3.969

6.  Draft genome sequence of Xanthomonas fragariae reveals reductive evolution and distinct virulence-related gene content.

Authors:  Joachim Vandroemme; Bart Cottyn; Steve Baeyen; Paul De Vos; Martine Maes
Journal:  BMC Genomics       Date:  2013-11-25       Impact factor: 3.969

7.  Horizontal gene transfer plays a major role in the pathological convergence of Xanthomonas lineages on common bean.

Authors:  Nicolas W G Chen; Laurana Serres-Giardi; Mylène Ruh; Martial Briand; Sophie Bonneau; Armelle Darrasse; Valérie Barbe; Lionel Gagnevin; Ralf Koebnik; Marie-Agnès Jacques
Journal:  BMC Genomics       Date:  2018-08-13       Impact factor: 3.969

8.  Origin and diversification of Xanthomonas citri subsp. citri pathotypes revealed by inclusive phylogenomic, dating, and biogeographic analyses.

Authors:  José S L Patané; Joaquim Martins; Luiz Thiberio Rangel; José Belasque; Luciano A Digiampietri; Agda Paula Facincani; Rafael Marini Ferreira; Fabrício José Jaciani; Yunzeng Zhang; Alessandro M Varani; Nalvo F Almeida; Nian Wang; Jesus A Ferro; Leandro M Moreira; João C Setubal
Journal:  BMC Genomics       Date:  2019-09-09       Impact factor: 3.969
  8 in total

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