| Literature DB >> 29845210 |
Hong-Wei Wang1, Peng Sun2, Yao Chen1, Li-Ping Jiang3, Hui-Ping Wu4, Wen Zhang5, Feng Gao6.
Abstract
Glaucoma is the leading cause of irreversible blindness globally. It is known that the incidence of glaucoma is closely associated with inheritance. A large number of studies have suggested that genetic factors are involved in the occurrence and development of glaucoma, and even affect the drug sensitivity and prognosis of glaucoma. In the present review, 22 loci of glaucoma are presented, including the relevant genes (myocilin, interleukin 20 receptor subunit B, optineurin, ankyrin repeat‑ and SOCS box‑containing protein 10, WD repeat‑containing protein 36, EGF‑containing fibulin‑like extracellular matrix protein 1, neurotrophin 4, TANK‑binding kinase 1, cytochrome P450 subfamily I polypeptide 1, latent transforming growth factor β binding protein 2 and TEK tyrosine kinase endothelial) and 74 other genes (including toll‑like receptor 4, sine oculis homeobox Drosophila homolog of 1, doublecortin‑like kinase 1, RE repeats‑encoding gene, retinitis pigmentosa GTPase regulator‑interacting protein, lysyl oxidase‑like protein 1, heat‑shock 70‑kDa protein 1A, baculoviral IAP repeat‑containing protein 6, 5,10‑methylenetetrahydrofolate reductase and nitric oxide synthase 3 and nanophthalmos 1) that are more closely associated with glaucoma. The pathogenesis of these glaucoma‑associated genes, glaucomatous genetics and genetic approaches, as well as glaucomatous risk factors, including increasing age, glaucoma family history, high myopia, diabetes, ocular trauma, smoking, intraocular pressure increase and/or fluctuation were also discussed.Entities:
Mesh:
Year: 2018 PMID: 29845210 PMCID: PMC6059695 DOI: 10.3892/mmr.2018.9071
Source DB: PubMed Journal: Mol Med Rep ISSN: 1791-2997 Impact factor: 2.952
Figure 1.General classifications of glaucoma. IH, intraocular hemorrhage.
Candidate genes and 22 loci associated with glaucoma.
| Authors, year | Locus name | Candidate gene | Location | Glaucoma subtype | Association with glaucoma | (Refs.)/OMIM no. |
|---|---|---|---|---|---|---|
| Faiq | GLC3A | CYP1B1 (P4501B1) | 8q24.3 | PCG, POAG | The most common pathogenesis of PCG; digenic pathogenic mechanism of CYP1B1 with MYOC and TEK, respectively; conferring increased susceptibility to PCG | ( |
| Stone | GLC1A (JOAG1) | MYOC (TIGR) | 1q24.3 | POAG, NTG, HTG, JOAG1 | Decreasing AH outflow; increasing IOP; obstructing neurite outgrowth; accumulation of abnormal MYOC protein that is harmful to TM cells | ( |
| – | GLC1B | – | 2cen-q13 | APOAG | Finding the disorder to GLC1B in adult-onset POAG | OMIM no.606689 |
| – | GLC1C | IL20RB | 3q21-q24 | POAG | Expressed in human TM, possibly pathogenic | OMIM no.605621 |
| – | GLC1D | – | 8q23 | POAG | Increased IOP preceded by optic neuropathy and visual field loss | OMIM no.602429 |
| Kumar | GLC1O | NTF4 | 19q13.33 | POAG | Significantly involved in POAG; possibly deriving from multiple ancestors | ( |
| Kumar | G LC1E | OPTN | 10p13 | POAG, NTG | Impairing autophagy and trafficking leading to death of retinal cells | ( |
| – | GLC1F | ASB10 | 7q36.1 | POAG | Influencing AH outflow; in TM cells, involved in the ubiquitin-mediated degradation pathways | OMIM no.615054 |
| Kumar | GLC1G | WDR36 | 5q22.1 | POAG, HTG | Widely expressed in many ocular tissues; a risk factor for POAG | ( |
| – | GLC1H | EFEMP1 | 2p16-p15 | POAG | Involved in decreasing the optic disc area | OMIM no.601548 |
| – | GLC1I | – | 15q11-q13 | POAG | Requires investigation | OMIM no.609745 |
| – | GLC1J (JOAG2) | – | 9q22 | JPOAG | Requires investigation | OMIM no.608695 |
