Literature DB >> 22536009

Estimation of time-delayed mutual information and bias for irregularly and sparsely sampled time-series.

D J Albers1, George Hripcsak.   

Abstract

A method to estimate the time-dependent correlation via an empirical bias estimate of the time-delayed mutual information for a time-series is proposed. In particular, the bias of the time-delayed mutual information is shown to often be equivalent to the mutual information between two distributions of points from the same system separated by infinite time. Thus intuitively, estimation of the bias is reduced to estimation of the mutual information between distributions of data points separated by large time intervals. The proposed bias estimation techniques are shown to work for Lorenz equations data and glucose time series data of three patients from the Columbia University Medical Center database.

Entities:  

Year:  2012        PMID: 22536009      PMCID: PMC3332129          DOI: 10.1016/j.chaos.2012.03.003

Source DB:  PubMed          Journal:  Chaos Solitons Fractals        ISSN: 0960-0779            Impact factor:   5.944


  6 in total

1.  Estimating mutual information.

Authors:  Alexander Kraskov; Harald Stögbauer; Peter Grassberger
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2004-06-23

2.  Using time-delayed mutual information to discover and interpret temporal correlation structure in complex populations.

Authors:  D J Albers; George Hripcsak
Journal:  Chaos       Date:  2012-03       Impact factor: 3.642

3.  The "meaningful use" regulation for electronic health records.

Authors:  David Blumenthal; Marilyn Tavenner
Journal:  N Engl J Med       Date:  2010-07-13       Impact factor: 91.245

4.  Independent coordinates for strange attractors from mutual information.

Authors: 
Journal:  Phys Rev A Gen Phys       Date:  1986-02

5.  Estimation of mutual information using kernel density estimators.

Authors: 
Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics       Date:  1995-09

6.  Achieving a nationwide learning health system.

Authors:  Charles P Friedman; Adam K Wong; David Blumenthal
Journal:  Sci Transl Med       Date:  2010-11-10       Impact factor: 17.956

  6 in total
  13 in total

1.  Survival Analysis with Electronic Health Record Data: Experiments with Chronic Kidney Disease.

Authors:  Yolanda Hagar; David Albers; Rimma Pivovarov; Herbert Chase; Vanja Dukic; Noémie Elhadad
Journal:  Stat Anal Data Min       Date:  2014-08-19       Impact factor: 1.051

2.  Comparing lagged linear correlation, lagged regression, Granger causality, and vector autoregression for uncovering associations in EHR data.

Authors:  Matthew E Levine; David J Albers; George Hripcsak
Journal:  AMIA Annu Symp Proc       Date:  2017-02-10

3.  Identifying and mitigating biases in EHR laboratory tests.

Authors:  Rimma Pivovarov; David J Albers; Jorge L Sepulveda; Noémie Elhadad
Journal:  J Biomed Inform       Date:  2014-04-13       Impact factor: 6.317

4.  Methodological variations in lagged regression for detecting physiologic drug effects in EHR data.

Authors:  Matthew E Levine; David J Albers; George Hripcsak
Journal:  J Biomed Inform       Date:  2018-08-30       Impact factor: 6.317

5.  Entropy-Based Discovery of Summary Causal Graphs in Time Series.

Authors:  Charles K Assaad; Emilie Devijver; Eric Gaussier
Journal:  Entropy (Basel)       Date:  2022-08-19       Impact factor: 2.738

6.  Between-day repeatability of sensor-based in-home gait assessment among older adults: assessing the effect of frailty.

Authors:  Danya Pradeep Kumar; Christopher Wendel; Jane Mohler; Kaveh Laksari; Nima Toosizadeh
Journal:  Aging Clin Exp Res       Date:  2020-09-15       Impact factor: 3.636

7.  High-throughput phenotyping with temporal sequences.

Authors:  Hossein Estiri; Zachary H Strasser; Shawn N Murphy
Journal:  J Am Med Inform Assoc       Date:  2021-03-18       Impact factor: 4.497

8.  Population physiology: leveraging electronic health record data to understand human endocrine dynamics.

Authors:  D J Albers; George Hripcsak; Michael Schmidt
Journal:  PLoS One       Date:  2012-12-14       Impact factor: 3.240

9.  Predictability Bounds of Electronic Health Records.

Authors:  Dominik Dahlem; Diego Maniloff; Carlo Ratti
Journal:  Sci Rep       Date:  2015-07-07       Impact factor: 4.379

10.  Estimating summary statistics for electronic health record laboratory data for use in high-throughput phenotyping algorithms.

Authors:  D J Albers; N Elhadad; J Claassen; R Perotte; A Goldstein; G Hripcsak
Journal:  J Biomed Inform       Date:  2018-01-31       Impact factor: 6.317

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