Literature DB >> 22562622

A fluid dynamics model of the growth of phototrophic biofilms.

F Clarelli1, C Di Russo, R Natalini, M Ribot.   

Abstract

A system of nonlinear hyperbolic partial differential equations is derived using mixture theory to model the formation of biofilms. In contrast with most of the existing models, our equations have a finite speed of propagation, without using artificial free boundary conditions. Adapted numerical scheme will be described in detail and several simulations will be presented in one and more space dimensions in the particular case of cyanobacteria biofilms. Besides, the numerical scheme we present is able to deal in a natural and effective way with regions where one of the phases is vanishing.

Mesh:

Year:  2012        PMID: 22562622     DOI: 10.1007/s00285-012-0538-5

Source DB:  PubMed          Journal:  J Math Biol        ISSN: 0303-6812            Impact factor:   2.259


  12 in total

Review 1.  Bacterial biofilms: from the natural environment to infectious diseases.

Authors:  Luanne Hall-Stoodley; J William Costerton; Paul Stoodley
Journal:  Nat Rev Microbiol       Date:  2004-02       Impact factor: 60.633

2.  Biodiversity of phototrophic biofilms dwelling on monumental fountains.

Authors:  Oana A Cuzman; Stefano Ventura; Claudio Sili; Cristina Mascalchi; Tulio Turchetti; Luigi P D'Acqui; Piero Tiano
Journal:  Microb Ecol       Date:  2010-05-06       Impact factor: 4.552

Review 3.  Cyanobacteria and biodeterioration of cultural heritage: a review.

Authors:  C A Crispim; C C Gaylarde
Journal:  Microb Ecol       Date:  2004-09-23       Impact factor: 4.552

4.  A multidimensional multispecies continuum model for heterogeneous biofilm development.

Authors:  Erik Alpkvist; Erik Alpkvista; Isaac Klapper
Journal:  Bull Math Biol       Date:  2007-01-09       Impact factor: 1.758

5.  A flow-lane incubator for studying freshwater and marine phototrophic biofilms.

Authors:  Barbara Zippel; Jan Rijstenbil; Thomas R Neu
Journal:  J Microbiol Methods       Date:  2007-05-29       Impact factor: 2.363

6.  Capsular polysaccharides of cultured phototrophic biofilms.

Authors:  F Di Pippo; A Bohn; R Congestri; R De Philippis; P Albertano
Journal:  Biofouling       Date:  2009       Impact factor: 3.209

7.  A multispecies biofilm model.

Authors:  O Wanner; W Gujer
Journal:  Biotechnol Bioeng       Date:  1986-03       Impact factor: 4.530

Review 8.  Adaptive significance of circadian programs in cyanobacteria.

Authors:  C H Johnson; S S Golden; T Kondo
Journal:  Trends Microbiol       Date:  1998-10       Impact factor: 17.079

9.  A multi-phase mathematical model of quorum sensing in a maturing Pseudomonas aeruginosa biofilm.

Authors:  K Anguige; J R King; J P Ward
Journal:  Math Biosci       Date:  2006-07-01       Impact factor: 2.144

Review 10.  Colorful niches of phototrophic microorganisms shaped by vibrations of the water molecule.

Authors:  Maayke Stomp; Jef Huisman; Lucas J Stal; Hans C P Matthijs
Journal:  ISME J       Date:  2007-07-12       Impact factor: 10.302

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  3 in total

1.  Investigation of the effects of various stress factors on biofilms and planktonic bacteria in cooling tower model system.

Authors:  Cansu Vatansever; Irfan Turetgen
Journal:  Arch Microbiol       Date:  2021-01-03       Impact factor: 2.552

Review 2.  Continuum and discrete approach in modeling biofilm development and structure: a review.

Authors:  M R Mattei; L Frunzo; B D'Acunto; Y Pechaud; F Pirozzi; G Esposito
Journal:  J Math Biol       Date:  2017-07-24       Impact factor: 2.259

3.  Understanding photosynthetic biofilm productivity and structure through 2D simulation.

Authors:  Bastien Polizzi; Andrea Fanesi; Filipa Lopes; Magali Ribot; Olivier Bernard
Journal:  PLoS Comput Biol       Date:  2022-04-04       Impact factor: 4.779

  3 in total

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