Literature DB >> 22543302

Re-entrant melting as a design principle for DNA-coated colloids.

Stefano Angioletti-Uberti1, Bortolo M Mognetti, Daan Frenkel.   

Abstract

Colloids functionalized with DNA hold great promise as building blocks for complex self-assembling structures. However, the practical use of DNA-coated colloids (DNACCs) has been limited by the narrowness of the temperature window where the target structures are both thermodynamically stable and kinetically accessible. Here we propose a strategy to design DNACCs, whereby the colloidal suspensions crystallize on cooling and then melt on further cooling. In a phase diagram with such a re-entrant melting, kinetic trapping of the system in non-target structures should be strongly suppressed. We present model calculations and simulations that show that real DNA sequences exist that should bestow this unusual phase behaviour on suitably functionalized colloidal suspensions. We present our results for binary systems, but the concepts that we develop apply to multicomponent systems and should therefore open the way towards the design of truly complex self-assembling colloidal structures.

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Year:  2012        PMID: 22543302     DOI: 10.1038/nmat3314

Source DB:  PubMed          Journal:  Nat Mater        ISSN: 1476-1122            Impact factor:   43.841


  21 in total

1.  Efficient, multiple-range random walk algorithm to calculate the density of states.

Authors:  F Wang; D P Landau
Journal:  Phys Rev Lett       Date:  2001-03-05       Impact factor: 9.161

2.  Colloidal interactions and self-assembly using DNA hybridization.

Authors:  Paul L Biancaniello; Anthony J Kim; John C Crocker
Journal:  Phys Rev Lett       Date:  2005-02-10       Impact factor: 9.161

3.  Surface and bulk dissolution properties, and selectivity of DNA-linked nanoparticle assemblies.

Authors:  D B Lukatsky; Daan Frenkel
Journal:  J Chem Phys       Date:  2005-06-01       Impact factor: 3.488

4.  A general framework for non-Boltzmann Monte Carlo sampling.

Authors:  Charlles R A Abreu; Fernando A Escobedo
Journal:  J Chem Phys       Date:  2006-02-07       Impact factor: 3.488

5.  DNA-guided crystallization of colloidal nanoparticles.

Authors:  Dmytro Nykypanchuk; Mathew M Maye; Daniel van der Lelie; Oleg Gang
Journal:  Nature       Date:  2008-01-31       Impact factor: 49.962

6.  Accurate determination of crystal structures based on averaged local bond order parameters.

Authors:  Wolfgang Lechner; Christoph Dellago
Journal:  J Chem Phys       Date:  2008-09-21       Impact factor: 3.488

7.  Simple quantitative model for the reversible association of DNA coated colloids.

Authors:  Rémi Dreyfus; Mirjam E Leunissen; Roujie Sha; Alexei V Tkachenko; Nadrian C Seeman; David J Pine; Paul M Chaikin
Journal:  Phys Rev Lett       Date:  2009-01-27       Impact factor: 9.161

8.  Model for assembly and gelation of four-armed DNA dendrimers.

Authors:  Francis W Starr; Francesco Sciortino
Journal:  J Phys Condens Matter       Date:  2006-06-19       Impact factor: 2.333

9.  Design rule for colloidal crystals of DNA-functionalized particles.

Authors:  Francisco J Martinez-Veracoechea; Bianca M Mladek; Alexei V Tkachenko; Daan Frenkel
Journal:  Phys Rev Lett       Date:  2011-07-20       Impact factor: 9.161

10.  DINAMelt web server for nucleic acid melting prediction.

Authors:  Nicholas R Markham; Michael Zuker
Journal:  Nucleic Acids Res       Date:  2005-07-01       Impact factor: 16.971

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  18 in total

1.  Colloidal self-assembly: Melting also on cooling.

Authors:  Oleg Gang
Journal:  Nat Mater       Date:  2012-05-22       Impact factor: 43.841

2.  Selective transformations between nanoparticle superlattices via the reprogramming of DNA-mediated interactions.

Authors:  Yugang Zhang; Suchetan Pal; Babji Srinivasan; Thi Vo; Sanat Kumar; Oleg Gang
Journal:  Nat Mater       Date:  2015-05-25       Impact factor: 43.841

3.  Colloidal self-assembly: Programmable competitive binding.

Authors:  Pep Pàmies
Journal:  Nat Mater       Date:  2015-04       Impact factor: 43.841

4.  Arrested demixing opens route to bigels.

Authors:  Francesco Varrato; Lorenzo Di Michele; Maxim Belushkin; Nicolas Dorsaz; Simon H Nathan; Erika Eiser; Giuseppe Foffi
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-05       Impact factor: 11.205

5.  Derivation of nearest-neighbor DNA parameters in magnesium from single molecule experiments.

Authors:  Josep Maria Huguet; Marco Ribezzi-Crivellari; Cristiano Valim Bizarro; Felix Ritort
Journal:  Nucleic Acids Res       Date:  2017-12-15       Impact factor: 16.971

6.  The Role of Structural Enthalpy in Spherical Nucleic Acid Hybridization.

Authors:  Lam-Kiu Fong; Ziwei Wang; George C Schatz; Erik Luijten; Chad A Mirkin
Journal:  J Am Chem Soc       Date:  2018-05-15       Impact factor: 15.419

7.  DNA self-organization controls valence in programmable colloid design.

Authors:  Angus McMullen; Sascha Hilgenfeldt; Jasna Brujic
Journal:  Proc Natl Acad Sci U S A       Date:  2021-11-16       Impact factor: 11.205

8.  Assembly of three-dimensional binary superlattices from multi-flavored particles.

Authors:  Evan Pretti; Hasan Zerze; Minseok Song; Yajun Ding; Nathan A Mahynski; Harold W Hatch; Vincent K Shen; Jeetain Mittal
Journal:  Soft Matter       Date:  2018-08-01       Impact factor: 3.679

9.  Phase behavior and critical activated dynamics of limited-valence DNA nanostars.

Authors:  Silvia Biffi; Roberto Cerbino; Francesca Bomboi; Elvezia Maria Paraboschi; Rosanna Asselta; Francesco Sciortino; Tommaso Bellini
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-09       Impact factor: 11.205

10.  Organized plasmonic clusters with high coordination number and extraordinary enhancement in surface-enhanced Raman scattering (SERS).

Authors:  Nicolas Pazos-Perez; Claudia Simone Wagner; Jose M Romo-Herrera; Luis M Liz-Marzán; F Javier García de Abajo; Alexander Wittemann; Andreas Fery; Ramón A Alvarez-Puebla
Journal:  Angew Chem Int Ed Engl       Date:  2012-11-04       Impact factor: 15.336

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