| – | GLC1K (JOAG3) | – | 20p12 | JPOAG | Requires investigation | OMIM no.608696 |
| – | GLC1L | – | 3p22-p21 | Adult-onset | Requires investigation | OMIM no.137760 |
| GLC1M | – | 5q22.1-q32 | JOAG | Location between NRG2 and D5S2051; excluding NRG2 as the causative gene for GLC1M | OMIM no.610535 | |
| – | GLC1N | – | 15q22-q24 | JOAG | Requires investigation | OMIM no.611274 |
| Fingert | GLC1P | TBK1 | 12q14 | POAG | Requires investigation as a causative gene for GLC1P | ( |
| Porter | GLC1Q | – | 4q35.1-q35.2 | POAG | Requires investigation | ( |
| – | GLC3B | – | 1p36.2-p36.1 | PCG | Requires investigation | OMIM no.600975 |
| – | GLC3C | – | 14q24.3 | PCG | Requires investigation | OMIM no.613085 |
| Ali | GLC3D | LTBP2 | 14q24 | PCG, SG | Maintaining ciliary muscle tone; development of the anterior chamber of human eye | ( |
| – | GLC3E | TEK | 9p21.2 | PCG | Obstructing AH outflow and causing increased IOP | OMIM no.600221 |
EFEMP1 is unclear as a GLC1H gene. TIGR, trabecular meshwork-induced glucocorticoid response protein; POAG, primary open-angle glaucoma; NTG, normal tension glaucoma; HTG, high-tension glaucoma; JOAG, juvenile open angle glaucoma; AH, aqueous humor; IOP, intraocular pressure; TM, trabecular meshwork; JPOAG, juvenile POAG; PCG, primary congenital glaucoma; MYOC, myocilin; IL20RB, interleukin 20 receptor β; OPTN, optineurin; ASB10, ankyrin repeat- and SOCS box-containing protein 10; WDR36, WD repeat-containing protein 36; EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1; NTF4, neurotrophin 4; TBK1, TANK-binding kinase 1; CYP1B1, cytochrome P450 subfamily I polypeptide 1; LTBP2, latent transforming growth factor-β-binding protein 2; TEK, TEK tyrosine kinase endothelial; SG, secondary glaucoma.
Possible pathogenic or risk genes associated with glaucoma.
| Authors, year | Gene symbol (name) | Location/locus | Glaucoma subtype | Association with glaucoma | (Refs.) |
|---|---|---|---|---|---|
| Fuchshofer | TGF-β1 (Transforming growth factor, β-1) | 19q13.2 | POAG | Accelerating degeneration of the optic nerve axons | ( |
| Millá | LMX1B (LIM homeobox transcription factor 1, β) | 9q33.3 | OAG | Possibly pathogenic | ( |
| Vishal | MPP7 (Membrane protein, palmitoylated 7) | 10p12.1 | POAG | Affecting AH dynamics, highly expressed in human TM | ( |
| Al-Dabbagh | SMOC2 (SPARC-related modular calcium-binding protein 2) | 6q27 | PACG | Regulation of ECM and MMPs | ( |
| Chakrabarti | FOXC1/FKHL7 (Forkhead box C1) | 6p25.3 | PCG | Limited role in glaucoma pathogenesis; regulation of MYOC secretion; | ( |
| Moazzeni | PITX2 (Paired-like homeodomain transcription factor 2) | 4q25 | PCG | Affecting IOP | ( |
| Othman | NNO1 (Nanophthalmos1) | 11p | PACG | Possibly pathogenic | ( |
| Nongpiur | ABCC5 (ATP-binding cassette, subfamily C, member 5) | 3q27.1 | PACG | Affecting anterior chamber depth | ( |
| Simpson | TP63 (Tumor protein p63) | 3q28 | OAG | Possibly pathogenic | ( |
| Wu | MMP-9 (Matrix metalloproteinase 9) | 20q13.12 | PACG | Possibly protective and susceptibility to acute PACG | ( |
| Micheal | TP53BP2 (Tumor protein p53-binding protein 2) | 1q41 | POAG | Regulating RGC apoptosis, possibly pathogenic | ( |
| Liao | B4GALT3 (UDP-Gal: βGlcNAc β-1,4-galactosyltransferase polypeptide 3) | 1q23.3 | POAG | Possibly pathogenic | ( |
| Vithana | COL5A1 (Collagen, type V, α-1) | 9q34.3 | – | Affecting central corneal thickness, possible pathogenic | ( |
| Vithana | COL8A2 (Collagen, type VIII, α-2) | 1p34.3 | POAG | Affecting central corneal thickness, pathogenic | ( |
