| Literature DB >> 22569416 |
Bojana Crček1, Jernej Baškovč, Uroš Grošelj, Drago Kočar, Georg Dahmann, Branko Stanovnik, Jurij Svete.
Abstract
A library of 24 6-(5-oxo-1-phenylpyrrolidin-3-yl)pyrimidine-5-carboxamides 10{1,2; 1-12} was prepared by a parallel solution-phase approach. The synthesis comprises a five-step transformation of itaconic acid (11) into 1-methyl and 1-phenyl substituted 6-(5-oxo-1-phenylpyrrolidin-3-yl)pyrimidine-5-carboxylic acids 17{1,2} followed by parallel amidation of 17{1,2} with a series of 12 aliphatic amines 18{1-12} to afford the corresponding carboxamides 10 in good overall yields and in 80-100% purity.Entities:
Mesh:
Substances:
Year: 2012 PMID: 22569416 PMCID: PMC6268364 DOI: 10.3390/molecules17055363
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1Aminoethyl substituted heterocycles 1–10.
Scheme 1Synthesis of 4-(5-Oxo-1-phenylpyrrolidin-3-yl)pyrimidine-5-carboxylic Acids 17{1,2}.
Scheme 2Parallel synthesis of 6-(5-oxo-1-phenylpyrrolidin-3-yl)pyrimidine-5-carboxamides 10.
Selected experimental data for compounds 10{1,2; 1–12}.
| Compd. | R1 | R2R3NH 18 | Workup [a] | Yield (%) | Purity (%) |
|---|---|---|---|---|---|
| Me | 1-pentylamine
| B | 85 | 80 [b] | |
| Me | cyclohexylamine
| B | 69 | 100 [b] | |
| Me | benzylamine
| A | 77 | 100 [b,c] | |
| Me | 2-methoxyethylamine
| A | 28 | 100 [b,c] | |
| Me | 3-amino-1-propanol
| B | 94 | 81 [b] | |
| Me | 3-dimethylamino-1-propylamine
| B | 40 | 94 [b] | |
| Me | 2-picolylamine
| B | 76 | 100 [b] | |
| Me | diethylamine
| B | 100 | 100 [b] | |
| Me | pyrrolidine
| B | 79 | 100 [b] | |
| Me | piperidine
| B | 100 | 100 [b] | |
| Me | morpholine
| B | 99 | 100 [b] | |
| Me | 4-methylpiperazine
| B | 100 | 100 [b] | |
| Ph | 1-pentylamine
| A | 100 | 100 [b,c] | |
| Ph | cyclohexylamine
| A | 100 | 86 [b,c] | |
| Ph | benzylamine
| A | 77 | 100 [b,c] | |
| Ph | 2-methoxyethylamine
| A | 65 | 100 [b,c] | |
| Ph | 3-amino-1-propanol
| A | 98 | 84 [b,c] | |
| Ph | 3-dimethylamino-1-propylamine
| A | 71 | 100 [b] | |
| Ph | 2-picolylamine
| A | 89 | 87 [b,c] | |
| Ph | diethylamine
| B | 68 | 88 [b,c] | |
| Ph | pyrrolidine
| B | 100 | 100 [b] | |
| Ph | piperidine
| B | 100 | 100 [b] | |
| Ph | morpholine
| B | 95 | 100 [b] | |
| Ph | 4-methylpiperazine
| B | 100 | 100 [b] |
[a] Workup A: filtration of the reaction mixture; Workup B: evaporation of the reaction mixture, followed by DFCC purification. [b] Determined by LC-MS, 1H-NMR, and 13C-NMR. [c] Confirmed by elemental analysis. The found values for C, H, and N were within ±0.4% range with respect to the theoretical values.
