Literature DB >> 22580471

The nucleolar detention pathway: A cellular strategy for regulating molecular networks.

Timothy E Audas1, Mathieu D Jacob, Stephen Lee.   

Abstract

Molecular dynamics ensures that proteins and other factors reach their site of action in a timely and efficient manner. This is essential to the formation of molecular complexes, as they require an ever-changing framework of specific interactions to facilitate a model of self-assembly. Therefore, the absence or reduced availability of any key component would significantly impair complex formation and disrupt all downstream molecular networks. Recently, we identified a regulatory mechanism that modulates protein mobility through the inducible expression of a novel family of long noncoding RNA. In response to diverse environmental stimuli, the nucleolar detention pathway (NoDP) captures and immobilizes essential cellular factors within the nucleolus away from their effector molecules. The vast array of putative NoDP targets, including DNA (cytosine-5)-methyltransferase 1 (DNMT1) and the delta catalytic subunit of DNA polymerase (POLD1), suggests that this may be a common and significant regulatory mechanism. Here, we discuss the implications of this new posttranslational strategy for regulating molecular networks.

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Year:  2012        PMID: 22580471      PMCID: PMC3368857          DOI: 10.4161/cc.20140

Source DB:  PubMed          Journal:  Cell Cycle        ISSN: 1551-4005            Impact factor:   4.534


  41 in total

1.  Movement of nuclear poly(A) RNA throughout the interchromatin space in living cells.

Authors:  J C Politz; R A Tuft; T Pederson; R H Singer
Journal:  Curr Biol       Date:  1999-03-25       Impact factor: 10.834

2.  Nucleolar proteome dynamics.

Authors:  Jens S Andersen; Yun W Lam; Anthony K L Leung; Shao-En Ong; Carol E Lyon; Angus I Lamond; Matthias Mann
Journal:  Nature       Date:  2005-01-06       Impact factor: 49.962

Review 3.  Protein posttranslational modifications: the chemistry of proteome diversifications.

Authors:  Christopher T Walsh; Sylvie Garneau-Tsodikova; Gregory J Gatto
Journal:  Angew Chem Int Ed Engl       Date:  2005-12-01       Impact factor: 15.336

4.  Intergenic transcripts regulate the epigenetic state of rRNA genes.

Authors:  Christine Mayer; Kerstin-Maike Schmitz; Junwei Li; Ingrid Grummt; Raffaella Santoro
Journal:  Mol Cell       Date:  2006-05-05       Impact factor: 17.970

5.  Diffusional mobility of Golgi proteins in membranes of living cells.

Authors:  N B Cole; C L Smith; N Sciaky; M Terasaki; M Edidin; J Lippincott-Schwartz
Journal:  Science       Date:  1996-08-09       Impact factor: 47.728

6.  Nuclear membrane dynamics and reassembly in living cells: targeting of an inner nuclear membrane protein in interphase and mitosis.

Authors:  J Ellenberg; E D Siggia; J E Moreira; C L Smith; J F Presley; H J Worman; J Lippincott-Schwartz
Journal:  J Cell Biol       Date:  1997-09-22       Impact factor: 10.539

7.  The tumour suppressor protein VHL targets hypoxia-inducible factors for oxygen-dependent proteolysis.

Authors:  P H Maxwell; M S Wiesener; G W Chang; S C Clifford; E C Vaux; M E Cockman; C C Wykoff; C W Pugh; E R Maher; P J Ratcliffe
Journal:  Nature       Date:  1999-05-20       Impact factor: 49.962

8.  A multistep, GTP-driven mechanism controlling the dynamic cycling of nucleostemin.

Authors:  Robert Y L Tsai; Ronald D G McKay
Journal:  J Cell Biol       Date:  2005-01-17       Impact factor: 10.539

9.  Regulation of ubiquitin ligase dynamics by the nucleolus.

Authors:  Karim Mekhail; Mireille Khacho; Amanda Carrigan; Robert R J Hache; Lakshman Gunaratnam; Stephen Lee
Journal:  J Cell Biol       Date:  2005-08-29       Impact factor: 10.539

10.  Nucleolar sequestration of RelA (p65) regulates NF-kappaB-driven transcription and apoptosis.

Authors:  Lesley A Stark; Malcolm G Dunlop
Journal:  Mol Cell Biol       Date:  2005-07       Impact factor: 4.272

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  23 in total

Review 1.  Nucleolar DNA: the host and the guests.

