Literature DB >> 17211734

A multidimensional multispecies continuum model for heterogeneous biofilm development.

Erik Alpkvist1, Erik Alpkvista, Isaac Klapper.   

Abstract

We propose a multidimensional continuum model for heterogeneous growth of biofilm systems with multiple species and multiple substrates. The new model provides a deterministic framework for the study of the interactions between several spe1cies and their effects on biofilm heterogeneity. It consists of a system of partial differential equations derived on the basis of conservation laws and reaction kinetics. The derivation and key assumptions are presented. The assumptions used are a combination of those used in the established one dimensional model, due to Wanner and Gujer, and for the viscous fluid model, of Dockery and Klapper. The work of Wanner and Gujer in particular has been extensively used through the years, and thus this new model is an extension to several spatial dimensions of an already proven working model. The model equations are solved using numerical techniques, for purposes of simulation and verification. The new model is applied to two different biofilm systems in several spatial dimensions, one of which is equivalent to a system originally studied by Wanner and Gujer. Dimensionless formulations for these two systems are given, and numerical simulation results with varying initial conditions are presented.

Mesh:

Year:  2007        PMID: 17211734     DOI: 10.1007/s11538-006-9168-7

Source DB:  PubMed          Journal:  Bull Math Biol        ISSN: 0092-8240            Impact factor:   1.758


  15 in total

1.  Simulation of single-species bacterial-biofilm growth using the Glazier-Graner-Hogeweg model and the CompuCell3D modeling environment.

Authors:  Nikodem J Popławski; Abbas Shirinifard; Maciej Swat; James A Glazier
Journal:  Math Biosci Eng       Date:  2008-04       Impact factor: 2.080

2.  A fluid dynamics model of the growth of phototrophic biofilms.

Authors:  F Clarelli; C Di Russo; R Natalini; M Ribot
Journal:  J Math Biol       Date:  2012-05-05       Impact factor: 2.259

Review 3.  Continuum and discrete approach in modeling biofilm development and structure: a review.

Authors:  M R Mattei; L Frunzo; B D'Acunto; Y Pechaud; F Pirozzi; G Esposito
Journal:  J Math Biol       Date:  2017-07-24       Impact factor: 2.259

4.  Modelling mechanical characteristics of microbial biofilms by network theory.

Authors:  Alexander E Ehret; Markus Böl
Journal:  J R Soc Interface       Date:  2012-11-08       Impact factor: 4.118

5.  Variable cell morphology approach for individual-based modeling of microbial communities.

Authors:  Tomas Storck; Cristian Picioreanu; Bernardino Virdis; Damien J Batstone
Journal:  Biophys J       Date:  2014-05-06       Impact factor: 4.033

6.  Modeling the response of a biofilm to silver-based antimicrobial.

Authors:  A E Stine; D Nassar; J K Miller; C B Clemons; J P Wilber; G W Young; Y H Yun; C L Cannon; J G Leid; W J Youngs; A Milsted
Journal:  Math Biosci       Date:  2013-04-27       Impact factor: 2.144

7.  DIFFUSION IN BIOFILMS RESPIRING ON ELECTRODES.

Authors:  Rs Renslow; Jt Babauta; Pd Majors; H Beyenal
Journal:  Energy Environ Sci       Date:  2012-11-15       Impact factor: 38.532

8.  Utilizing a one-dimensional multispecies model to simulate the nutrient reduction and biomass structure in two types of H2-based membrane-aeration biofilm reactors (H2-MBfR): model development and parametric analysis.

Authors:  Zuowei Wang; Siqing Xia; Xiaoyin Xu; Chenhui Wang
Journal:  Environ Sci Pollut Res Int       Date:  2015-10-21       Impact factor: 4.223

9.  Modeling of the Bacillus subtilis Bacterial Biofilm Growing on an Agar Substrate.

Authors:  Xiaoling Wang; Guoqing Wang; Mudong Hao
Journal:  Comput Math Methods Med       Date:  2015-08-17       Impact factor: 2.238

10.  Assessment of bacterial and structural dynamics in aerobic granular biofilms.

Authors:  David G Weissbrodt; Thomas R Neu; Ute Kuhlicke; Yoan Rappaz; Christof Holliger
Journal:  Front Microbiol       Date:  2013-07-10       Impact factor: 5.640

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.