Selected NMR data for compounds 10{1,2; 1–12}.
| Compd. | δ (ppm) | 3
| |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4-H | 2'-Ha | 2'-Hb | 3'-H | 4'-Ha | 4'-Hb | 2'a-2'b | 2'a-3' | 2'b-3' | 3'-4'a | 3'-4'b | 4'a-4'b | ||
| 9.11 | 4.15 | 4.24 | 4.70 | 2.96 | 3.17 | 9.6 | 6.4 | 8.4 | 9.1 | 7.3 | 16.9 | ||
| 9.28 | 4.16 | 4.36 | 4.78 | 3.04 | 3.29 | 9.7 | 5.4 | 8.1 | 8.9 | 6.2 | 16.9 | ||
| 9.05 | 4.00 | 4.23 | 4.56 | 2.92 [a] | 9.8 | 5.4 | 8.5 | [a] | [a] | [a] | |||
| 9.25 | 4.06 | 4.35 | 4.73 | 2.96 | 3.03 | 9.9 | 4.1 | 7.9 | 4.9 | 8.6 | 16.7 | ||
| 8.62 | 4.14 | 4.23 | 4.28 | 2.90 | 3.15 | 9.3 | 6.5 | 7.3 | 8.8 | 7.3 | 17.0 | ||
| 8.60 | 4.16 | 4.22 | 4.27 | 2.91 | 3.15 | 9.1 | 6.5 | 8.7 | 8.8 | 7.5 | 16.9 | ||
| 8.63 | 4.09 | 4.18 | 4.28 | 2.83 | 3.10 | 9.5 | 6.8 | 8.9 | 9.0 | 7.7 | 16.9 | ||
| 8.65 | 4.15 | 4.21 | 4.28 | 2.90 | 3.16 | 9.4 | 7.1 | 8.6 | 8.9 | 7.9 | 16.8 | ||
| 8.65 | 4.16 | 4.22 | 4.31 | 2.92 | 3.12 | 9.6 | 6.8 | 8.9 | 9.0 | 7.7 | 16.9 | ||
| 8.61 | 4.14 | 4.25 | 4.43 | 2.92 | 3.18 | 9.6 | 6.7 | 8.4 | 9.1 | 7.8 | 16.9 | ||
| 8.78 | 4.16 | 4.22 | 4.34 | 2.93 | 3.19 | 9.5 | 7.1 | 8.9 | 9.0 | 8.0 | 16.9 | ||
| 8.49 | 4.13 | 4.20 | 3.84 | 2.88 | [b] | 8.5 | 8.5 | 8.5 | 8.8 | [a] | 16.7 | ||
| 8.56 | 4.17 | 4.21 | 3.96 | 2.90 | 3.17 | 9.5 | 8.4 | 7.6 | 9.0 | 8.7 | 16.9 | ||
| 8.47 | 4.19 [a] | 3.90 | 2.90 | 3.19 | [a] | [a] | [a] | [a] | [a] | [a] | |||
| 8.48 | 4.19 [a] | 3.91 | 2.90 | 3.18 | [a] | [a] | [a] | [a] | [a] | [a] | |||
| 8.47 | 4.17 [a] | 3.89 | 2.90 | 3.19 | [a] | [a] | [a] | [a] | [a] | [a] | |||
| 8.77 | 4.14 | 4.31 | 4.35 | 2.95 | 3.23 | 9.1 | 5.2 | 8.6 | 6.5 | 8.7 | 16.9 | ||
| 8.75 | 4.15 | ~4.3 [a] | 2.95 | 3.23 | 9.6 | 4.8 | [a] | 8.8 | 6.5 | 16.9 | |||
| 8.81 | 4.14 | 4.31 | 4.39 | 2.96 | 3.26 | 9.6 | 5.8 | 8.8 | 8.8 | 6.7 | 16.9 | ||
| 8.82 | 4.17 | 4.32 | 4.37 | 2.98 | 3.27 | 9.4 | 5.8 | 8.8 | 8.6 | 6.8 | 16.8 | ||
| 8.80 | 4.17 | 4.31 | 4.38 | 2.98 | 3.21 | 9.6 | 5.6 | 8.9 | 8.7 | 6.5 | 16.9 | ||
| 8.77 | 4.20 | 4.28 | 4.51 | 3.00 | 3.29 | 9.7 | 5.8 | 8.1 | 8.9 | 6.7 | 16.9 | ||
| 8.96 | 4.19 | 4.32 | 4.44 | 3.00 | 3.29 | 9.6 | 6.1 | 8.3 | 8.9 | 7.1 | 16.9 | ||
| 8.65 | 4.22 | 4.24 | 3.92 | 2.95 | [a] | [a] | [a] | [a] | 8.9 | [a] | 16.9 | ||
| 8.72 | 4.24 | 4.27 | 4.06 | 2.97 | 3.28 | 9.7 | 6.8 | 8.2 | 8.9 | 7.8 | 16.9 | ||
| 8.63 | 4.24 | 4.24 | 3.98 | 2.96 | 3.27 | [a] | [a] | [a] | [a] | [a] | [a] | ||
| 8.64 | 4.23 | 4.25 | 3.99 | 2.97 | 3.27 | [a] | [a] | [a] | 8.3 | 7.0 | 16.3 | ||
| 8.64 | 4.25 | 4.25 | 3.98 | 2.98 | 3.29 | [a] | [a] | [a] | [a] | [a] | [a] | ||
[a] Multiplet or broad singlet; [b] Overlapped by other signals.
