Literature DB >> 22550359

The double-helix microscope super-resolves extended biological structures by localizing single blinking molecules in three dimensions with nanoscale precision.

Hsiao-Lu D Lee, Steffen J Sahl, Matthew D Lew, W E Moerner.   

Abstract

The double-helix point spread function microscope encodes the axial (z) position information of single emitters in wide-field (x,y) images, thus enabling localization in three dimensions (3D) inside extended volumes. We experimentally determine the statistical localization precision σ of this approach using single emitters in a cell under typical background conditions, demonstrating σ < 20 nm laterally and <30 nm axially for N ≈ 1180 photons per localization. Combined with light-induced blinking of single-molecule labels, we present proof-of-concept imaging beyond the optical diffraction limit of microtubule network structures in fixed mammalian cells over a large axial range in three dimensions.

Entities:  

Year:  2012        PMID: 22550359      PMCID: PMC3338582          DOI: 10.1063/1.3700446

Source DB:  PubMed          Journal:  Appl Phys Lett        ISSN: 0003-6951            Impact factor:   3.791


  29 in total

1.  Precise nanometer localization analysis for individual fluorescent probes.

Authors:  Russell E Thompson; Daniel R Larson; Watt W Webb
Journal:  Biophys J       Date:  2002-05       Impact factor: 4.033

2.  Simultaneous imaging of different focal planes in fluorescence microscopy for the study of cellular dynamics in three dimensions.

Authors:  Prashant Prabhat; Sripad Ram; E Sally Ward; Raimund J Ober
Journal:  IEEE Trans Nanobioscience       Date:  2004-12       Impact factor: 2.935

3.  Interferometric fluorescent super-resolution microscopy resolves 3D cellular ultrastructure.

Authors:  Gleb Shtengel; James A Galbraith; Catherine G Galbraith; Jennifer Lippincott-Schwartz; Jennifer M Gillette; Suliana Manley; Rachid Sougrat; Clare M Waterman; Pakorn Kanchanawong; Michael W Davidson; Richard D Fetter; Harald F Hess
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-06       Impact factor: 11.205

4.  High-efficiency rotating point spread functions.

Authors:  Sri Rama Prasanna Pavani; Rafael Piestun
Journal:  Opt Express       Date:  2008-03-03       Impact factor: 3.894

5.  Three-dimensional sub-100 nm resolution fluorescence microscopy of thick samples.

Authors:  Manuel F Juette; Travis J Gould; Mark D Lessard; Michael J Mlodzianoski; Bhupendra S Nagpure; Brian T Bennett; Samuel T Hess; Joerg Bewersdorf
Journal:  Nat Methods       Date:  2008-05-11       Impact factor: 28.547

6.  Two-color nanoscopy of three-dimensional volumes by 4Pi detection of stochastically switched fluorophores.

Authors:  Daniel Aquino; Andreas Schönle; Claudia Geisler; Claas V Middendorff; Christian A Wurm; Yosuke Okamura; Thorsten Lang; Stefan W Hell; Alexander Egner
Journal:  Nat Methods       Date:  2011-03-13       Impact factor: 28.547

7.  Performance limits on three-dimensional particle localization in photon-limited microscopy.

Authors:  Ginni Grover; Sri Rama Prasanna Pavani; Rafael Piestun
Journal:  Opt Lett       Date:  2010-10-01       Impact factor: 3.776

8.  Superresolution imaging of targeted proteins in fixed and living cells using photoactivatable organic fluorophores.

Authors:  Hsiao-lu D Lee; Samuel J Lord; Shigeki Iwanaga; Ke Zhan; Hexin Xie; Jarrod C Williams; Hui Wang; Grant R Bowman; Erin D Goley; Lucy Shapiro; Robert J Twieg; Jianghong Rao; W E Moerner
Journal:  J Am Chem Soc       Date:  2010-11-03       Impact factor: 15.419

9.  Localizing and tracking single nanoscale emitters in three dimensions with high spatiotemporal resolution using a double-helix point spread function.

Authors:  Michael A Thompson; Matthew D Lew; Majid Badieirostami; W E Moerner
Journal:  Nano Lett       Date:  2010-01       Impact factor: 11.189

10.  Confined activation and subdiffractive localization enables whole-cell PALM with genetically expressed probes.

Authors:  Andrew G York; Alireza Ghitani; Alipasha Vaziri; Michael W Davidson; Hari Shroff
Journal:  Nat Methods       Date:  2011-02-13       Impact factor: 28.547

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  17 in total

Review 1.  Three-Dimensional Localization of Single Molecules for Super-Resolution Imaging and Single-Particle Tracking.

Authors:  Lexy von Diezmann; Yoav Shechtman; W E Moerner
Journal:  Chem Rev       Date:  2017-02-02       Impact factor: 60.622

2.  Simultaneous, accurate measurement of the 3D position and orientation of single molecules.

Authors:  Mikael P Backlund; Matthew D Lew; Adam S Backer; Steffen J Sahl; Ginni Grover; Anurag Agrawal; Rafael Piestun; W E Moerner
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-05       Impact factor: 11.205

3.  A bisected pupil for studying single-molecule orientational dynamics and its application to three-dimensional super-resolution microscopy.

Authors:  Adam S Backer; Mikael P Backlund; Alexander R von Diezmann; Steffen J Sahl; W E Moerner
Journal:  Appl Phys Lett       Date:  2014-05-12       Impact factor: 3.791

Review 4.  Deep learning in single-molecule microscopy: fundamentals, caveats, and recent developments [Invited].

Authors:  Leonhard Möckl; Anish R Roy; W E Moerner
Journal:  Biomed Opt Express       Date:  2020-02-27       Impact factor: 3.732

5.  A Protocol for Real-time 3D Single Particle Tracking.

Authors:  Shangguo Hou; Kevin Welsher
Journal:  J Vis Exp       Date:  2018-01-03       Impact factor: 1.355

Review 6.  The role of molecular dipole orientation in single-molecule fluorescence microscopy and implications for super-resolution imaging.

Authors:  Mikael P Backlund; Matthew D Lew; Adam S Backer; Steffen J Sahl; W E Moerner
Journal:  Chemphyschem       Date:  2013-12-30       Impact factor: 3.102

7.  The double-helix point spread function enables precise and accurate measurement of 3D single-molecule localization and orientation.

Authors:  Mikael P Backlund; Matthew D Lew; Adam S Backer; Steffen J Sahl; Ginni Grover; Anurag Agrawal; Rafael Piestun; W E Moerner
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2013-02-22

Review 8.  Super-resolution fluorescence imaging with single molecules.

Authors:  Steffen J Sahl; W E Moerner
Journal:  Curr Opin Struct Biol       Date:  2013-08-08       Impact factor: 6.809

9.  Optimal point spread function design for 3D imaging.

Authors:  Yoav Shechtman; Steffen J Sahl; Adam S Backer; W E Moerner
Journal:  Phys Rev Lett       Date:  2014-09-26       Impact factor: 9.161

10.  Cellular inclusion bodies of mutant huntingtin exon 1 obscure small fibrillar aggregate species.

Authors:  Steffen J Sahl; Lucien E Weiss; Whitney C Duim; Judith Frydman; W E Moerner
Journal:  Sci Rep       Date:  2012-11-28       Impact factor: 4.379

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