Authors:  E Smirnov; D Cmarko; T Mazel; M Hornáček; I Raška
Journal:  Histochem Cell Biol       Date:  2016-02-04       Impact factor: 4.304

2.  Life time of some RNA products of rDNA intergenic spacer in HeLa cells.

Authors:  T Vacík; S Kereïche; I Raška; D Cmarko; E Smirnov
Journal:  Histochem Cell Biol       Date:  2019-07-25       Impact factor: 4.304

3.  Nucleolar aggresomes mediate release of pericentric heterochromatin and nuclear destruction of genotoxically treated cancer cells.

Authors:  Kristine Salmina; Anda Huna; Inna Inashkina; Alexander Belyayev; Jekabs Krigerts; Ladislava Pastova; Alejandro Vazquez-Martin; Jekaterina Erenpreisa
Journal:  Nucleus       Date:  2017-01-09       Impact factor: 4.197

4.  The Ligand of Ate1 is intrinsically disordered and participates in nucleolar phase separation regulated by Jumonji Domain Containing 6.

Authors:  Akshaya Arva; Yasar Arfat T Kasu; Jennifer Duncan; Mosleh A Alkhatatbeh; Christopher S Brower
Journal:  Proc Natl Acad Sci U S A       Date:  2020-12-21       Impact factor: 11.205

Review 5.  It Pays To Be in Phase.

Authors:  Alan K Itakura; Raymond A Futia; Daniel F Jarosz
Journal:  Biochemistry       Date:  2018-03-13       Impact factor: 3.162

6.  Membraneless Compartmentalization Facilitates Enzymatic Cascade Reactions and Reduces Substrate Inhibition.

Authors:  Taisuke Kojima; Shuichi Takayama
Journal:  ACS Appl Mater Interfaces       Date:  2018-09-14       Impact factor: 9.229

7.  Kinesin family 17 (osmotic avoidance abnormal-3) is dispensable for photoreceptor morphology and function.

Authors:  Li Jiang; Beatrice M Tam; Guoxing Ying; Sen Wu; William W Hauswirth; Jeanne M Frederick; Orson L Moritz; Wolfgang Baehr
Journal:  FASEB J       Date:  2015-07-30       Impact factor: 5.191

Review 8.  Nucleolar control of p53: a cellular Achilles' heel and a target for cancer therapy.

Authors:  Nikolina Vlatković; Mark T Boyd; Carlos P Rubbi
Journal:  Cell Mol Life Sci       Date:  2013-05-18       Impact factor: 9.261

9.  Lipid sponge droplets as programmable synthetic organelles.

Authors:  Ahanjit Bhattacharya; Henrike Niederholtmeyer; Kira A Podolsky; Rupak Bhattacharya; Jing-Jin Song; Roberto J Brea; Chu-Hsien Tsai; Sunil K Sinha; Neal K Devaraj
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-21       Impact factor: 11.205

10.  Identification of Nucleolus-Associated Chromatin Domains Reveals a Role for the Nucleolus in 3D Organization of the A. thaliana Genome.

Authors:  Frédéric Pontvianne; Marie-Christine Carpentier; Nathalie Durut; Veronika Pavlištová; Karin Jaške; Šárka Schořová; Hugues Parrinello; Marine Rohmer; Craig S Pikaard; Miloslava Fojtová; Jiří Fajkus; Julio Sáez-Vásquez
Journal:  Cell Rep       Date:  2016-07-28       Impact factor: 9.423

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