Analytical data for separation of enantiomers of racemic compounds 10{1,2; 1–12}.
| Compound | R
| |||
|---|---|---|---|---|
| Enantiomer A | Enantiomer B | |||
| 50:50 | 4.084 | 5.078 | ||
| 50:50 | 9.987 | 16.650 | ||
| 50:50 | 8.208 | 12.734 | ||
| 50:50 | 5.321 | 7.031 | ||
| 50:50 | 3.828 | 4.542 | ||
| 50:50 | 5.083 | 5.477 | ||
| 50:50 | 7.577 | 8.352 | ||
| 50:50 | 5.728 | 6.380 | ||
| 50:50 | 6.960 | 9.471 | ||
| 50:50 | 5.798 | 7.185 | ||
| 50:50 | 8.509 | 9.619 | ||
| 50:50 | 7.206 | 7.928 | ||
| 50:50 | 4.409 | 5.515 | ||
| 50:50 | 4.537 | 5.840 | ||
| 50:50 | 11.292 | 29.227 | ||
| 50:50 | 6.462 | 7.522 | ||
| 80:20 | 14.864 | 18.975 | ||
| 50:50 | 6.160 | 19.660 | ||
| 50:50 | 10.778 | 12.764 | ||
| 50:50 | 5.293 | 24.904 | ||
| 50:50 | 9.284 | 10.960 | ||
| 50:50 | 7.102 | 8.212 | ||
| 80:20 | 14.864 | 18.975 | ||
| 50:50 | 14.429 | 19.625 | ||
Calculated physicochemical properties of compounds 10{1,2; 1–12} [a].
| Compound | MW (g·mol–1) | No. of atoms | CLogP | No. of HBD | No. of HBA | PSA (Ǻ2) |
|---|---|---|---|---|---|---|
| 366 | 53 | 2.82 | 1 | 6 | 74 | |
| 378 | 54 | 2.73 | 1 | 6 | 74 | |
| 386 | 51 | 2.67 | 1 | 6 | 74 | |
| 354 | 48 | 0.90 | 1 | 7 | 83 | |
| 354 | 48 | 0.46 | 2 | 7 | 94 | |
| 381 | 55 | 1.39 | 1 | 7 | 77 | |
| 387 | 50 | 1.17 | 1 | 7 | 86 | |
| 352 | 50 | 1.63 | 0 | 6 | 65 | |
| 350 | 48 | 1.20 | 0 | 6 | 65 | |
| 364 | 51 | 1.76 | 0 | 6 | 65 | |
| 366 | 49 | 0.73 | 0 | 7 | 75 | |
| 379 | 53 | 1.29 | 0 | 7 | 69 | |
| 428 | 60 | 4.42 | 1 | 6 | 74 | |
| 440 | 61 | 4.33 | 1 | 6 | 74 | |
| 448 | 58 | 4.27 | 1 | 6 | 74 | |
| 416 | 55 | 2.50 | 1 | 7 | 83 | |
| 416 | 55 | 2.06 | 2 | 7 | 94 | |
| 443 | 62 | 2.99 | 1 | 7 | 77 | |
| 449 | 57 | 2.77 | 1 | 7 | 86 | |
| 414 | 57 | 3.22 | 0 | 6 | 65 | |
| 412 | 55 | 2.80 | 0 | 6 | 65 | |
| 426 | 58 | 3.36 | 0 | 6 | 65 | |
| 428 | 56 | 2.33 | 0 | 7 | 75 | |
| 441 | 60 | 2.89 | 0 | 7 | 69 |
[a] Calculated with ChemBioDraw Ultra v11.0.