Literature DB >> 22541757

Nuclear bodies: multifunctional companions of the genome.

Miroslav Dundr1.   

Abstract

It has become increasingly apparent that gene expression is regulated by the functional interplay between spatial genome organization and nuclear architecture. Within the nuclear environment a variety of distinct nuclear bodies exist. They are dynamic, self-organizing structures that do not assemble as pre-formed entities but rather emerge as a direct reflection of specific activities associated with gene expression and genome maintenance. Here I summarize recent findings on functions of some of the most prominent nuclear bodies, including the nucleolus, Cajal body, PML nuclear body, Polycomb group body and the 53BP1 nuclear body. The emerging view is that their organization is orchestrated by similar principles, and they function in fundamental cellular processes involved in homeostasis, differentiation, development and disease.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22541757      PMCID: PMC3372688          DOI: 10.1016/j.ceb.2012.03.010

Source DB:  PubMed          Journal:  Curr Opin Cell Biol        ISSN: 0955-0674            Impact factor:   8.382


  54 in total

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Journal:  Genes Dev       Date:  2011-01-01       Impact factor: 11.361

4.  KAP1 depletion increases PML nuclear body number in concert with ultrastructural changes in chromatin.

Authors:  Rosemarie Kepkay; Kathleen M Attwood; Yael Ziv; Yosef Shiloh; Graham Dellaire
Journal:  Cell Cycle       Date:  2011-01-15       Impact factor: 4.534

Review 5.  SMN and Gemins: 'we are family' … or are we?: insights into the partnership between Gemins and the spinal muscular atrophy disease protein SMN.

Authors:  Ruben J Cauchi
Journal:  Bioessays       Date:  2010-10-15       Impact factor: 4.345

6.  WRAP53 is essential for Cajal body formation and for targeting the survival of motor neuron complex to Cajal bodies.

Authors:  Salah Mahmoudi; Sofia Henriksson; Irene Weibrecht; Stephen Smith; Ola Söderberg; Staffan Strömblad; Klas G Wiman; Marianne Farnebo
Journal:  PLoS Biol       Date:  2010-11-02       Impact factor: 8.029

Review 7.  The Polycomb complex PRC2 and its mark in life.

Authors:  Raphaël Margueron; Danny Reinberg
Journal:  Nature       Date:  2011-01-20       Impact factor: 49.962

8.  Polycomb-dependent regulatory contacts between distant Hox loci in Drosophila.

Authors:  Frédéric Bantignies; Virginie Roure; Itys Comet; Benjamin Leblanc; Bernd Schuettengruber; Jérôme Bonnet; Vanessa Tixier; André Mas; Giacomo Cavalli
Journal:  Cell       Date:  2011-01-21       Impact factor: 41.582

9.  Direct visualization of the co-transcriptional assembly of a nuclear body by noncoding RNAs.

Authors:  Yuntao S Mao; Hongjae Sunwoo; Bin Zhang; David L Spector
Journal:  Nat Cell Biol       Date:  2010-12-19       Impact factor: 28.824

10.  Core transcription factors, Oct4, Sox2 and Nanog, individually form complexes with nucleophosmin (Npm1) to control embryonic stem (ES) cell fate determination.

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Journal:  Aging (Albany NY)       Date:  2010-11       Impact factor: 5.682

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  73 in total

Review 1.  Heterochromatin instability in cancer: from the Barr body to satellites and the nuclear periphery.

Authors:  Dawn M Carone; Jeanne B Lawrence
Journal:  Semin Cancer Biol       Date:  2012-06-18       Impact factor: 15.707

2.  Phosphorylation-mediated RNA/peptide complex coacervation as a model for intracellular liquid organelles.

Authors:  William M Aumiller; Christine D Keating
Journal:  Nat Chem       Date:  2015-12-21       Impact factor: 24.427

Review 3.  Actin, actin-binding proteins, and actin-related proteins in the nucleus.

Authors:  Ildikó Kristó; Izabella Bajusz; Csaba Bajusz; Péter Borkúti; Péter Vilmos
Journal:  Histochem Cell Biol       Date:  2016-02-04       Impact factor: 4.304

4.  Epigenetics and chromatin plasticity in embryonic stem cells.

Authors:  Terézia Přikrylová; Jiří Pacherník; Stanislav Kozubek; Eva Bártová
Journal:  World J Stem Cells       Date:  2013-07-26       Impact factor: 5.326

5.  Coilin is rapidly recruited to UVA-induced DNA lesions and γ-radiation affects localized movement of Cajal bodies.

Authors:  Eva Bártová; Veronika Foltánková; Soňa Legartová; Petra Sehnalová; Dmitry V Sorokin; Jana Suchánková; Stanislav Kozubek
Journal:  Nucleus       Date:  2014-05-23       Impact factor: 4.197

Review 6.  Cell Biology of the Caenorhabditis elegans Nucleus.

Authors:  Orna Cohen-Fix; Peter Askjaer
Journal:  Genetics       Date:  2017-01       Impact factor: 4.562

Review 7.  PML nuclear bodies: assembly and oxidative stress-sensitive sumoylation.

Authors:  Umut Sahin; Hugues de Thé; Valérie Lallemand-Breitenbach
Journal:  Nucleus       Date:  2014       Impact factor: 4.197

8.  Nucleolus-tethering system (NoTS).

Authors:  Yin Liu; Yuda Fang
Journal:  Nucleus       Date:  2014 Jul-Aug       Impact factor: 4.197

Review 9.  The Cajal body and the nucleolus: "In a relationship" or "It's complicated"?

Authors:  Laura Trinkle-Mulcahy; Judith E Sleeman
Journal:  RNA Biol       Date:  2016-09-23       Impact factor: 4.652

10.  The 4D nucleome project.

Authors:  Job Dekker; Andrew S Belmont; Mitchell Guttman; Victor O Leshyk; John T Lis; Stavros Lomvardas; Leonid A Mirny; Clodagh C O'Shea; Peter J Park; Bing Ren; Joan C Ritland Politz; Jay Shendure; Sheng Zhong
Journal:  Nature       Date:  2017-09-13       Impact factor: 49.962

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