Literature DB >> 20000821

Localizing and tracking single nanoscale emitters in three dimensions with high spatiotemporal resolution using a double-helix point spread function.

Michael A Thompson1, Matthew D Lew, Majid Badieirostami, W E Moerner.   

Abstract

Three-dimensional nanoscale localization and tracking of dim single emitters can be obtained with a widefield fluorescence microscope exhibiting a double-helix point spread function (DH-PSF). We describe in detail how the localization precision quantitatively depends upon the number of photons detected and the z position of the nanoscale emitter, thereby showing a approximately 10 nm localization capability along x, y, and z in the limit of weak emitters. Experimental measurements are compared to Fisher information calculations of the ultimate localization precision inherent in the DH-PSF. The DH-PSF, for the first time, is used to track single quantum dots in aqueous solution and a quantum dot-labeled structure inside a living cell in three dimensions.

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Mesh:

Year:  2010        PMID: 20000821      PMCID: PMC2806512          DOI: 10.1021/nl903295p

Source DB:  PubMed          Journal:  Nano Lett        ISSN: 1530-6984            Impact factor:   11.189


  27 in total

1.  Precise nanometer localization analysis for individual fluorescent probes.

Authors:  Russell E Thompson; Daniel R Larson; Watt W Webb
Journal:  Biophys J       Date:  2002-05       Impact factor: 4.033

2.  Depth from diffracted rotation.

Authors:  Adam Greengard; Yoav Y Schechner; Rafael Piestun
Journal:  Opt Lett       Date:  2006-01-15       Impact factor: 3.776

3.  Interferometric fluorescent super-resolution microscopy resolves 3D cellular ultrastructure.

Authors:  Gleb Shtengel; James A Galbraith; Catherine G Galbraith; Jennifer Lippincott-Schwartz; Jennifer M Gillette; Suliana Manley; Rachid Sougrat; Clare M Waterman; Pakorn Kanchanawong; Michael W Davidson; Richard D Fetter; Harald F Hess
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-06       Impact factor: 11.205

4.  High-efficiency rotating point spread functions.

Authors:  Sri Rama Prasanna Pavani; Rafael Piestun
Journal:  Opt Express       Date:  2008-03-03       Impact factor: 3.894

5.  High accuracy 3D quantum dot tracking with multifocal plane microscopy for the study of fast intracellular dynamics in live cells.

Authors:  Sripad Ram; Prashant Prabhat; Jerry Chao; E Sally Ward; Raimund J Ober
Journal:  Biophys J       Date:  2008-10-03       Impact factor: 4.033

6.  Three-dimensional sub-100 nm resolution fluorescence microscopy of thick samples.

Authors:  Manuel F Juette; Travis J Gould; Mark D Lessard; Michael J Mlodzianoski; Bhupendra S Nagpure; Brian T Bennett; Samuel T Hess; Joerg Bewersdorf
Journal:  Nat Methods       Date:  2008-05-11       Impact factor: 28.547

7.  A photoactivatable push-pull fluorophore for single-molecule imaging in live cells.

Authors:  Samuel J Lord; Nicholas R Conley; Hsiao-lu D Lee; Reichel Samuel; Na Liu; Robert J Twieg; W E Moerner
Journal:  J Am Chem Soc       Date:  2008-06-24       Impact factor: 15.419

8.  Parallax: high accuracy three-dimensional single molecule tracking using split images.

Authors:  Yujie Sun; Jennine Dawicki McKenna; John M Murray; E Michael Ostap; Yale E Goldman
Journal:  Nano Lett       Date:  2009-07       Impact factor: 11.189

9.  Cy3-Cy5 covalent heterodimers for single-molecule photoswitching.

Authors:  Nicholas R Conley; Julie S Biteen; W E Moerner
Journal:  J Phys Chem B       Date:  2008-08-28       Impact factor: 2.991

10.  Whole-cell 3D STORM reveals interactions between cellular structures with nanometer-scale resolution.

Authors:  Bo Huang; Sara A Jones; Boerries Brandenburg; Xiaowei Zhuang
Journal:  Nat Methods       Date:  2008-11-23       Impact factor: 28.547

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  58 in total

1.  Three-dimensional tracking of single mRNA particles in Saccharomyces cerevisiae using a double-helix point spread function.

Authors:  Michael A Thompson; Jason M Casolari; Majid Badieirostami; Patrick O Brown; W E Moerner
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-04       Impact factor: 11.205

2.  Three-dimensional superresolution colocalization of intracellular protein superstructures and the cell surface in live Caulobacter crescentus.

Authors:  Matthew D Lew; Steven F Lee; Jerod L Ptacin; Marissa K Lee; Robert J Twieg; Lucy Shapiro; W E Moerner
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-26       Impact factor: 11.205

3.  Optimal 3D single-molecule localization for superresolution microscopy with aberrations and engineered point spread functions.

Authors:  Sean Quirin; Sri Rama Prasanna Pavani; Rafael Piestun
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-30       Impact factor: 11.205

4.  Single-image diffusion coefficient measurements of proteins in free solution.

Authors:  Shannon Kian Zareh; Michael C DeSantis; Jonathan M Kessler; Je-Luen Li; Y M Wang
Journal:  Biophys J       Date:  2012-04-03       Impact factor: 4.033

5.  Statistical deconvolution for superresolution fluorescence microscopy.

Authors:  Eran A Mukamel; Hazen Babcock; Xiaowei Zhuang
Journal:  Biophys J       Date:  2012-05-15       Impact factor: 4.033

6.  Analytical tools to distinguish the effects of localization error, confinement, and medium elasticity on the velocity autocorrelation function.

Authors:  Stephanie C Weber; Michael A Thompson; W E Moerner; Andrew J Spakowitz; Julie A Theriot
Journal:  Biophys J       Date:  2012-06-05       Impact factor: 4.033

Review 7.  Probing cellular events, one quantum dot at a time.

Authors:  Fabien Pinaud; Samuel Clarke; Assa Sittner; Maxime Dahan
Journal:  Nat Methods       Date:  2010-03-30       Impact factor: 28.547

8.  Time-resolved three-dimensional molecular tracking in live cells.

Authors:  Nathan P Wells; Guillaume A Lessard; Peter M Goodwin; Mary E Phipps; Patrick J Cutler; Diane S Lidke; Bridget S Wilson; James H Werner
Journal:  Nano Lett       Date:  2010-11-10       Impact factor: 11.189

9.  Three-dimensional localization precision of the double-helix point spread function versus astigmatism and biplane.

Authors:  Majid Badieirostami; Matthew D Lew; Michael A Thompson; W E Moerner
Journal:  Appl Phys Lett       Date:  2010-10-18       Impact factor: 3.791

10.  Single-Molecule Tracking and Its Application in Biomolecular Binding Detection.

Authors:  Cong Liu; Yen-Liang Liu; Evan P Perillo; Andrew K Dunn; Hsin-Chih Yeh
Journal:  IEEE J Sel Top Quantum Electron       Date:  2016-05-17       Impact factor: 4.544

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