| Literature DB >> 21552501 |
Thomas M Bosley1, Ali Hellani, George L Spaeth, Jonathan Myers, L Jay Katz, Marlene R Moster, Barry Milcarek, Khaled K Abu-Amero.
Abstract
PURPOSE: Heterozygous optic atrophy type1 (OPA1) mutations are responsible for dominant optic atrophy, and the down regulation of OPA1 expression in patients with Leber hereditary optic neuropathy may imply that Opa1 protein levels in mitochondria play a role in other spontaneous optic neuropathies as well. Mitochondrial and metabolic abnormalities may put the optic nerve at risk in primary open angle glaucoma (POAG), and this preliminary study was designed to investigate whether altered OPA1 expression might be present in the progressive optic neuropathy of POAG.Entities:
Mesh:
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Year: 2011 PMID: 21552501 PMCID: PMC3086630
Source DB: PubMed Journal: Mol Vis ISSN: 1090-0535 Impact factor: 2.367
Primer sequences and annealing temperatures.
| (6-FAM) AGC CTC GCC TTT GCC GA | 57 | |
| CTG GTG CCT GGG GCG | | |
| (6-FAM) TGT GAG GTC TGC CAG TCT TTA | 58 | |
| TGT CCT TAA TTG GGG TCG TTG |
F=forward; R=reverse.
Figure 1Fluorescent PCR amplification. Capillary electrophoresis showing fluorescent PCR amplification of (A) the OPA1 gene (140 bp; blue peak) and (B) the HBB gene (175 bp) for a POAG patient. Similarly, (C) shows OPA1 amplification and (D) shows HBB amplification for a control individual. The x-axis represents peak size in base pairs (bp) and the y-axis the signal intensity. The area under the peak (not shown here) corresponds to gene expression levels and was measured by the GeneMapper software (Applied Biosystems). Sizing of the peaks was done by running the 500 pb LIZ size-ladder (peaks in orange) with the samples.
Gene expression in POAG patients and controls.
| 116714 (22220) | 137761 (47076) | 0.04 | |
| 104489 (33188) | 98164 (7707) | 0.24 | |
| 1.16 (0.26) | 1.41 (0.50) | 0.02 | |
| 112979 (15699) | 133460 (45261) | 0.04 | |
| 108507 (47291) | 98462 (7931) | 0.34 | |
| 1.12 (0.25) | 1.37 (0.50) | 0.04 |
POAG=primary open angle glaucoma; SD=standard deviation.
Correlation between OPA1/HBB and clinical parameters
| Age in years; mean (SD) | 67.93 (10.55) | 0.90 |
| Sex (M:F) | 26:17 | 0.10 |
| Ethnicity (C:AA) | 21:22 | 0.27 |
| Visual acuity OD (mean) | ~20/40 | 0.74 |
| Visual acuity OS (mean) | ~20/30 | 0.56 |
| Maximum IOP OD (mmHg) | 29.4 (6.3) | 0.07 |
| Maximum IOP OS (mmHg) | 29.7 (6.9) | 0.13 |
| Vertical c/d ratio OD; mean (SD) | 0.78 (0.21) | 0.84 |
| Vertical c/d ratio OS; mean (SD) | 0.76 (0.20) | 0.99 |
| MD OD; mean (SD) | −15.46 (10.28) | 0.28 |
| MD OS; mean (SD) | −13.27 (10.37) | 0.33 |
| PSD OD; mean (SD) | 7.52 (4.51) | 0.74 |
| PSD OS; mean (SD) | 7.01 (4.33) | 0.92 |
SD=standard deviation; M=male; F=female; C=Caucasian; AA=African American; OD=right eye; OS=left eye; IOP=intraocular pressure; mmHg=mm mercury; c/d=cup to disk; MD=Humphrey visual field mean deviation; PSD=Humphrey visual field pattern standard deviation.