| Janssen | EDNRA (Endothelin receptor, type A) | 4q31.22-q31.23 | POAG | Possibly pathogenic, highly expressed in the aorta | ( |
| FBN1 (Fibrillin 1) | 15q21.1 | POAG | Possibly pathogenic, highly expressed in CBE | ( | |
| TLR4 (Toll-like receptor 4) | 9q33.1 | POAG, NTG | Possibly pathogenic, highly expressed in CBE PEXG | ( | |
| Tezel | TNF-α (Tumour necrosis factor α) | 6p21.33 | POAG | Apoptotic death of RGC, possible pathogenic | ( |
| Fujikawa | VAV2 (Vav2 oncogene) | 9q34.2 | POAG | Elevated IOP caused by VAV2 deficiency | ( |
| VAV3 (Vav 3 oncogene) | 1p13.3 | POAG | Additive effect with VAV2 on glaucomatous phenotype | ||
| Cao | CALCRL (Calcitonin receptor-like gene) | 2q32.1 | Acute PACG | Possibly pathogenic in acute; however, not chronic PACG | ( |
| Awadalla | MFRP (Membrane-type frizzled-related protein) | 11q23.3 | PACG | Tendency to be pathogenic | ( |
| Mabuchi | CDKN2B (Cyclin-dependent kinase inhibitor 2B) | 9p21.3 | NTG | Possibly affecting VCDR, related to glaucoma | ( |
| SIX1 (Sine oculis homeobox, | 14q23.1 | POAG, NTG HTG | Optic nerve degeneration in glaucoma | ||
| CHEK2 (Checkpoint kinase 2, | 22q12.1 | HTG | A genetic risk factor for glaucoma | ||
| ATOH7 (Atonal, | 10q21.3 | NTG | Possibly relevant, higher frequency in glaucoma | ||
| DCLK1 (Doublecortin-like kinase 1) | 13q13.3 | POAG, NTG HTG | Possibly pathogenic; however, not up to development of glaucoma | ||
| RERE (RE repeats-encoding gene) | 1p36.23 | POAG, NTG HTG | Possibly pathogenic; however, not up to development of glaucoma | ||
| Junglas | TGF-β2/TGFB2 (Transforming growth factor, β-2) | 1q41 | POAG | Higher amounts in AH of glaucoma | ( |
| CTGF (Connective tissue growth factor) | 6q23.2 | POAG | Modification of TM actin cytoskeleton, increasing IOP | ||
| Wang | TNF-α/TNFA/TNF (Tumor necrosis factor α) | 6p21.33 | POAG | Possibly protective factor in the development of glaucoma | ( |
| Dursun | MBL-2 (Lectin, mannose-binding, soluble, 2) | 10q21.1 | POAG | Higher MBL-2 serum levels in glaucoma | ( |
| Kang | NOS3 (Nitric oxide synthase 3) | 7q36.1 | POAG | Interactions of reproductive factors with glaucomatous pathogenesis | ( |
| Awadalla | HGF (Hepatocyte growth factor) | 7q21.11 | PACG | Significantly associated with glaucoma | ( |
| Wittström | BEST1 (Bestrophin 1) | 11q12.3 | ACG | Anterior segment abnormality, shallow anterior chambers and reduced axial lengths | ( |
| Fernández-Martínez | RPGRIP1 (Retinitis pigmentosa | 14q11.2 | POAG, | Increasing the susceptibility to various | ( |
| 2011 | GTPase regulator-interacting protein) | NTG JOAG | types of glaucoma and possible pathogenic | ||
| Mookherjee | IL-1β (Interleukin 1-β) | 2q14.1 | HTG | A risk to glaucoma | ( |
| IL-1α (Interleukin 1-α) | 2q14.1 | HTG | Little association with glaucoma | ||
| Zhou | CARD10 (Caspase recruitment domain-containing protein 10) | 22q13.1 | POAG | Possibly pathogenic | ( |
| Álvarez | LOXL1 (Lysyl oxidase-like 1) | 15q24.1 | PEXG, PCG | Possibly pathogenic | ( |
| Khawaja | Mitochondrial gene mutations | – | POAG, NTG, HTG, PACG | Pathogenic | ( |
| Bailey | TXNRD2 (Thioredoxin reductase 2) | 22q11.21 | POAG | Causing RGC apoptosis and mitochondrial dysfunction | ( |
| ATXN2 (Ataxin 2) | 12q24.12 | POAG | Neurodegeneration, pathogenic | ( | |
| Lascaratos | MFN1 (Mitofusin 1) | – | POAG | Susceptibility to glaucoma | ( |
| MFN2 (Mitofusin 2) | 1p36.22 | POAG | Susceptibility to glaucoma | ||
| PARL (Presenilin-associated rhomboid-like protein) | 3q27.1 | POAG | Susceptibility to glaucoma | ||
| GST/SLCO6A1 (Gonad-specific transporter) | 5q21.1 | POAG | Susceptibility to glaucoma | ||
