| Literature DB >> 22550394 |
Khaled K Abu-Amero1, Taif Anwar Azad, George L Spaeth, Jonathan Myers, L Jay Katz, Marlene Moster, Thomas M Bosley.
Abstract
PURPOSE: To investigate the expression of the myocilin gene (MYOC) in the blood of primary open angle glaucoma (POAG) patients to determine if altered systemic expression is playing a role.Entities:
Mesh:
Substances:
Year: 2012 PMID: 22550394 PMCID: PMC3339032
Source DB: PubMed Journal: Mol Vis ISSN: 1090-0535 Impact factor: 2.367
Primer sequences, PCR annealing temperature and amplicon size for the myocilin gene.
| Pro-F | 55 | 592 | |
| Pro-R | | | |
| 1F | 57 | 775 | |
| 1R | | | |
| 2F | 57 | 325 | |
| 2R | | | |
| 3AF | 57 | 850 | |
| 3AR | | | |
| 3BF | 57 | 700 | |
| 3BR |
F=forward; R=reverse; Pro – promoter. Bold and underlined sequences are those of the M13.
Primer sequences and annealing temperature β-globulin and myocilin fluorescent labeled primers.
| β-globulin-F | (6-FAM)AGCCTCGCCTTTGCCGA | 57 |
| β-globulin-R | CTGGTGCCTGGGGCG | |
| (6-FAM)TTTCTACGTGGAATTTGGACA | 59 | |
| GTAGGTGGGCTTGGGGTCT |
F=forward; R=reverse. The forward primers were labeled with 6-FAM.
Myocilin gene expression in POAG patients and controls.
| 47:26 | 7476 (4325) | 6839 (4271) | 0.55 | |
| β-globulin expression; mean (SD) | 44:24 | 109533 (31355) | 103885 (31047) | 0.48 |
| 42:23 | 0.0685 (0.0520) | 0.0667 (0.0597) | 0.90 | |
| 26:22 | 7132 (4526) | 7268 (4121) | 0.90 | |
| β-globulin expression in Caucasians; mean (SD) | 22:20 | 104941 (31552) | 99392 (32171) | 0.58 |
| 21:19 | 0.0622 (0.0487) | 0.0730 (0.0619) | 0.54 |
POAG=primary open angle glaucoma; MYOC=myocilin gene expression; SD=standard deviation.
Correlation between clinical parameters and MYOC/β-globulin ratios.
| Age in years | 0.204 | 0.21 |
| Sex | 0.040 | 0.81 |
| Ethnicity | 0.122 | 0.45 |
| Visual acuity OD | 0.016 | 0.92 |
| Visual acuity OS | 0.075 | 0.64 |
| Maximum IOP OD | 0.114 | 0.48 |
| Maximum IOP OS | 0.237 | 0.14 |
| Vertical c/d ratio OD | 0.129 | 0.43 |
| Vertical c/d ratio OS | 0.171 | 0.29 |
| MD OD | −0.042 | 0.80 |
| MD OS | −0.025 | 0.88 |
| PSD OD | 0.211 | 0.19 |
| PSD OS | 0.024 | 0.89 |
MYOC/β-globulin column contains correlation coefficients; OD=right eye; OS=left eye; IOP=intraocular pressure; c/d=cup to disk; MD=Humphrey visual field mean deviation; PSD=Humphrey visual field pattern standard deviation.