| SOD2 (Superoxide dismutase 2) | 6q25.3 | POAG | Development of glaucoma | ||
| Liu | MIR182 (MicroRNA 182) | 7q32.2 | POAG (HTG) | Possibly pathogenic | ( |
| Chandra | CYP46A1 (Cytochrome P450, family 46, subfamily A, polypeptide 1) | 14q32.2 | POAG | Risk prediction | ( |
| Shah | SIX6 (Sine oculis homeobox, | 14q23.1 | POAG | Susceptibility to glaucoma; increasing VCDR; enhanced risk by p16INK4a to glaucoma | ( |
| Skowronska-Krawczyk | CDKN2A/p16(INK4a) (Cyclin-dependent kinase inhibitor 2A) | 9p21.3 | POAG | Possibly pathogenic; leading to RGC senescence | ( |
| Shin | GALC (Galactosylceramidase) | 14q31.3 | POAG | Possibly pathogenic | ( |
| Nowak | BDNF (Brain-derived neurotrophic factor) | 11p14.1 | POAG | Possibly pathogenic | ( |
| Janssen | APOE (Apolipoprotein E) | 19q13.32 | POAG, NTG | Possibly pathogenic; decreasing NTG risk | ( |
| Chen | ABCA1 (ATP-binding cassette, subfamily A, member 1) | 9q31.1 | POAG | Development of glaucoma | ( |
| Ayub | ENOS (Nitric oxide synthase 3) | 7q36.1 | PACG, POAG | Significantly associated with glaucoma | ( |
| Nowak | HSP70-1 (Heat-shock 70-kD protein 1A) | 6p21.33 | POAG, PACG NTG | Possibly pathogenic | ( |
| Carbone | PDIA5 (Protein disulfide isomerase, family A, member 5) | 3q21.1 | POAG | Possibly pathogenic | ( |
| Carbone | BIRC6 (Baculoviral IAP repeat-containing protein 6) | 2p22.3 | POAG, PEXG | Possibly protective | ( |
| Chen | PLEKHA7 (Pleckstrin homology domain-containing protein, family A, member 7) | 11p15.2-p15.1 | PACG | Conferring significant risk for acute glaucoma | ( |
| COL11A1 (Collagen, type XI, α-1) | 1p21.1 | PACG | Conferring significant risk for acute glaucoma | ( | |
| Cuchra | APE1/APEX1 (Apex nuclease 1) | 14q11.2 | POAG | Expressed in RGC, TM; possibly decreasing the risk of POAG progression | ( |
| Janssen | CAV1 (Caveolin 1) | 7q31.2 | POAG | Glaucomatous alterations in TM | ( |
| Surgucheva | CAV2 (Caveolin 2) | 7q31.2 | POAG | Expressed in TM and RGC | ( |
| Lascaratos | OPA1 (Optic atrophy 1) | 3q29 | NTG | A strong risk for glaucoma and causing optic atrophy | ( |
| Mossböck | PAI-1 [Serpin peptidase inhibitor, clade E (NEXIN plasminogen activator inhibitor type 1, member 1] | 7q22.1 | POAG | Decreasing proteolysis of ECM in TM and possibly increasing IOP | ( |
| Wang | SAA2 (Serum amyloid A2) | 11p15.1 | – | Increasing IOP and possibly causing pathogenic alterations to TM in glaucoma. | ( |
| Micheal | PRPF8 (Precursor mRNA-processing factor 8, | 17p13.3 | POAG | Pathogenic | ( |
| Woo | MTHFR (5,10-methylenetetrahydrofolate reductase) | 1p36.22 | NTG, POAG | A genetic risk to glaucoma | ( |
| Bhattacharya | COCH (Cochlin) | 14q12 | POAG | Increasing IOP, causing TM cell aggregation, impeding AH outflow | ( |
| Bhattacharya | PADI2 (peptidyl arginine deiminase, type II) | 1p36.13 | POAG | Increasing in glaucomatous optic nerve | ( |
| Vishal | MMP-7 (membrane protein palmitoylated 7) | 11q22.2 | POAG | Influencing the aqueous humor dynamics; highly expressed in the human TM cells | ( |
| Lu | FNDC3B (Fibronectin type III domain-containing protein 3B) | 3q26.31 | POAG | Significantly associated with POAG risk | ( |
International Radiation Hybrid Mapping Consortium. POAG, primary open-angle glaucoma; PACG, primary angle-closure glaucoma; PCG, primary congenital glaucoma; AH, aqueous humor; TM, trabecular meshwork; ECM, extracellular matrix; MMP, matrix metalloproteinase; IOP, intraocular pressure; RGC, retinal ganglion cell; NTG, normal tension glaucoma; PEXG, pseudoexfoliation glaucoma; HTG, high-tension glaucoma; VCDR, vertical cup/disc ratio; JOAG, juvenile open angle glaucoma.